Jean-Pierre Reed, Ph.D. - Publications

2000 University of California, Santa Barbara, Santa Barbara, CA, United States 

203 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Kumar P, Adamczyk PA, Zhang X, Andrade RB, Romero PA, Ramanathan P, Reed JL. Active and machine learning-based approaches to rapidly enhance microbial chemical production. Metabolic Engineering. PMID 34229079 DOI: 10.1016/j.ymben.2021.06.009  1
2020 Ong WK, Courtney DK, Pan S, Andrade RB, Kiley PJ, Pfleger BF, Reed JL. Model-driven analysis of mutant fitness experiments improves genome-scale metabolic models of Zymomonas mobilis ZM4. Plos Computational Biology. 16: e1008137. PMID 32804944 DOI: 10.1371/Journal.Pcbi.1008137  1
2020 Reed J. Christian Smith, Religion: What It Is, How It Works, and Why It Matters. Critical Research On Religion. 205030322095287. DOI: 10.1177/2050303220952874  0.01
2020 Reed J. Elective affinities between Sandinismo (as socialist idea) and liberation theology in the Nicaraguan Revolution Critical Research On Religion. 8: 153-177. DOI: 10.1177/2050303220924110  0.01
2018 Wu W, Long MR, Zhang X, Reed JL, Maravelias CT. A framework for the identification of promising bio-based chemicals. Biotechnology and Bioengineering. PMID 29940066 DOI: 10.1002/Bit.26779  1
2018 Reed J. Ruth Braunstein, Todd Nicholas Fuist, and Rhys Williams (eds), Religion and Progressive Activism: New Stories About Faith and Politics: Critical Research On Religion. 6: 205-210. DOI: 10.1177/2050303218761145  0.01
2017 Comer AD, Long MR, Reed JL, Pfleger BF. Flux Balance Analysis Indicates that Methane Is the Lowest Cost Feedstock for Microbial Cell Factories. Metabolic Engineering Communications. 5: 26-33. PMID 28989864 DOI: 10.1016/J.Meteno.2017.07.002  1
2017 Reed J. The Bible, religious storytelling, and revolution: The case of Solentiname, Nicaragua: Critical Research On Religion. 5: 227-250. DOI: 10.1177/2050303217732130  0.01
2017 Reed J. What Went Wrong? The Nicaraguan Revolution, A Marxist Analysis, written by La Botz, Dan Comparative Sociology. 16: 815-817. DOI: 10.1163/15691330-12341447  0.01
2017 Reed J. Criticism of Earth: On Marx, Engels and Theology, written by Boer, Roland Comparative Sociology. 16: 581-583. DOI: 10.1163/15691330-12341431  0.01
2016 Long MR, Reed JL. Improving Flux Predictions by Integrating Data from Multiple Strains. Bioinformatics (Oxford, England). PMID 27998937 DOI: 10.1093/Bioinformatics/Btw706  1
2016 Yasin M, Reed JC. IMAGES IN CLINICAL MEDICINE. Diaphragmatic Hernia Causing Lung Collapse. The New England Journal of Medicine. 374: 1874. PMID 27168436 DOI: 10.1056/NEJMicm1415660  1
2016 Tobian AA, Reed J, Njeuhmeli E. An evidence-based analysis of voluntary medical male circumcision devices. Nature Reviews. Urology. PMID 27112388 DOI: 10.1038/nrurol.2016.77  1
2016 Riney LC, Reed JL, Pomerantz WJ, Kruger LL, Brody AS. In reply. Annals of Emergency Medicine. 67: 682-3. PMID 27106380 DOI: 10.1016/j.annemergmed.2016.01.017  1
2016 Simmons AB, Merrill MM, Reed JC, Deans MR, Edwards MM, Fuerst PG. Defective Angiogenesis and Intraretinal Bleeding in Mouse Models With Disrupted Inner Retinal Lamination. Investigative Ophthalmology & Visual Science. 57: 1563-77. PMID 27046121 DOI: 10.1167/Iovs.15-18395  1
2016 Matsumura H, Chakraborty S, Reed J, Lu Y, Moënne-Loccoz P. Effect of outer-sphere sidechain substitutions on the fate of the trans iron-nitrosyl dimer in heme/nonheme engineered myoglobins (FeBMbs): Insights into the mechanism of denitrifying NO reductases. Biochemistry. PMID 27003474 DOI: 10.1021/Acs.Biochem.5B01109  1
2016 Hessell AJ, Jaworski JP, Epson E, Matsuda K, Pandey S, Kahl C, Reed J, Sutton WF, Hammond KB, Cheever TA, Barnette PT, Legasse AW, Planer S, Stanton JJ, Pegu A, et al. Early short-term treatment with neutralizing human monoclonal antibodies halts SHIV infection in infant macaques. Nature Medicine. PMID 26998834 DOI: 10.1038/Nm.4063  1
2016 Zinner C, Krueger M, Reed JL, Kohl-Bareis M, Holmberg HC, Sperlich B. Exposure to a combination of heat and hyperoxia during cycling at submaximal intensity does not alter thermoregulatory responses. Biology of Sport. 33: 71-6. PMID 26929473 DOI: 10.5604/20831862.1192041  1
2016 Reed JL, Harris JM, Midence L, Yee EB, Grace SL. Evaluating the Heart Wise Exercise™ program: a model for safe community exercise programming. Bmc Public Health. 16: 190. PMID 26922240 DOI: 10.1186/s12889-016-2866-7  1
2016 Mikheikin A, Olsen A, Picco L, Payton O, Mishra B, Gimzewski JK, Reed J. High-Speed Atomic Force Microscopy Revealing Contamination in DNA Purification Systems. Analytical Chemistry. PMID 26878668 DOI: 10.1021/Acs.Analchem.5B04023  1
2016 Mortensen JL, Reed JM. Population Viability and Vital Rate Sensitivity of an Endangered Avian Cooperative Breeder, the White-Breasted Thrasher (Ramphocinclus brachyurus). Plos One. 11: e0148928. PMID 26859690 DOI: 10.1371/Journal.Pone.0148928  1
2016 Yi F, Ren M, Reed JC, Zhu H, Hou J, Naylor CH, Johnson AT, Agarwal R, Cubukcu E. Optomechanical enhancement of doubly resonant 2D optical nonlinearity. Nano Letters. PMID 26854706 DOI: 10.1021/acs.nanolett.5b04448  1
2016 Chang M, Chang M, Reed JZ, Milward D, Xu JJ, Cornell WD. Developing timely insights into comparative effectiveness research with a text-mining pipeline. Drug Discovery Today. PMID 26854423 DOI: 10.1016/J.Drudis.2016.01.012  1
2016 Zhang X, Tervo CJ, Reed JL. Metabolic Assessment of E. coli as a Biofactory for Commercial Products. Metabolic Engineering. PMID 26850742 DOI: 10.1016/J.Ymben.2016.01.007  1
2016 Winslow S, Jackson S, Cook L, Reed JW, Blakeney K, Zimbro K, Parker C. Multisite Assessment of Nursing Continuing Education Learning Needs Using an Electronic Tool. Journal of Continuing Education in Nursing. 47: 75-81. PMID 26840239 DOI: 10.3928/00220124-20160120-08  1
2016 Scheller RL, Depinet HE, Ho ML, Hornung RW, Reed JL. Utility of Pediatric Appendicitis Score in Female Adolescent Patients. Academic Emergency Medicine : Official Journal of the Society For Academic Emergency Medicine. PMID 26824846 DOI: 10.1111/acem.12916  1
2016 Boavida J, Paulo D, Aurelle D, Arnaud-Haond S, Marschal C, Reed J, Gonçalves JM, Serrão EA. A Well-Kept Treasure at Depth: Precious Red Coral Rediscovered in Atlantic Deep Coral Gardens (SW Portugal) after 300 Years. Plos One. 11: e0147228. PMID 26800449 DOI: 10.1371/Journal.Pone.0147228  1
2016 Hansen SG, Wu HL, Burwitz BJ, Hughes CM, Hammond KB, Ventura AB, Reed JS, Gilbride RM, Ainslie E, Morrow DW, Ford JC, Selseth AN, Pathak R, Malouli D, Legasse AW, et al. Broadly targeted CD8+ T cell responses restricted by major histocompatibility complex E. Science (New York, N.Y.). PMID 26797147 DOI: 10.1126/science.aac9475  1
2016 Tervo CJ, Reed JL. MapMaker and PathTracer for tracking carbon in genome-scale metabolic models. Biotechnology Journal. PMID 26771089 DOI: 10.1002/Biot.201500267  1
2016 Hoehn EF, FitzGerald MR, Bhatt SR, Robinson VM, Lippe JE, Reed JL. Do Adolescents With Higher Knowledge of HIV Have Lower Sexual Risk Behaviors? Pediatric Emergency Care. PMID 26760829 DOI: 10.1097/PEC.0000000000000612  1
2016 Chew GM, Fujita T, Webb GM, Burwitz BJ, Wu HL, Reed JS, Hammond KB, Clayton KL, Ishii N, Abdel-Mohsen M, Liegler T, Mitchell BI, Hecht FM, Ostrowski M, Shikuma CM, et al. TIGIT Marks Exhausted T Cells, Correlates with Disease Progression, and Serves as a Target for Immune Restoration in HIV and SIV Infection. Plos Pathogens. 12: e1005349. PMID 26741490 DOI: 10.1371/Journal.Ppat.1005349  1
2016 Collins CE, Turner EC, Sawyer EK, Reed JL, Young NA, Flaherty DK, Kaas JH. Cortical cell and neuron density estimates in one chimpanzee hemisphere. Proceedings of the National Academy of Sciences of the United States of America. PMID 26729880 DOI: 10.1073/Pnas.1524208113  1
2016 Zhang XS, Reed JM, Lacey JH, Francke A, Leng MJ, Levkov Z, Wagner B. Complexity of diatom response to Lateglacial and Holocene climate and environmental change in ancient, deep and oligotrophic Lake Ohrid (Macedonia and Albania) Biogeosciences. 13: 1351-1365. DOI: 10.5194/bg-13-1351-2016  1
2016 Flint PL, Reed JA, Lacroix DL, Lanctot RB. Habitat use and foraging patterns of molting male long-tailed ducks in lagoons of the central beaufort sea, Alaska Arctic. 69: 19-28. DOI: 10.14430/arctic4544  1
2016 Harshaw CR, Bridges RA, Iannacone MD, Reed JW, Goodall JR. GraphPrints: Towards a graph analytic method for network anomaly detection Proceedings of the 11th Annual Cyber and Information Security Research Conference, Cisrc 2016. DOI: 10.1145/2897795.2897806  1
2016 Bretschneider S, Reed J. Modeling of start-up from engine-off conditions using high fidelity turbofan engine simulations Journal of Engineering For Gas Turbines and Power. 138. DOI: 10.1115/1.4031474  1
2016 Reed JM, Abdallah AS, Thompson MS, MacKenzie AB, DaSilva LA. The FINS Framework: Design and Implementation of the Flexible Internetwork Stack (FINS) Framework Ieee Transactions On Mobile Computing. 15: 489-502. DOI: 10.1109/Tmc.2015.2413781  1
2016 Lichtman M, Poston JD, Amuru SD, Shahriar C, Clancy TC, Buehrer RM, Reed JH. A Communications Jamming Taxonomy Ieee Security and Privacy. 14: 47-54. DOI: 10.1109/MSP.2016.13  1
2016 Lichtman M, Jover RP, Labib M, Rao R, Marojevic V, Reed JH. LTE/LTE-a jamming, spoofing, and sniffing: Threat assessment and mitigation Ieee Communications Magazine. 54: 54-61. DOI: 10.1109/Mcom.2016.7452266  1
2016 Sohul MM, Yao M, Ma X, Imana EY, Marojevic V, Reed JH. Next generation public safety networks: A spectrum sharing approach Ieee Communications Magazine. 54: 30-36. DOI: 10.1109/Mcom.2016.7432144  1
2016 Lichtman M, Vondal MT, Clancy TC, Reed JH. Antifragile Communications Ieee Systems Journal. DOI: 10.1109/JSYST.2016.2517164  1
2016 Labib M, Marojevic V, Reed JH, Zaghloul AI. How to enhance the immunity of LTE systems against RF spoofing 2016 International Conference On Computing, Networking and Communications, Icnc 2016. DOI: 10.1109/ICCNC.2016.7440650  1
2016 Padaki AV, Tandon R, Reed JH. Efficient spectrum sharing with rf diversity: adapting to nonlinearity of front ends 2015 Ieee Global Communications Conference, Globecom 2015. DOI: 10.1109/GLOCOM.2014.7417714  1
2016 Labib M, Ha S, Saad W, Reed JH. A colonel blotto game for anti-jamming in the internet of things 2015 Ieee Global Communications Conference, Globecom 2015. DOI: 10.1109/GLOCOM.2014.7417437  1
2016 Schneider K, FitzGerald M, Byczkowski T, Reed J. Screening for Asymptomatic Gonorrhea and Chlamydia in the Pediatric Emergency Department Sexually Transmitted Diseases. DOI: 10.1097/OLQ.0000000000000424  1
2016 Hughey SM, Walsemann KM, Child S, Powers A, Reed JA, Kaczynski AT. Using an environmental justice approach to examine the relationships between park availability and quality indicators, neighborhood disadvantage, and racial/ethnic composition Landscape and Urban Planning. 148: 159-169. DOI: 10.1016/J.Landurbplan.2015.12.016  1
2016 Krueger CG, Chesmore N, Chen X, Parker J, Khoo C, Marais JPJ, Shanmuganayagam D, Crump P, Reed JD. Critical reevaluation of the 4-(dimethylamino)cinnamaldehyde assay: Cranberry proanthocyanidin standard is superior to procyanidin A2 dimer for accurate quantification of proanthocyanidins in cranberry products Journal of Functional Foods. 22: 13-19. DOI: 10.1016/j.jff.2016.01.017  1
2016 Reed JL, Dean J, Aldrich-Smith G, Clyne TW. A methodology for obtaining plasticity characteristics of metallic coatings via instrumented indentation International Journal of Solids and Structures. 80: 128-136. DOI: 10.1016/j.ijsolstr.2015.10.029  1
2016 Reed JL, Harris JM, Cotie LM, Grace SL. What do We Know about Women Versus Men Who Attend Heart Wise Exercise Sessions? Canadian Journal of Cardiology. 32: S7. DOI: 10.1016/j.cjca.2016.02.021  1
2016 Prince SA, Reed JL, Martinello N, Adamo KB, Fodor JG, Hiremath S, Kristjansson EA, Mullen KA, Nerenberg KA, Tulloch HE, Reid RD. Why do ADult Women Exercise? - A Systematic Review of Prospective Cohort Studies Canadian Journal of Cardiology. 32: S6-S7. DOI: 10.1016/j.cjca.2016.02.020  1
2016 Cotten C, Reed JL. Applications of Constraint-Based Models for Biochemical Production Biotechnology For Biofuel Production and Optimization. 201-226. DOI: 10.1016/B978-0-444-63475-7.00008-X  1
2016 Pozzulo JD, Reed J, Pettalia J, Dempsey J. Simultaneous, Sequential, Elimination, and Wildcard: A Comparison of Lineup Procedures Journal of Police and Criminal Psychology. 31: 71-80. DOI: 10.1007/s11896-015-9168-3  1
2016 Reed JP, Williams RH, Ward KB. Civil religious contention in Cairo, Illinois: priestly and prophetic ideologies in a “northern” civil rights struggle Theory and Society. 45: 25-55. DOI: 10.1007/S11186-015-9262-7  1
2016 Boavida J, Assis J, Reed J, Serrão EA, Gonçalves JMS. Comparison of small remotely operated vehicles and diver-operated video of circalittoral benthos Hydrobiologia. 766: 247-260. DOI: 10.1007/s10750-015-2459-y  1
2016 Zalin A, Papoutsi C, Shotliff K, Majeed A, Marston C, Reed J. The use of information for diabetes research and care: Patient views in West London Practical Diabetes. 33: 81-86a. DOI: 10.1002/Pdi.2008  1
2016 Grund JM, Toledo C, Davis SM, Ridzon R, Moturi E, Scobie H, Naouri B, Reed JB, Njeuhmeli E, Thomas AG, Benson FN, Sirengo MW, Muyenzi LN, Lija GJI, Rogers JH, et al. Tetanus cases after voluntary medical male circumcision for HIV prevention — Eastern and Southern Africa, 2012–2015 Morbidity and Mortality Weekly Report. 65: 36-38.  1
2015 Reed JL, Pipe AL. Practical Approaches to Prescribing Physical Activity and Monitoring Exercise Intensity. The Canadian Journal of Cardiology. PMID 26897182 DOI: 10.1016/j.cjca.2015.12.024  1
2015 Lee H, Rotolo JA, Mesicek J, Penate-Medina T, Rimner A, Liao WC, Yin X, Ragupathi G, Ehleiter D, Gulbins E, Zhai D, Reed JC, Haimovitz-Friedman A, Fuks Z, Kolesnick R. Correction: Mitochondrial Ceramide-Rich Macrodomains Functionalize Bax upon Irradiation. Plos One. 10: e0146210. PMID 26716446 DOI: 10.1371/Journal.Pone.0146210  1
2015 Awad SF, Sgaier SK, Tambatamba BC, Mohamoud YA, Lau FK, Reed JB, Njeuhmeli E, Abu-Raddad LJ. Investigating Voluntary Medical Male Circumcision Program Efficiency Gains through Subpopulation Prioritization: Insights from Application to Zambia. Plos One. 10: e0145729. PMID 26716442 DOI: 10.1371/Journal.Pone.0145729  1
2015 Reed JE, Card AJ. The problem with Plan-Do-Study-Act cycles. Bmj Quality & Safety. PMID 26700542 DOI: 10.1136/Bmjqs-2015-005076  1
2015 Tanaka M, Robinson BA, Chutiraka K, Geary CD, Reed JC, Lingappa JR. Mutations of conserved residues in the major homology region arrest assembling HIV-1 Gag as a membrane-targeted intermediate containing genomic RNA and cellular proteins. Journal of Virology. PMID 26656702 DOI: 10.1128/JVI.02698-15  1
2015 Weiler AM, Das A, Akinyosoye O, Cui S, O'Connor SL, Scheef EA, Reed JS, Panganiban AT, Sacha JB, Rakasz EG, Friedrich TC, Maness NJ. Acute viral escape selectively impairs Nef-mediated MHC-I downmodulation and increases susceptibility to antiviral T cells. Journal of Virology. PMID 26637459 DOI: 10.1128/Jvi.01975-15  1
2015 Aima M, Reed JL, DeWerd LA, Culberson WS. Air-kerma strength determination of a new directional (103)Pd source. Medical Physics. 42: 7144. PMID 26632069 DOI: 10.1118/1.4935409  1
2015 Reed JC, Reed HB. Contributions to Neuropsychology of Reitan and Associates: Neuropsychology Laboratory, Indiana University Medical Center, 1960s. Archives of Clinical Neuropsychology : the Official Journal of the National Academy of Neuropsychologists. 30: 751-3. PMID 26590076 DOI: 10.1093/arclin/acv073  1
2015 Reed JH, Gordon TP. Autoimmunity: Ro60-associated RNA takes its toll on disease pathogenesis. Nature Reviews. Rheumatology. PMID 26553602 DOI: 10.1038/nrrheum.2015.148  1
2015 Stanford JK, Spencer JC, Reed JM. Case presentation and images of a lingual osseous choristoma in a pediatric patient. American Journal of Otolaryngology. 36: 753-4. PMID 26545466 DOI: 10.1016/j.amjoto.2015.07.008  1
2015 Tobian AA, Adamu T, Reed JB, Kiggundu V, Yazdi Y, Njeuhmeli E. Voluntary medical male circumcision in resource-constrained settings. Nature Reviews. Urology. PMID 26526758 DOI: 10.1038/nrurol.2015.253  1
2015 Liao CC, Reed JL, Kaas JH, Qi HX. Intracortical connections are altered after long-standing deprivation of dorsal column inputs in the hand region of area 3b in squirrel monkeys. The Journal of Comparative Neurology. PMID 26519356 DOI: 10.1002/Cne.23921  1
2015 Milutinovic S, Kashyap AK, Yanagi T, Wimer C, Zhou S, O' Neil R, Kurtzman AL, Faynboym A, Xu L, Hannum CH, Diaz PW, Matsuzawa SI, Horowitz M, Horowitz L, Bhatt RR, Reed JC, et al. Dual agonist SurrobodyTM simultaneously activates death receptors DR4 and DR5 to induce cancer cell death. Molecular Cancer Therapeutics. PMID 26516157 DOI: 10.1158/1535-7163.Mct-15-0400  1
2015 Lisak D, Schacht T, Gawlitza A, Albrecht P, Aktas O, Koop B, Gliem M, Hofstetter HH, Zanger K, Bultynck G, Parys JB, De Smedt H, Kindler T, Adams-Quack P, Hahn M, ... Reed JC, et al. BAX inhibitor-1 is a Ca(2+) channel critically important for immune cell function and survival. Cell Death and Differentiation. PMID 26470731 DOI: 10.1038/Cdd.2015.115  1
2015 Park JW, Reed JR, Backes WL. The Localization of Cytochrome P450s CYP1A1 and CYP1A2 into Different Lipid Microdomains is Governed by their NH2-terminal and Internal Protein Regions. The Journal of Biological Chemistry. PMID 26468279 DOI: 10.1074/jbc.M115.687103  1
2015 Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL, Dräger A, Famili I, Feist AM, Fleming RM, Fong SS, Hatzimanikatis V, Herrgård MJ, Holder A, Hucka M, ... Reed JL, et al. Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 11: 831. PMID 26467284 DOI: 10.15252/Msb.20156157  0.01
2015 Papoutsi C, Reed JE, Marston C, Lewis R, Majeed A, Bell D. Patient and public views about the security and privacy of Electronic Health Records (EHRs) in the UK: results from a mixed methods study. Bmc Medical Informatics and Decision Making. 15: 86. PMID 26466787 DOI: 10.1186/S12911-015-0202-2  1
2015 Clancy RM, Markham AJ, Reed JH, Blumenberg M, Halushka MK, Buyon JP. Targeting downstream transcription factors and epigenetic modifications following Toll-like receptor 7/8 ligation to forestall tissue injury in anti-Ro60 associated heart block. Journal of Autoimmunity. PMID 26432597 DOI: 10.1016/J.Jaut.2015.09.003  1
2015 Reed JR, Dela Cruz AL, Lomnicki SM, Backes WL. Environmentally persistent free radical-containing particulate matter competitively inhibits metabolism by cytochrome P450 1A2. Toxicology and Applied Pharmacology. 289: 223-230. PMID 26423927 DOI: 10.1016/j.taap.2015.09.021  1
2015 Yang Z, Wilkie-Grantham RP, Yanagi T, Shu CW, Matsuzawa SI, Reed JC. ATG4B (Autophagin-1) phosphorylation modulates autophagy. The Journal of Biological Chemistry. PMID 26378241 DOI: 10.1074/jbc.M115.658088  1
2015 Prince SA, Reed JL, Mark AE, Blanchard CM, Grace SL, Reid RD. A Comparison of Accelerometer Cut-Points among Individuals with Coronary Artery Disease. Plos One. 10: e0137759. PMID 26361345 DOI: 10.1371/journal.pone.0137759  1
2015 Bock NN, Emerson RC, Reed JB, Nkambule R, Donnell DJ, Bicego GT, Okello V, Philip NM, Ehrenkranz PD, Duong YT, Moore JS, Justman JE. Changing antiretroviral eligibility criteria: impact on the number and proportion of adults requiring treatment in Swaziland. Journal of Acquired Immune Deficiency Syndromes (1999). PMID 26361174 DOI: 10.1097/QAI.0000000000000846  1
2015 Chakraborty S, Polen MA, Chacón KN, Wilson TD, Yu Y, Reed J, Nilges MJ, Blackburn NJ, Lu Y. Binuclear CuA Formation in Biosynthetic Models of CuA in Azurin Proceeds via a Novel Cu(Cys)2His Mononuclear Copper Intermediate. Biochemistry. PMID 26352296 DOI: 10.1021/Acs.Biochem.5B00659  1
2015 Reed JJ, Puckett RT, Gold RE. Induced Effects on Red Imported Fire Ant (Hymenoptera: Formicidae) Forager Size Ratios by Pseudacteon spp. (Diptera: Phoridae): Implications on Bait Size Selection. Environmental Entomology. 44: 1407-16. PMID 26314020 DOI: 10.1093/ee/nvv118  1
2015 Chakraborty S, Reed J, Sage JT, Branagan NC, Petrik ID, Miner KD, Hu MY, Zhao J, Alp EE, Lu Y. Recent Advances in Biosynthetic Modeling of Nitric Oxide Reductases and Insights Gained from Nuclear Resonance Vibrational and Other Spectroscopic Studies. Inorganic Chemistry. PMID 26274098 DOI: 10.1021/Acs.Inorgchem.5B01105  1
2015 Rong J, Pass I, Diaz PW, Ngo TA, Sauer M, Magnuson G, Zeng FY, Hassig CA, Jackson MR, Cosford ND, Matsuzawa SI, Reed JC. Cell-Based High-Throughput Luciferase Reporter Gene Assays for Identifying and Profiling Chemical Modulators of Endoplasmic Reticulum Signaling Protein, IRE1. Journal of Biomolecular Screening. PMID 26265713 DOI: 10.1177/1087057115600414  1
2015 Hamilton JJ, Calixto Contreras M, Reed JL. Thermodynamics and H2 Transfer in a Methanogenic, Syntrophic Community. Plos Computational Biology. 11: e1004364. PMID 26147299 DOI: 10.1371/Journal.Pcbi.1004364  1
2015 Reed JR, Yates BC, Houfek J, Briner W, Schmid KK, Pullen CH. Motivational Factors Predict Weight Loss in Rural Adults. Public Health Nursing (Boston, Mass.). PMID 26105202 DOI: 10.1111/Phn.12213  1
2015 D'Osualdo A, Anania VG, Yu K, Lill JR, Kaufman RJ, Matsuzawa S, Reed JC. Transcription Factor ATF4 Induces NLRP1 Inflammasome Expression during Endoplasmic Reticulum Stress. Plos One. 10: e0130635. PMID 26086088 DOI: 10.1371/Journal.Pone.0130635  1
2015 Pan R, Ruvolo VR, Wei J, Konopleva M, Reed JC, Pellecchia M, Andreeff M, Ruvolo PP. Inhibition of Mcl-1 with the pan-Bcl-2 family inhibitor (-)BI97D6 overcomes ABT-737 resistance in acute myeloid leukemia. Blood. PMID 26045609 DOI: 10.1182/Blood-2014-10-604975  1
2015 Speach DP, Lee DJ, Reed JD, Palmer BA, Abt P, Elfar JC. Is medial elbow pain correlated with cubital tunnel syndrome? An electrodiagnostic study. Muscle & Nerve. PMID 26032904 DOI: 10.1002/mus.24719  1
2015 Gaupp R, Lei S, Reed JM, Peisker H, Boyle-Vavra S, Bayer AS, Bischoff M, Herrmann M, Daum RS, Powers R, Somerville GA. Staphylococcus aureus Metabolic Adaptations during the Transition from a Daptomycin Susceptibility Phenotype to a Daptomycin Nonsusceptibility Phenotype. Antimicrobial Agents and Chemotherapy. 59: 4226-38. PMID 25963986 DOI: 10.1128/Aac.00160-15  1
2015 Bromberg DJ, Reed J, Gill JA. Microscopic colitis that is not so microscopic. International Journal of Colorectal Disease. PMID 25922142 DOI: 10.1007/s00384-015-2214-x  1
2015 Qiao S, Dennis M, Song X, Vadysirisack DD, Salunke D, Nash Z, Yang Z, Liesa M, Yoshioka J, Matsuzawa S, Shirihai OS, Lee RT, Reed JC, Ellisen LW. A REDD1/TXNIP pro-oxidant complex regulates ATG4B activity to control stress-induced autophagy and sustain exercise capacity. Nature Communications. 6: 7014. PMID 25916556 DOI: 10.1038/Ncomms8014  1
2015 Ramey AM, Schmutz JA, Reed JA, Fujita G, Scotton BD, Casler B, Fleskes JP, Konishi K, Uchida K, Yabsley MJ. Evidence for intercontinental parasite exchange through molecular detection and characterization of haematozoa in northern pintails (Anas acuta) sampled throughout the North Pacific Basin. International Journal For Parasitology. Parasites and Wildlife. 4: 11-21. PMID 25830100 DOI: 10.1016/j.ijppaw.2014.12.004  1
2015 Reed JR, dela Cruz AL, Lomnicki SM, Backes WL. Inhibition of cytochrome P450 2B4 by environmentally persistent free radical-containing particulate matter. Biochemical Pharmacology. 95: 126-32. PMID 25817938 DOI: 10.1016/j.bcp.2015.03.012  1
2015 Yanagi T, Shi R, Aza-Blanc P, Reed JC, Matsuzawa S. PCTAIRE1-knockdown sensitizes cancer cells to TNF family cytokines. Plos One. 10: e0119404. PMID 25790448 DOI: 10.1371/journal.pone.0119404  1
2015 Zakirova Z, Tweed M, Crynen G, Reed J, Abdullah L, Nissanka N, Mullan M, Mullan MJ, Mathura V, Crawford F, Ait-Ghezala G. Gulf War agent exposure causes impairment of long-term memory formation and neuropathological changes in a mouse model of Gulf War Illness. Plos One. 10: e0119579. PMID 25785457 DOI: 10.1371/Journal.Pone.0119579  1
2015 Reed JC, Zhu AY, Zhu H, Yi F, Cubukcu E. Wavelength tunable microdisk cavity light source with a chemically enhanced MoS2 emitter. Nano Letters. 15: 1967-71. PMID 25723816 DOI: 10.1021/Nl5048303  1
2015 Reed JR, Yates BC, Houfek J, Pullen CH, Briner W, Schmid KK. Eating Self-Regulation in Overweight and Obese Adults: A Concept Analysis. Nursing Forum. PMID 25611400 DOI: 10.1111/Nuf.12125  1
2015 Long MR, Ong WK, Reed JL. Computational methods in metabolic engineering for strain design. Current Opinion in Biotechnology. 34: 135-141. PMID 25576846 DOI: 10.1016/J.Copbio.2014.12.019  1
2015 Kunz H, Bishop NC, Spielmann G, Pistillo M, Reed J, Ograjsek T, Park Y, Mehta SK, Pierson DL, Simpson RJ. Fitness level impacts salivary antimicrobial protein responses to a single bout of cycling exercise. European Journal of Applied Physiology. 115: 1015-27. PMID 25557386 DOI: 10.1007/S00421-014-3082-8  1
2015 Zou H, Limpert AS, Zou J, Dembo A, Lee PS, Grant D, Ardecky R, Pinkerton AB, Magnuson GK, Goldman ME, Rong J, Teriete P, Sheffler DJ, Reed JC, Cosford ND. Benzodiazepinone derivatives protect against endoplasmic reticulum stress-mediated cell death in human neuronal cell lines. Acs Chemical Neuroscience. 6: 464-75. PMID 25544056 DOI: 10.1021/Cn500297V  1
2015 Reichert M, Zhao P, Reed JM, Ensley TR, Hagan DJ, Van Stryland EW. Beam deflection measurement of boundelectronic and rotational nonlinear refraction in molecular gases Optics Express. 23: 22224-22237. DOI: 10.1364/OE.23.022224  1
2015 Wagner RN, Reed JC, Chanda SK. HIV-1 protease cleaves the serine-threonine kinases RIPK1 and RIPK2 Retrovirology. 12. DOI: 10.1186/s12977-015-0200-6  1
2015 Grandemange S, Sanchez E, Louis-Plence P, Rittore C, Reed JC, Touitou I, Geneviève D. NLRP1 mutations cause autoinflammatory diseases in human Pediatric Rheumatology. DOI: 10.1186/1546-0096-13-S1-O22  1
2015 Reed J. Social Movement Subjectivity: Culture, Emotions, and Stories: Critical Sociology. 41: 935-950. DOI: 10.1177/0896920514524607  0.01
2015 Kim DNH, Teitell MA, Reed J, Zangle TA. Hybrid random walk-linear discriminant analysis method for unwrapping quantitative phase microscopy images of biological samples Journal of Biomedical Optics. 20. DOI: 10.1117/1.JBO.20.11.111211  1
2015 Reed JP, Pitcher S. Religion and Revolutionary We-Ness: Religious Discourse, Speech Acts, and Collective Identity in Prerevolutionary Nicaragua Journal For the Scientific Study of Religion. 54: 477-500. DOI: 10.1111/Jssr.12213  1
2015 Garlapati S, Kuruganti T, Buehrer MR, Reed JH. SMAC: A Soft MAC to Reduce Control Overhead and Latency in CDMA-Based AMI Networks Ieee/Acm Transactions On Networking. DOI: 10.1109/Tnet.2015.2481718  1
2015 Ludois DC, Reed JK. Brushless Mitigation of Bearing Currents in Electric Machines Via Capacitively Coupled Shunting Ieee Transactions On Industry Applications. 51: 3783-3790. DOI: 10.1109/Tia.2015.2434795  1
2015 Krier JR, Norko MC, Reed JT, Baxley RJ, Lanterman AD, Xiaoli M, Barry JR. Performance bounds for an OFDM-based joint radar and communications system Proceedings - Ieee Military Communications Conference Milcom. 2015: 511-516. DOI: 10.1109/MILCOM.2015.7357494  1
2015 Lichtman M, Reed JH. Anomaly-based intrusion detection of protocol-aware jamming Proceedings - Ieee Military Communications Conference Milcom. 2015: 269-274. DOI: 10.1109/MILCOM.2015.7357454  1
2015 Sohul MM, Yao M, Yang T, Reed JH. Spectrum access system for the citizen broadband radio service Ieee Communications Magazine. 53: 18-25. DOI: 10.1109/Mcom.2015.7158261  1
2015 Robert M, Sun Y, Goodwin T, Turner H, Reed JH, White J. Software frameworks for SDR Proceedings of the Ieee. 103: 452-475. DOI: 10.1109/JPROC.2015.2391176  1
2015 Yeh RT, Mittermeir R, Roussopoulos N, Reed J. A programming environment framework based on reusability Proceedings - International Conference On Data Engineering. 2015: 277-280. DOI: 10.1109/ICDE.1984.7271282  1
2015 Ullah A, Bhattarai S, Park JM, Reed JH, Gurney D, Bahrak B. Multi-tier exclusion zones for dynamic spectrum sharing Ieee International Conference On Communications. 2015: 7659-7664. DOI: 10.1109/ICC.2015.7249551  1
2015 Ahmed Y, Reed JH. An Efficient Implementation of Young's Fading Simulator Proceedings - 12th International Conference On Frontiers of Information Technology, Fit 2014. 144-148. DOI: 10.1109/FIT.2014.35  1
2015 Yuan X, Tian F, Hou YT, Lou W, Sherali HD, Kompella S, Reed JH. Optimal throughput curve for primary and secondary users with node-level cooperation 2015 Ieee International Symposium On Dynamic Spectrum Access Networks, Dyspan 2015. 358-364. DOI: 10.1109/DySPAN.2015.7343931  1
2015 Bhattarai S, Ullah A, Park JMJ, Reed JH, Gurney D, Gao B. Defining incumbent protection zones on the fly: Dynamic boundaries for spectrum sharing 2015 Ieee International Symposium On Dynamic Spectrum Access Networks, Dyspan 2015. 251-262. DOI: 10.1109/DySPAN.2015.7343908  1
2015 Amanna A, Ali D, Fitch DG, Reed JH. Design of experiments based empirical models to support cognitive radio decision making 2015 Ieee Symposium On Computational Intelligence For Security and Defense Applications, Cisda 2015 - Proceedings. 47-53. DOI: 10.1109/CISDA.2015.7208627  1
2015 Lapointe MA, Bauer CM, Ebensperger LA, Reed JM, Romero LM. Livetrapping is not biased by the endocrine stress response: A preliminary study in the degu (Octodon degus) Journal of Mammalogy. 96: 762-771. DOI: 10.1093/Jmammal/Gyv081  1
2015 Brandriet A, Reed JJ, Holme T. A Historical Investigation into Item Formats of ACS Exams and Their Relationships to Science Practices Journal of Chemical Education. 92: 1798-1806. DOI: 10.1021/Acs.Jchemed.5B00459  1
2015 Hughey SM, Reed JA, Kaczynski AT. Demographic differences in reported reasons for non-use of a prominent community trail Journal of Outdoor Recreation and Tourism. 10: 78-83. DOI: 10.1016/j.jort.2015.06.011  1
2015 Riordan F, Papoutsi C, Reed JE, Marston C, Bell D, Majeed A. Patient and public attitudes towards informed consent models and levels of awareness of Electronic Health Records in the UK International Journal of Medical Informatics. 84: 237-247. DOI: 10.1016/j.ijmedinf.2015.01.008  1
2015 Reed JS. David Martin: The Education of David Martin: The Making of an Unlikely Sociologist: London: SPCK Press, 2014. 251 pp. $25.99. ISBN: 978-1573834957 Society. DOI: 10.1007/s12115-015-9938-7  1
2015 Lacey JH, Leng MJ, Höbig N, Reed JM, Valero-Garcés B, Reicherter K. Western Mediterranean climate and environment since Marine Isotope Stage 3: a 50,000-year record from Lake Banyoles, Spain Journal of Paleolimnology. 1-16. DOI: 10.1007/s10933-015-9868-9  1
2015 Lichtman M, Reed JH. Analysis of reactive jamming against satellite communications International Journal of Satellite Communications and Networking. DOI: 10.1002/Sat.1111  1
2015 Reed JC, Zhu AY, Zhu H, Cubukcu E. Microdisk cavity-coupled MoS2 with tunable narrowband emission Conference On Lasers and Electro-Optics Europe - Technical Digest. 2015.  1
2014 Tervo CJ, Reed JL. Expanding Metabolic Engineering Algorithms Using Feasible Space and Shadow Price Constraint Modules. Metabolic Engineering Communications. 1: 1-11. PMID 25478320 DOI: 10.1016/J.Meteno.2014.06.001  1
2014 Prince SA, Reed JL, Nerenberg KA, Kristjansson EA, Hiremath S, Adamo KB, Tulloch HE, Mullen KA, Fodor JG, Wright E, Reid RD. Intrapersonal, social and physical environmental determinants of moderate-to-vigorous physical activity in working-age women: a systematic review protocol. Systematic Reviews. 3: 132. PMID 25370736 DOI: 10.1186/2046-4053-3-132  1
2014 Liao CC, Qi HX, Reed JL, Miller DJ, Kaas JH. Congenital foot deformation alters the topographic organization in the primate somatosensory system. Brain Structure & Function. PMID 25326245 DOI: 10.1007/S00429-014-0913-7  1
2014 Zhang X, Reed JL. Adaptive evolution of synthetic cooperating communities improves growth performance. Plos One. 9: e108297. PMID 25299364 DOI: 10.1371/Journal.Pone.0108297  1
2014 Kim J, Reed JL. Refining metabolic models and accounting for regulatory effects. Current Opinion in Biotechnology. 29: 34-8. PMID 24632483 DOI: 10.1016/J.Copbio.2014.02.009  1
2014 Ong WK, Vu TT, Lovendahl KN, Llull JM, Serres MH, Romine MF, Reed JL. Comparisons of Shewanella strains based on genome annotations, modeling, and experiments. Bmc Systems Biology. 8: 31. PMID 24621294 DOI: 10.1186/1752-0509-8-31  1
2014 McAllister MJ, Hammond KG, Schilling BK, Ferreria LC, Reed JP, Weiss LW. Muscle activation during various hamstring exercises. Journal of Strength and Conditioning Research / National Strength & Conditioning Association. 28: 1573-80. PMID 24149748 DOI: 10.1519/Jsc.0000000000000302  1
2014 Hamilton JJ, Reed JL. Software platforms to facilitate reconstructing genome-scale metabolic networks. Environmental Microbiology. 16: 49-59. PMID 24148076 DOI: 10.1111/1462-2920.12312  1
2014 Hoffmann JJ, Reed JP, Leiting K, Chiang CY, Stone MH. Repeated sprints, high-intensity interval training, small-sided games: theory and application to field sports. International Journal of Sports Physiology and Performance. 9: 352-7. PMID 23751941 DOI: 10.1123/ijspp.2013-0189  1
2014 Morton TAL, Thorn A, Reed JM, Van Driesche RG, Casagrande RA, Chew FS. Modeling the decline and potential recovery of a native butterfly following serial invasions by exotic species Biological Invasions. DOI: 10.1007/S10530-014-0826-7  1
2013 Tervo CJ, Reed JL. BioMog: a computational framework for the de novo generation or modification of essential biomass components. Plos One. 8: e81322. PMID 24339916 DOI: 10.1371/Journal.Pone.0081322  1
2013 Hamilton JJ, Dwivedi V, Reed JL. Quantitative assessment of thermodynamic constraints on the solution space of genome-scale metabolic models. Biophysical Journal. 105: 512-22. PMID 23870272 DOI: 10.1016/J.Bpj.2013.06.011  1
2013 Baumler DJ, Ma B, Reed JL, Perna NT. Inferring ancient metabolism using ancestral core metabolic models of enterobacteria. Bmc Systems Biology. 7: 46. PMID 23758866 DOI: 10.1186/1752-0509-7-46  1
2013 Cotten C, Reed JL. Constraint-based strain design using continuous modifications (CosMos) of flux bounds finds new strategies for metabolic engineering. Biotechnology Journal. 8: 595-604. PMID 23703951 DOI: 10.1002/Biot.201200316  1
2013 Vu TT, Hill EA, Kucek LA, Konopka AE, Beliaev AS, Reed JL. Computational evaluation of Synechococcus sp. PCC 7002 metabolism for chemical production. Biotechnology Journal. 8: 619-30. PMID 23613453 DOI: 10.1002/Biot.201200315  1
2013 Reed JP, Devlin D, Esteves SR, Dinsdale R, Guwy AJ. Integration of NIRS and PCA techniques for the process monitoring of a sewage sludge anaerobic digester. Bioresource Technology. 133: 398-404. PMID 23454801 DOI: 10.1016/j.biortech.2013.01.083  0.01
2013 Cotten C, Reed JL. Mechanistic analysis of multi-omics datasets to generate kinetic parameters for constraint-based metabolic models. Bmc Bioinformatics. 14: 32. PMID 23360254 DOI: 10.1186/1471-2105-14-32  1
2013 Reed JP, Schilling BK, Murlasits Z. Acute neuromuscular and metabolic responses to concurrent endurance and resistance exercise. Journal of Strength and Conditioning Research / National Strength & Conditioning Association. 27: 793-801. PMID 22643135 DOI: 10.1519/Jsc.0B013E31825C2D3E  1
2013 Reed J. Theorist of Subaltern Subjectivity: Antonio Gramsci, Popular Beliefs, Political Passion, and Reciprocal Learning: Critical Sociology. 39: 561-591. DOI: 10.1177/0896920512437391  0.01
2013 Reed J. Religion as Custom and Political Resistance: An Unorthodox Interpretation of EP Thompson’s The Making of the English Working Class Critical Sociology. 39: 239-258. DOI: 10.1177/0896920511410330  0.01
2012 McCarthy CG, Canale RE, Alleman RJ, Reed JP, Bloomer RJ. Biochemical and anthropometric effects of a weight loss dietary supplement in healthy men and women. Nutrition and Metabolic Insights. 5: 13-22. PMID 23882144 DOI: 10.4137/NMI.S8566  0.01
2012 Tervo CJ, Reed JL. FOCAL: an experimental design tool for systematizing metabolic discoveries and model development. Genome Biology. 13: R116. PMID 23236964 DOI: 10.1186/Gb-2012-13-12-R116  1
2012 Kim J, Reed JL. RELATCH: relative optimality in metabolic networks explains robust metabolic and regulatory responses to perturbations. Genome Biology. 13: R78. PMID 23013597 DOI: 10.1186/Gb-2012-13-9-R78  1
2012 Reed JL. Shrinking the metabolic solution space using experimental datasets. Plos Computational Biology. 8: e1002662. PMID 22956899 DOI: 10.1371/Journal.Pcbi.1002662  1
2012 Welch JS, Ley TJ, Link DC, Miller CA, Larson DE, Koboldt DC, Wartman LD, Lamprecht TL, Liu F, Xia J, Kandoth C, Fulton RS, McLellan MD, Dooling DJ, Wallis JW, ... ... Reed JP, et al. The origin and evolution of mutations in acute myeloid leukemia. Cell. 150: 264-78. PMID 22817890 DOI: 10.1016/J.Cell.2012.06.023  1
2012 Hamilton JJ, Reed JL. Identification of functional differences in metabolic networks using comparative genomics and constraint-based models. Plos One. 7: e34670. PMID 22666308 DOI: 10.1371/Journal.Pone.0034670  1
2012 Vu TT, Stolyar SM, Pinchuk GE, Hill EA, Kucek LA, Brown RN, Lipton MS, Osterman A, Fredrickson JK, Konopka AE, Beliaev AS, Reed JL. Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142. Plos Computational Biology. 8: e1002460. PMID 22529767 DOI: 10.1371/Journal.Pcbi.1002460  1
2012 Schellenberger J, Zielinski DC, Choi W, Madireddi S, Portnoy V, Scott DA, Reed JL, Osterman AL, Palsson B. Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling. Bmc Systems Biology. 6: 9. PMID 22289253 DOI: 10.1186/1752-0509-6-9  1
2011 Baumler DJ, Peplinski RG, Reed JL, Glasner JD, Perna NT. The evolution of metabolic networks of E. coli. Bmc Systems Biology. 5: 182. PMID 22044664 DOI: 10.1186/1752-0509-5-182  1
2011 Pinchuk GE, Geydebrekht OV, Hill EA, Reed JL, Konopka AE, Beliaev AS, Fredrickson JK. Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions. Applied and Environmental Microbiology. 77: 8234-40. PMID 21965410 DOI: 10.1128/Aem.05382-11  1
2011 Kim J, Reed JL, Maravelias CT. Large-scale bi-level strain design approaches and mixed-integer programming solution techniques. Plos One. 6: e24162. PMID 21949695 DOI: 10.1371/Journal.Pone.0024162  1
2011 Imam S, Yilmaz S, Sohmen U, Gorzalski AS, Reed JL, Noguera DR, Donohue TJ. iRsp1095: a genome-scale reconstruction of the Rhodobacter sphaeroides metabolic network. Bmc Systems Biology. 5: 116. PMID 21777427 DOI: 10.1186/1752-0509-5-116  1
2011 Reed JP, Devlin D, Esteves SR, Dinsdale R, Guwy AJ. Performance parameter prediction for sewage sludge digesters using reflectance FT-NIR spectroscopy. Water Research. 45: 2463-72. PMID 21377184 DOI: 10.1016/j.watres.2011.01.027  0.01
2011 Thiele I, Hyduke DR, Steeb B, Fankam G, Allen DK, Bazzani S, Charusanti P, Chen FC, Fleming RM, Hsiung CA, De Keersmaecker SC, Liao YC, Marchal K, Mo ML, Özdemir E, ... Reed JL, et al. A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. Bmc Systems Biology. 5: 8. PMID 21244678 DOI: 10.1186/1752-0509-5-8  1
2011 Chen X, Alonso AP, Allen DK, Reed JL, Shachar-Hill Y. Synergy between (13)C-metabolic flux analysis and flux balance analysis for understanding metabolic adaptation to anaerobiosis in E. coli. Metabolic Engineering. 13: 38-48. PMID 21129495 DOI: 10.1016/J.Ymben.2010.11.004  1
2011 Reed J. The Structural and Political Roots of Antineoliberalism: The Rise of the New Left in Latin America Identities-Global Studies in Culture and Power. 18: 392-414. DOI: 10.1080/1070289X.2011.654735  0.01
2011 Kim J, Reed JL, Maravelias CT. Microbial Strain Design for Biochemical Production Using Mixed-integer Programming Techniques Computer Aided Chemical Engineering. 29: 1306-1310. DOI: 10.1016/B978-0-444-54298-4.50040-4  1
2010 Reed JL, Senger RS, Antoniewicz MR, Young JD. Computational approaches in metabolic engineering. Journal of Biomedicine & Biotechnology. 2010: 207414. PMID 21584279 DOI: 10.1155/2010/207414  1
2010 Ley TJ, Ding L, Walter MJ, McLellan MD, Lamprecht T, Larson DE, Kandoth C, Payton JE, Baty J, Welch J, Harris CC, Lichti CF, Townsend RR, Fulton RS, Dooling DJ, ... ... Reed JP, et al. DNMT3A mutations in acute myeloid leukemia. The New England Journal of Medicine. 363: 2424-33. PMID 21067377 DOI: 10.1056/Nejmoa1005143  1
2010 Barua D, Kim J, Reed JL. An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models. Plos Computational Biology. 6: e1000970. PMID 21060853 DOI: 10.1371/Journal.Pcbi.1000970  1
2010 Reed JP, Uchoa B, Joe YI, Gan Y, Casa D, Fradkin E, Abbamonte P. The effective fine-structure constant of freestanding graphene measured in graphite. Science (New York, N.Y.). 330: 805-8. PMID 21051634 DOI: 10.1126/Science.1190920  1
2010 Pinchuk GE, Hill EA, Geydebrekht OV, De Ingeniis J, Zhang X, Osterman A, Scott JH, Reed SB, Romine MF, Konopka AE, Beliaev AS, Fredrickson JK, Reed JL. Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation. Plos Computational Biology. 6: e1000822. PMID 20589080 DOI: 10.1371/Journal.Pcbi.1000822  1
2010 Kim J, Reed JL. OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains. Bmc Systems Biology. 4: 53. PMID 20426856 DOI: 10.1186/1752-0509-4-53  1
2010 Abbamonte P, Wong GC, Cahill DG, Reed JP, Coridan RH, Schmidt NW, Lai GH, Joe YI, Casa D. Ultrafast imaging and the phase problem for inelastic X-ray scattering. Advanced Materials (Deerfield Beach, Fla.). 22: 1141-7. PMID 20401938 DOI: 10.1002/Adma.200904098  1
2010 Reed J. Guerrillas: War and Peace in Central America - by Kruijt, D. Bulletin of Latin American Research. 29: 384-385. DOI: 10.1111/J.1470-9856.2010.00390.X  0.01
2010 Reed J. Revolution, Revival, and Religious Conflict in Sandinista Nicaragua Religion, State and Society. 38: 181-185. DOI: 10.1080/09637491003726703  0.01
2009 Reed JL. Descriptive and predictive applications of constraint-based metabolic models. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 5460-3. PMID 19964681 DOI: 10.1109/IEMBS.2009.5334064  1
2009 Raghunathan A, Reed J, Shin S, Palsson B, Daefler S. Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction Bmc Systems Biology. 3. PMID 19356237 DOI: 10.1186/1752-0509-3-38  1
2008 Abbamonte P, Graber T, Reed JP, Smadici S, Yeh CL, Shukla A, Rueff JP, Ku W. Dynamical reconstruction of the exciton in LiF with inelastic x-ray scattering. Proceedings of the National Academy of Sciences of the United States of America. 105: 12159-63. PMID 18711146 DOI: 10.1073/Pnas.0801623105  1
2008 Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JL, Saffarini DA, Serres MH, Spormann AM, et al. Towards environmental systems biology of Shewanella. Nature Reviews. Microbiology. 6: 592-603. PMID 18604222 DOI: 10.1038/Nrmicro1947  1
2007 Resendis-Antonio O, Reed JL, Encarnación S, Collado-Vides J, Palsson BØ. Metabolic reconstruction and modeling of nitrogen fixation in Rhizobium etli. Plos Computational Biology. 3: 1887-95. PMID 17922569 DOI: 10.1371/Journal.Pcbi.0030192  1
2007 Reed J, Volo LBd. Introduction: Cultural Practices in the Making of Oppositional Politics: Critical Sociology. 33: 619-625. DOI: 10.1163/156916307X210964  0.01
2006 Reed JL, Patel TR, Chen KH, Joyce AR, Applebee MK, Herring CD, Bui OT, Knight EM, Fong SS, Palsson BO. Systems approach to refining genome annotation. Proceedings of the National Academy of Sciences of the United States of America. 103: 17480-4. PMID 17088549 DOI: 10.1073/Pnas.0603364103  1
2006 Joyce AR, Reed JL, White A, Edwards R, Osterman A, Baba T, Mori H, Lesely SA, Palsson BØ, Agarwalla S. Experimental and computational assessment of conditionally essential genes in Escherichia coli. Journal of Bacteriology. 188: 8259-71. PMID 17012394 DOI: 10.1128/Jb.00740-06  1
2006 Reed JL, Famili I, Thiele I, Palsson BO. Towards multidimensional genome annotation. Nature Reviews. Genetics. 7: 130-41. PMID 16418748 DOI: 10.1038/Nrg1769  1
2005 Barrett CL, Herring CD, Reed JL, Palsson BO. The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states. Proceedings of the National Academy of Sciences of the United States of America. 102: 19103-8. PMID 16357206 DOI: 10.1073/Pnas.0505231102  1
2004 Papin JA, Reed JL, Palsson BO. Hierarchical thinking in network biology: the unbiased modularization of biochemical networks. Trends in Biochemical Sciences. 29: 641-7. PMID 15544950 DOI: 10.1016/J.Tibs.2004.10.001  1
2004 Price ND, Reed JL, Palsson BØ. Genome-scale models of microbial cells: evaluating the consequences of constraints. Nature Reviews. Microbiology. 2: 886-97. PMID 15494745 DOI: 10.1038/Nrmicro1023  1
2004 Reed JL, Palsson BØ. Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states. Genome Research. 14: 1797-805. PMID 15342562 DOI: 10.1101/Gr.2546004  1
2004 Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO. Integrating high-throughput and computational data elucidates bacterial networks. Nature. 429: 92-6. PMID 15129285 DOI: 10.1038/Nature02456  1
2003 Price ND, Reed JL, Papin JA, Wiback SJ, Palsson BO. Network-based analysis of metabolic regulation in the human red blood cell. Journal of Theoretical Biology. 225: 185-94. PMID 14575652 DOI: 10.1016/S0022-5193(03)00237-6  1
2003 Reed JL, Vo TD, Schilling CH, Palsson BO. An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Genome Biology. 4: R54. PMID 12952533 DOI: 10.1186/Gb-2003-4-9-R54  1
2003 Reed JL, Palsson BØ. Thirteen years of building constraint-based in silico models of Escherichia coli. Journal of Bacteriology. 185: 2692-9. PMID 12700248 DOI: 10.1128/Jb.185.9.2692-2699.2003  1
2003 Price ND, Reed JL, Papin JA, Famili I, Palsson BO. Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices. Biophysical Journal. 84: 794-804. PMID 12547764 DOI: 10.1016/S0006-3495(03)74899-1  1
2002 Reed J, Foran J. Political Cultures of Opposition Exploring Idioms, Ideologies, and Revolutionary Agency in the Case of Nicaragua Critical Sociology. 28: 335-370. DOI: 10.1177/08969205020280030401  0.84
2001 Reed JP, Halliday WR. Establishment of Cry9C susceptibility baselines for European corn borer and southwestern corn borer (Lepidoptera: Crambidae). Journal of Economic Entomology. 94: 397-402. PMID 11332831  0.01
1994 Reed JP, Hendley ED. Blood cell changes in spontaneously hypertensive rats are not all associated with the hypertensive phenotype. Journal of Hypertension. 12: 391-9. PMID 8064163  1
1990 Reed JP, Hall FR, Krueger HR. Measurement of ATV applicator exposure to atrazine using an ELISA method. Bulletin of Environmental Contamination and Toxicology. 44: 8-12. PMID 2306541  0.01
1989 Reed JP, Keaster AJ, Kremer RJ, Kerr HD. Microbial degradation of some soil-applied insecticides, herbicides, and insecticide-herbicide combinations. Bulletin of Environmental Contamination and Toxicology. 42: 676-81. PMID 2742997 DOI: 10.1007/BF01700387  0.01
1989 Reed JP, Krueger HR, Hall FR. Fluorescein diacetate hydrolysis for determination of accelerated degradation of thiocarbamate herbicides. Bulletin of Environmental Contamination and Toxicology. 43: 929-34. PMID 2597800  0.01
1987 Reed JP, Kremer RJ, Keaster AJ. Characterization of microorganisms in soils exhibiting accelerated pesticide degradation. Bulletin of Environmental Contamination and Toxicology. 39: 776-82. PMID 3690003 DOI: 10.1007/BF01855854  0.01
1980 Reed JP, Fike DJ, Page SD, Sullivan AM, Breen ME. A model career ladder approach to medical technology education. The American Journal of Medical Technology. 46: 96-101. PMID 7355906  0.01
1979 Battreall CM, Friedrichs WE, Reed JP, Aron GM. Temperature-sensitive mutants of bacteriophage SH-133 specific for the hydrogen bacterium Pseudomonas facilis: isolation, complementation, and partial characterization. Canadian Journal of Microbiology. 25: 86-93. PMID 427659  0.01
1977 Reed JP. The pastoral care of victims of major disaster. Journal of Pastoral Care. 31: 97-108. PMID 10305556  0.01
1973 Stovin PG, Reed JP. Morphometric and histochemical investigation on human right atrial and mitral papillary muscle. Cardiovascular Research. 7: 39-46. PMID 4266601  0.01
1968 Winnett G, Reed JP. Aldrin, dieldrin, endrin, and chlordane persistence--a 3-year study. Pesticides Monitoring Journal. 2: 133-6. PMID 5729624  0.01
1966 Papacostas CA, Reed JP. Influence of beta receptor blockade on certain cardiovascular actions of nicotine. Archives Internationales De Pharmacodynamie Et De théRapie. 164: 167-72. PMID 5972310  0.01
1954 REED JP, KEMPH JP, HAMELBERG W, HITCHCOCK FA, JACOBY J. Studies with transtracheal artificial respiration. Anesthesiology. 15: 28-41. PMID 13124793  0.01
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