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Yamini Dalal, Ph.D. - Publications

Affiliations: 
Center for Cancer Research National Cancer Institute, Rockville, MD, United States 
 2003 Purdue University, West Lafayette, IN, United States 
Area:
gene regulation
Website:
https://ccr.cancer.gov/Laboratory-of-Receptor-Biology-and-Gene-Expression/yamini-dalal?qt-staff_profile_tabs=3#qt-staff_profile_tabs
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59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zhao H, Wu H, Guseman A, Abeykoon D, Camara CM, Dalal Y, Fushman D, Papoian GA. The role of cryptic ancestral symmetry in histone folding mechanisms across Eukarya and Archaea. Plos Computational Biology. 20: e1011721. PMID 38181064 DOI: 10.1371/journal.pcbi.1011721  0.832
2023 Sikder S, Baek S, McNeil T, Dalal Y. Unraveling the mechanism of centromere inactivation in human aging. Biorxiv : the Preprint Server For Biology. PMID 38313258 DOI: 10.1101/2023.12.30.573721  0.358
2023 Melters DP, Neuman KC, Bentahar RS, Rakshit T, Dalal Y. Single molecule analysis of CENP-A chromatin by high-speed atomic force microscopy. Elife. 12. PMID 37728600 DOI: 10.7554/eLife.86709  0.835
2023 Hsia CR, Melters DP, Dalal Y. The Force is Strong with This Epigenome: Chromatin Structure and Mechanobiology. Journal of Molecular Biology. 168019. PMID 37330288 DOI: 10.1016/j.jmb.2023.168019  0.822
2023 Yang N, Occean JR, Melters DP, Shi C, Wang L, Stransky S, Doyle ME, Cui CY, Delannoy M, Fan J, Slama E, Egan JM, De S, Cunningham SC, de Cabo R, ... ... Dalal Y, et al. A hyper-quiescent chromatin state formed during aging is reversed by regeneration. Molecular Cell. PMID 37116496 DOI: 10.1016/j.molcel.2023.04.005  0.763
2023 Yang N, Occean JR, Melters DP, Shi C, Wang L, Stransky S, Doyle ME, Cui CY, Delannoy M, Fan J, Slama E, Egan JM, De S, Cunningham SC, de Cabo R, ... ... Dalal Y, et al. A hyper-quiescent chromatin state formed during aging is reversed by regeneration. Biorxiv : the Preprint Server For Biology. PMID 36824822 DOI: 10.1101/2023.02.14.528512  0.763
2022 Sikder S, Arunkumar G, Melters DP, Dalal Y. Breaking the aging epigenetic barrier. Frontiers in Cell and Developmental Biology. 10: 943519. PMID 35966762 DOI: 10.3389/fcell.2022.943519  0.779
2022 Arunkumar G, Baek S, Sturgill D, Bui M, Dalal Y. Oncogenic lncRNAs alter epigenetic memory at a fragile chromosomal site in human cancer cells. Science Advances. 8: eabl5621. PMID 35235361 DOI: 10.1126/sciadv.abl5621  0.608
2021 Saha A, Dalal Y. A glitch in the snitch: the role of linker histone H1 in shaping the epigenome in normal and diseased cells. Open Biology. 11: 210124. PMID 34343462 DOI: 10.1098/rsob.210124  0.531
2021 Monserrat J, Morales Torres C, Richardson L, Wilson TS, Patel H, Domart MC, Horswell S, Song OR, Jiang M, Crawford M, Bui M, Dalal Y, Scaffidi P. Disruption of the MSL complex inhibits tumour maintenance by exacerbating chromosomal instability. Nature Cell Biology. 23: 401-412. PMID 33837287 DOI: 10.1038/s41556-021-00657-2  0.522
2021 Wu H, Dalal Y, Papoian GA. Binding Dynamics of Disordered Linker Histone H1 with a Nucleosomal Particle. Journal of Molecular Biology. 166881. PMID 33617899 DOI: 10.1016/j.jmb.2021.166881  0.677
2020 Melters DP, Dalal Y. Nano-Surveillance: Tracking Individual Molecules in a Sea of Chromatin. Journal of Molecular Biology. PMID 33221335 DOI: 10.1016/j.jmb.2020.11.019  0.846
2020 Rakshit T, Melters DP, Dimitriadis EK, Dalal Y. Mechanical properties of nucleoprotein complexes determined by nanoindentation spectroscopy. Nucleus (Austin, Tex.). 11: 264-282. PMID 32954931 DOI: 10.1080/19491034.2020.1816053  0.868
2020 Pitman M, Melters DP, Dalal Y. Job Opening for Nucleosome Mechanic: Flexibility Required. Cells. 9. PMID 32121488 DOI: 10.3390/Cells9030580  0.826
2020 Pitman M, Dalal Y, Papoian GA. Minimal Cylinder Analysis Reveals the Mechanical Properties of Oncogenic Nucleosomes. Biophysical Journal. PMID 32097625 DOI: 10.1016/J.Bpj.2020.01.042  0.864
2020 Pitman M, Dalal Y, Papoian GA, Melters DP, Rakshit T, Dimitriadis EK, Bui M. Computational Modeling of Nucleosomal Mechanics and Epigenetic Modifications Biophysical Journal. 118: 9a. DOI: 10.1016/J.Bpj.2019.11.3372  0.798
2020 Melters DP, Pitman M, Rakshit T, Dimitriadis EK, Bui M, Papoian GA, Dalal Y. A Balance Between Elastic and Rigidified CENP-A Nucleosomes Govern Centromeric Chromatin Fidelity Biophysical Journal. 118: 8a. DOI: 10.1016/J.Bpj.2019.11.3369  0.814
2019 Melters DP, Pitman M, Rakshit T, Dimitriadis EK, Bui M, Papoian GA, Dalal Y. Intrinsic elasticity of nucleosomes is encoded by histone variants and calibrated by their binding partners. Proceedings of the National Academy of Sciences of the United States of America. PMID 31712435 DOI: 10.1073/Pnas.1911880116  0.841
2019 Zhao H, Winogradoff D, Dalal Y, Papoian GA. The Oligomerization Landscape of Histones. Biophysical Journal. PMID 31005236 DOI: 10.1016/J.Bpj.2019.03.021  0.851
2019 Wu H, Dalal Y, Papoian GA. Binding Dynamics of Disordered Linker Histone H1 with a Nucleosomal Particle Biophysical Journal. 116: 70a. DOI: 10.1016/J.Bpj.2018.11.421  0.692
2019 Pitman M, Dalal Y, Papoian GA. Cenp-A Hijacks the Histone Chaperone Network in Cancer--Computational Insights Biophysical Journal. 116: 436a. DOI: 10.1016/J.Bpj.2018.11.2347  0.809
2018 Quénet D, Dalal Y. Correction: A long non-coding RNA is required for targeting centromeric protein A to the human centromere. Elife. 7. PMID 30383536 DOI: 10.7554/Elife.41593  0.758
2018 Nye J, Sturgill D, Athwal R, Dalal Y. HJURP antagonizes CENP-A mislocalization driven by the H3.3 chaperones HIRA and DAXX. Plos One. 13: e0205948. PMID 30365520 DOI: 10.1371/Journal.Pone.0205948  0.824
2018 Nye J, Melters DP, Dalal Y. The Art of War: harnessing the epigenome against cancer. F1000research. 7: 141. PMID 29479426 DOI: 10.12688/F1000Research.12833.1  0.837
2017 Bui M, Pitman M, Nuccio A, Roque S, Donlin-Asp PG, Nita-Lazar A, Papoian GA, Dalal Y. Internal modifications in the CENP-A nucleosome modulate centromeric dynamics. Epigenetics & Chromatin. 10: 17. PMID 28396698 DOI: 10.1186/S13072-017-0124-6  0.834
2017 Nuccio AG, Bui M, Dalal Y, Nita-Lazar A. Mass Spectrometry-Based Methodology for Identification of Native Histone Variant Modifications From Mammalian Tissues and Solid Tumors. Methods in Enzymology. 586: 275-290. PMID 28137567 DOI: 10.1016/Bs.Mie.2016.09.035  0.608
2017 Vlijm R, Kim SH, De Zwart PL, Dalal Y, Dekker C. The supercoiling state of DNA determines the handedness of both H3 and CENP-A nucleosomes. Nanoscale. PMID 28094382 DOI: 10.1039/C6Nr06245H  0.562
2016 Kim SH, Vlijm R, van der Torre J, Dalal Y, Dekker C. CENP-A and H3 Nucleosomes Display a Similar Stability to Force-Mediated Disassembly. Plos One. 11: e0165078. PMID 27820823 DOI: 10.1371/Journal.Pone.0165078  0.475
2016 Zhao H, Winogradoff D, Bui M, Dalal Y, Papoian GA. Promiscuous histone mis-assembly is actively prevented by chaperones. Journal of the American Chemical Society. PMID 27454815 DOI: 10.1021/Jacs.6B05355  0.829
2016 Quénet D, Sturgill D, Dalal Y. Identifying Centromeric RNAs Involved in Histone Dynamics In Vivo. Methods in Enzymology. 573: 445-66. PMID 27372766 DOI: 10.1016/Bs.Mie.2016.01.010  0.506
2016 Hyun Kim S, Vlijm R, de Zwart P, der Torre Jv, Dalal Y, Dekker C. The Handedness of Nucleosomes is Governed by the Supercoiling of DNA Biophysical Journal. 110: 70a. DOI: 10.1016/J.Bpj.2015.11.440  0.607
2015 Winogradoff D, Zhao H, Dalal Y, Papoian GA. Shearing of the CENP-A dimerization interface mediates plasticity in the octameric centromeric nucleosome. Scientific Reports. 5: 17038. PMID 26602160 DOI: 10.1038/Srep17038  0.832
2015 Melters DP, Nye J, Zhao H, Dalal Y. Chromatin Dynamics in Vivo: A Game of Musical Chairs. Genes. 6: 751-76. PMID 26262644 DOI: 10.3390/Genes6030751  0.861
2015 Athwal RK, Walkiewicz MP, Baek S, Fu S, Bui M, Camps J, Ried T, Sung MH, Dalal Y. CENP-A nucleosomes localize to transcription factor hotspots and subtelomeric sites in human cancer cells. Epigenetics & Chromatin. 8: 2. PMID 25788983 DOI: 10.1186/1756-8935-8-2  0.813
2015 Quénet D, Dalal Y. Correction: a long non-coding RNA is required for targeting centromeric protein A to the human centromere. Elife. 4. PMID 25738305 DOI: 10.7554/eLife.07239  0.747
2015 Vlijm R, Dalal Y, Dekker C. Torque Mediated Kinetics of CENP-A Nucleosomes Reveals Resilience to Tension Biophysical Journal. 108: 539a. DOI: 10.1016/J.Bpj.2014.11.2954  0.522
2015 Zhao H, Dalal Y, Papoian GA. The Binding Landscapes of the H3/H4 and CENP-A/H4 Dimers Biophysical Journal. 108: 538a. DOI: 10.1016/J.Bpj.2014.11.2949  0.784
2014 Quénet D, Dalal Y. A long non-coding RNA is required for targeting centromeric protein A to the human centromere. Elife. 3: e03254. PMID 25117489 DOI: 10.7554/Elife.03254  0.812
2014 Walkiewicz MP, Bui M, Quénet D, Dalal Y. Tracking histone variant nucleosomes across the human cell cycle using biophysical, biochemical, and cytological analyses. Methods in Molecular Biology (Clifton, N.J.). 1170: 589-615. PMID 24906339 DOI: 10.1007/978-1-4939-0888-2_34  0.856
2014 Volle C, Dalal Y. Histone variants: the tricksters of the chromatin world. Current Opinion in Genetics & Development. 25: 8-14,138. PMID 24463272 DOI: 10.1016/J.Gde.2013.11.006  0.867
2014 Walkiewicz MP, Dimitriadis EK, Dalal Y. CENP-A octamers do not confer a reduction in nucleosome height by AFM. Nature Structural & Molecular Biology. 21: 2-3. PMID 24389541 DOI: 10.1038/Nsmb.2742  0.829
2014 Volle C, Dalal Y. Addendum to: Histone variants: The tricksters of the chromatin world [Curr. Opin. Genet. Dev. 2014, 25:8-14] Current Opinion in Genetics and Development. 25: 138. DOI: 10.1016/J.Gde.2014.03.001  0.835
2013 Bui M, Walkiewicz MP, Dimitriadis EK, Dalal Y. The CENP-A nucleosome: a battle between Dr Jekyll and Mr Hyde. Nucleus (Austin, Tex.). 4: 37-42. PMID 23324462 DOI: 10.4161/Nucl.23588  0.838
2012 Quénet D, McNally JG, Dalal Y. Through thick and thin: the conundrum of chromatin fibre folding in vivo. Embo Reports. 13: 943-4. PMID 23041656 DOI: 10.1038/Embor.2012.143  0.802
2012 Quénet D, Dalal Y. The CENP-A nucleosome: a dynamic structure and role at the centromere. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 20: 465-79. PMID 22825424 DOI: 10.1007/S10577-012-9301-4  0.845
2012 Bui M, Dimitriadis EK, Hoischen C, An E, Quénet D, Giebe S, Nita-Lazar A, Diekmann S, Dalal Y. Cell-cycle-dependent structural transitions in the human CENP-A nucleosome in vivo. Cell. 150: 317-26. PMID 22817894 DOI: 10.1016/J.Cell.2012.05.035  0.871
2012 Quénet D, Walkiewicz M, Dalal Y. Chromatin at the Intersection of Disease and Therapy Toxicology and Epigenetics. 51-71. DOI: 10.1002/9781118349045.ch4  0.779
2010 Dimitriadis EK, Weber C, Gill RK, Diekmann S, Dalal Y. Tetrameric organization of vertebrate centromeric nucleosomes. Proceedings of the National Academy of Sciences of the United States of America. 107: 20317-22. PMID 21059934 DOI: 10.1073/Pnas.1009563107  0.647
2010 Ambartsumyan G, Gill RK, Perez SD, Conway D, Vincent J, Dalal Y, Clark AT. Centromere protein A dynamics in human pluripotent stem cell self-renewal, differentiation and DNA damage. Human Molecular Genetics. 19: 3970-82. PMID 20650959 DOI: 10.1093/Hmg/Ddq312  0.416
2010 Dalal Y, Bui M. Down the rabbit hole of centromere assembly and dynamics. Current Opinion in Cell Biology. 22: 392-402. PMID 20303726 DOI: 10.1016/J.Ceb.2010.02.005  0.598
2009 Dalal Y. Epigenetic specification of centromeres. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 87: 273-82. PMID 19234541 DOI: 10.1139/O08-135  0.574
2008 Wang H, Dalal Y, Henikoff S, Lindsay S. Single-epitope recognition imaging of native chromatin. Epigenetics & Chromatin. 1: 10. PMID 19091111 DOI: 10.1186/1756-8935-1-10  0.693
2007 Dalal Y, Furuyama T, Vermaak D, Henikoff S. Structure, dynamics, and evolution of centromeric nucleosomes. Proceedings of the National Academy of Sciences of the United States of America. 104: 15974-81. PMID 17893333 DOI: 10.1073/Pnas.0707648104  0.731
2007 Dalal Y, Wang H, Lindsay S, Henikoff S. Tetrameric structure of centromeric nucleosomes in interphase Drosophila cells. Plos Biology. 5: e218. PMID 17676993 DOI: 10.1371/Journal.Pbio.0050218  0.717
2006 Furuyama T, Dalal Y, Henikoff S. Chaperone-mediated assembly of centromeric chromatin in vitro. Proceedings of the National Academy of Sciences of the United States of America. 103: 6172-7. PMID 16601098 DOI: 10.1073/Pnas.0601686103  0.701
2005 Henikoff S, Dalal Y. Centromeric chromatin: what makes it unique? Current Opinion in Genetics & Development. 15: 177-84. PMID 15797200 DOI: 10.1016/J.Gde.2005.01.004  0.634
2005 Dalal Y, Fleury TJ, Cioffi A, Stein A. Long-range oscillation in a periodic DNA sequence motif may influence nucleosome array formation. Nucleic Acids Research. 33: 934-45. PMID 15716311 DOI: 10.1093/Nar/Gki224  0.732
2004 Cioffi A, Dalal Y, Stein A. DNA sequence alterations affect nucleosome array formation of the chicken ovalbumin gene. Biochemistry. 43: 6709-22. PMID 15157105 DOI: 10.1021/Bi049717F  0.744
2002 Stein A, Dalal Y, Fleury TJ. Circle ligation of in vitro assembled chromatin indicates a highly flexible structure. Nucleic Acids Research. 30: 5103-9. PMID 12466533 DOI: 10.1093/Nar/Gkf671  0.643
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