Peter V. Kharchenko, Ph.D.
Affiliations: | 2005 | Harvard University, Cambridge, MA, United States |
Area:
Computational GeneticsGoogle:
"Peter Kharchenko"Mean distance: 9.43 | S | N | B | C | P |
Parents
Sign in to add mentor| George M. Church | grad student | 2005 | Harvard | |
| (Local properties of metabolic networks.) | ||||
Children
Sign in to add trainee| Jean Fan | grad student | Harvard Medical School | |
| Teng Gao | grad student | Harvard Medical School (GenetiTree) | |
| Jonathan Mitchel | grad student | ||
| Ruslan Soldatov | post-doc | ||
| Xin Wang | post-doc | 2020-2021 | Harvard Medical School (Computational Biology Tree) |
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Publications
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| Kalhor K, Chen CJ, Lee HS, et al. (2024) Mapping human tissues with highly multiplexed RNA in situ hybridization. Nature Communications. 15: 2511 |
| Zhang Y, Petukhov V, Biederstedt E, et al. (2024) Gene panel selection for targeted spatial transcriptomics. Genome Biology. 25: 35 |
| Gao T, Kastriti ME, Ljungström V, et al. (2023) A pan-tissue survey of mosaic chromosomal alterations in 948 individuals. Nature Genetics. 55: 1901-1911 |
| Kalhor K, Chen CJ, Lee HS, et al. (2023) Mapping Human Tissues with Highly Multiplexed RNA in situ Hybridization. Biorxiv : the Preprint Server For Biology |
| Lake BB, Menon R, Winfree S, et al. (2023) An atlas of healthy and injured cell states and niches in the human kidney. Nature. 619: 585-594 |
| Zhang Y, Petukhov V, Biederstedt E, et al. (2023) Gene panel selection for targeted spatial transcriptomics. Biorxiv : the Preprint Server For Biology |
| Faure L, Soldatov R, Kharchenko PV, et al. (2022) scFates: a scalable python package for advanced pseudotime and bifurcation analysis from single cell data. Bioinformatics (Oxford, England) |
| Gao T, Soldatov R, Sarkar H, et al. (2022) Haplotype-aware analysis of somatic copy number variations from single-cell transcriptomes. Nature Biotechnology |
| Purroy Zuriguel N, Tong YE, Lemvigh CK, et al. (2022) Single cell analysis reveals immune dysfunction from the earliest stages of CLL that can be reversed by ibrutinib. Blood |
| Petukhov V, Xu RJ, Soldatov RA, et al. (2021) Cell segmentation in imaging-based spatial transcriptomics. Nature Biotechnology |