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Bart Barrell, Ph.D - Publications

Affiliations: 
1963-1993 MRC Laboratory of Molecular Biology, Cambridge, England, United Kingdom 
Area:
DNA sequencing
Website:
http://bartbarrell.com/curriculum-vitae.html
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58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Reid AJ, Blake DP, Ansari HR, Billington K, Browne HP, Bryant J, Dunn M, Hung SS, Kawahara F, Miranda-Saavedra D, Malas TB, Mourier T, Naghra H, Nair M, Otto TD, ... ... Barrell B, et al. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research. 24: 1676-85. PMID 25015382 DOI: 10.1101/Gr.168955.113  0.453
2014 Mavian C, López-Bueno A, Bryant NA, Seeger K, Quail MA, Harris D, Barrell B, Alcami A. The genome sequence of ectromelia virus Naval and Cornell isolates from outbreaks in North America. Virology. 462: 218-26. PMID 24999046 DOI: 10.1016/J.Virol.2014.06.010  0.536
2010 Pickard D, Toribio AL, Petty NK, van Tonder A, Yu L, Goulding D, Barrell B, Rance R, Harris D, Wetter M, Wain J, Choudhary J, Thomson N, Dougan G. A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar Typhi. Journal of Bacteriology. 192: 5746-54. PMID 20817773 DOI: 10.1128/Jb.00659-10  0.399
2010 Otto TD, Wilinski D, Assefa S, Keane TM, Sarry LR, Böhme U, Lemieux J, Barrell B, Pain A, Berriman M, Newbold C, Llinás M. New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq. Molecular Microbiology. 76: 12-24. PMID 20141604 DOI: 10.1111/J.1365-2958.2009.07026.X  0.446
2010 Hughes DJ, Kipar A, Milligan SG, Cunningham C, Sanders M, Quail MA, Rajandream MA, Efstathiou S, Bowden RJ, Chastel C, Bennett M, Sample JT, Barrell B, Davison AJ, Stewart JP. Characterization of a novel wood mouse virus related to murid herpesvirus 4. The Journal of General Virology. 91: 867-79. PMID 19940063 DOI: 10.1099/Vir.0.017327-0  0.523
2009 Ward PN, Holden MT, Leigh JA, Lennard N, Bignell A, Barron A, Clark L, Quail MA, Woodward J, Barrell BG, Egan SA, Field TR, Maskell D, Kehoe M, Dowson CG, et al. Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis. Bmc Genomics. 10: 54. PMID 19175920 DOI: 10.1186/1471-2164-10-54  0.379
2009 Holden MT, Seth-Smith HM, Crossman LC, Sebaihia M, Bentley SD, Cerdeño-Tárraga AM, Thomson NR, Bason N, Quail MA, Sharp S, Cherevach I, Churcher C, Goodhead I, Hauser H, Holroyd N, ... ... Barrell BG, et al. The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients. Journal of Bacteriology. 191: 261-77. PMID 18931103 DOI: 10.1128/JB.01230-08  0.3
2008 Mourier T, Carret C, Kyes S, Christodoulou Z, Gardner PP, Jeffares DC, Pinches R, Barrell B, Berriman M, Griffiths-Jones S, Ivens A, Newbold C, Pain A. Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum. Genome Research. 18: 281-92. PMID 18096748 DOI: 10.1101/Gr.6836108  0.438
2007 Bentley SD, Vernikos GS, Snyder LA, Churcher C, Arrowsmith C, Chillingworth T, Cronin A, Davis PH, Holroyd NE, Jagels K, Maddison M, Moule S, Rabbinowitsch E, Sharp S, Unwin L, ... ... Barrell B, et al. Meningococcal genetic variation mechanisms viewed through comparative analysis of serogroup C strain FAM18. Plos Genetics. 3: e23. PMID 17305430 DOI: 10.1371/Journal.Pgen.0030023  0.518
2006 Khan A, Böhme U, Kelly KA, Adlem E, Brooks K, Simmonds M, Mungall K, Quail MA, Arrowsmith C, Chillingworth T, Churcher C, Harris D, Collins M, Fosker N, Fraser A, ... ... Barrell B, et al. Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii. Genome Research. 16: 1119-25. PMID 16902086 DOI: 10.1101/Gr.5318106  0.442
2006 Sebaihia M, Wren BW, Mullany P, Fairweather NF, Minton N, Stabler R, Thomson NR, Roberts AP, Cerdeño-Tárraga AM, Wang H, Holden MT, Wright A, Churcher C, Quail MA, Baker S, ... ... Barrell B, et al. The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nature Genetics. 38: 779-86. PMID 16804543 DOI: 10.1038/Ng1830  0.492
2006 Bentley SD, Aanensen DM, Mavroidi A, Saunders D, Rabbinowitsch E, Collins M, Donohoe K, Harris D, Murphy L, Quail MA, Samuel G, Skovsted IC, Kaltoft MS, Barrell B, Reeves PR, et al. Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes. Plos Genetics. 2: e31. PMID 16532061 DOI: 10.1371/Journal.Pgen.0020031  0.425
2006 Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, ... ... Barrell B, et al. Erratum: Corrigendum: Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus Nature. 439: 502-502. DOI: 10.1038/Nature04572  0.527
2005 Nierman WC, Pain A, Anderson MJ, Wortman JR, Kim HS, Arroyo J, Berriman M, Abe K, Archer DB, Bermejo C, Bennett J, Bowyer P, Chen D, Collins M, Coulsen R, ... ... Barrell B, et al. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature. 438: 1151-6. PMID 16372009 DOI: 10.1038/Nature04332  0.528
2005 Wilson WH, Schroeder DC, Allen MJ, Holden MT, Parkhill J, Barrell BG, Churcher C, Hamlin N, Mungall K, Norbertczak H, Quail MA, Price C, Rabbinowitsch E, Walker D, Craigon M, et al. Complete genome sequence and lytic phase transcription profile of a Coccolithovirus. Science (New York, N.Y.). 309: 1090-2. PMID 16099989 DOI: 10.1126/science.1113109  0.411
2005 Ivens AC, Peacock CS, Worthey EA, Murphy L, Aggarwal G, Berriman M, Sisk E, Rajandream MA, Adlem E, Aert R, Anupama A, Apostolou Z, Attipoe P, Bason N, Bauser C, ... ... Barrell B, et al. The genome of the kinetoplastid parasite, Leishmania major. Science (New York, N.Y.). 309: 436-42. PMID 16020728 DOI: 10.1126/Science.1112680  0.513
2005 Pain A, Renauld H, Berriman M, Murphy L, Yeats CA, Weir W, Kerhornou A, Aslett M, Bishop R, Bouchier C, Cochet M, Coulson RM, Cronin A, de Villiers EP, Fraser A, ... ... Barrell B, et al. Genome of the host-cell transforming parasite Theileria annulata compared with T. parva. Science (New York, N.Y.). 309: 131-3. PMID 15994557 DOI: 10.1126/Science.1110418  0.461
2005 Eichinger L, Pachebat JA, Glöckner G, Rajandream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, ... ... Barrell B, et al. The genome of the social amoeba Dictyostelium discoideum. Nature. 435: 43-57. PMID 15875012 DOI: 10.1038/Nature03481  0.48
2005 Thomson NR, Yeats C, Bell K, Holden MT, Bentley SD, Livingstone M, Cerdeño-Tárraga AM, Harris B, Doggett J, Ormond D, Mungall K, Clarke K, Feltwell T, Hance Z, Sanders M, ... ... Barrell BG, et al. The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation. Genome Research. 15: 629-40. PMID 15837807 DOI: 10.1101/gr.3684805  0.516
2005 Aslett M, Mooney P, Adlem E, Berriman M, Berry A, Hertz-Fowler C, Ivens AC, Kerhornou A, Parkhill J, Peacock CS, Wood V, Rajandream MA, Barrell B, Tivey A. Integration of tools and resources for display and analysis of genomic data for protozoan parasites. International Journal For Parasitology. 35: 481-93. PMID 15826641 DOI: 10.1016/J.Ijpara.2005.01.011  0.358
2005 Cerdeño-Tárraga AM, Patrick S, Crossman LC, Blakely G, Abratt V, Lennard N, Poxton I, Duerden B, Harris B, Quail MA, Barron A, Clark L, Corton C, Doggett J, Holden MT, ... ... Barrell B, et al. Extensive DNA inversions in the B. fragilis genome control variable gene expression. Science (New York, N.Y.). 307: 1463-5. PMID 15746427 DOI: 10.1126/Science.1107008  0.452
2005 Loftus B, Anderson I, Davies R, Alsmark UC, Samuelson J, Amedeo P, Roncaglia P, Berriman M, Hirt RP, Mann BJ, Nozaki T, Suh B, Pop M, Duchene M, Ackers J, ... ... Barrell B, et al. The genome of the protist parasite Entamoeba histolytica. Nature. 433: 865-8. PMID 15729342 DOI: 10.1038/Nature03291  0.486
2005 Mourier T, Pain A, Barrell B, Griffiths-Jones S. A selenocysteine tRNA and SECIS element in Plasmodium falciparum. Rna (New York, N.Y.). 11: 119-22. PMID 15659354 DOI: 10.1261/Rna.7185605  0.435
2005 Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, ... ... Barrell B, et al. A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses. Science (New York, N.Y.). 307: 82-6. PMID 15637271 DOI: 10.1126/Science.1103717  0.461
2005 Bentley SD, Vernikos G, Snyder LAS, Churcher C, Arrowsmith C, Chillingworth T, Cronin A, Davis PH, Holroyd NE, Jagels K, Maddison M, Moule S, Rabbinowitsch E, Sharp S, Unwin L, ... ... Barrell B, et al. Comparative genomic view of mechanisms of variation in Neisseria meningitidis through sequencing and analysis of a third meningococcal genome from serogroup C strain FAM18 Plos Genetics. DOI: 10.1371/Journal.Pgen.0030023.Eor  0.494
2004 Parkinson J, Mitreva M, Whitton C, Thomson M, Daub J, Martin J, Schmid R, Hall N, Barrell B, Waterston RH, McCarter JP, Blaxter ML. A transcriptomic analysis of the phylum Nematoda. Nature Genetics. 36: 1259-67. PMID 15543149 DOI: 10.1038/Ng1472  0.489
2004 Whitton C, Daub J, Quail M, Hall N, Foster J, Ware J, Ganatra M, Slatko B, Barrell B, Blaxter M. A genome sequence survey of the filarial nematode Brugia malayi: repeats, gene discovery, and comparative genomics. Molecular and Biochemical Parasitology. 137: 215-27. PMID 15383292 DOI: 10.1016/J.Molbiopara.2004.05.013  0.598
2004 Holden MT, Titball RW, Peacock SJ, Cerdeño-Tárraga AM, Atkins T, Crossman LC, Pitt T, Churcher C, Mungall K, Bentley SD, Sebaihia M, Thomson NR, Bason N, Beacham IR, Brooks K, ... ... Barrell BG, et al. Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei. Proceedings of the National Academy of Sciences of the United States of America. 101: 14240-5. PMID 15377794 DOI: 10.1073/pnas.0403302101  0.418
2004 Holden MT, Feil EJ, Lindsay JA, Peacock SJ, Day NP, Enright MC, Foster TJ, Moore CE, Hurst L, Atkin R, Barron A, Bason N, Bentley SD, Chillingworth C, Chillingworth T, ... ... Barrell BG, et al. Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance. Proceedings of the National Academy of Sciences of the United States of America. 101: 9786-91. PMID 15213324 DOI: 10.1073/Pnas.0402521101  0.325
2004 Pain A, Woodward J, Quail MA, Anderson MJ, Clark R, Collins M, Fosker N, Fraser A, Harris D, Larke N, Murphy L, Humphray S, O'Neil S, Pertea M, Price C, ... ... Barrell B, et al. Insight into the genome of Aspergillus fumigatus: analysis of a 922 kb region encompassing the nitrate assimilation gene cluster. Fungal Genetics and Biology : Fg & B. 41: 443-53. PMID 14998527 DOI: 10.1016/J.Fgb.2003.12.003  0.551
2004 Hertz-Fowler C, Peacock CS, Wood V, Aslett M, Kerhornou A, Mooney P, Tivey A, Berriman M, Hall N, Rutherford K, Parkhill J, Ivens AC, Rajandream MA, Barrell B. GeneDB: a resource for prokaryotic and eukaryotic organisms. Nucleic Acids Research. 32: D339-43. PMID 14681429 DOI: 10.1093/Nar/Gkh007  0.467
2003 Parkhill J, Sebaihia M, Preston A, Murphy LD, Thomson N, Harris DE, Holden MT, Churcher CM, Bentley SD, Mungall KL, Cerdeño-Tárraga AM, Temple L, James K, Harris B, Quail MA, ... ... Barrell BG, et al. Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nature Genetics. 35: 32-40. PMID 12910271 DOI: 10.1038/Ng1227  0.326
2003 Hall N, Berriman M, Lennard NJ, Harris BR, Hertz-Fowler C, Bart-Delabesse EN, Gerrard CS, Atkin RJ, Barron AJ, Bowman S, Bray-Allen SP, Bringaud F, Clark LN, Corton CH, Cronin A, ... ... Barrell B, et al. The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism. Nucleic Acids Research. 31: 4864-73. PMID 12907729 DOI: 10.1093/Nar/Gkg674  0.45
2003 Garnier T, Eiglmeier K, Camus JC, Medina N, Mansoor H, Pryor M, Duthoy S, Grondin S, Lacroix C, Monsempe C, Simon S, Harris B, Atkin R, Doggett J, Mayes R, ... ... Barrell BG, et al. The complete genome sequence of Mycobacterium bovis. Proceedings of the National Academy of Sciences of the United States of America. 100: 7877-82. PMID 12788972 DOI: 10.1073/pnas.1130426100  0.388
2003 Bentley SD, Maiwald M, Murphy LD, Pallen MJ, Yeats CA, Dover LG, Norbertczak HT, Besra GS, Quail MA, Harris DE, von Herbay A, Goble A, Rutter S, Squares R, Squares S, ... Barrell BG, et al. Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Lancet (London, England). 361: 637-44. PMID 12606174 DOI: 10.1016/S0140-6736(03)12597-4  0.386
2003 Wood V, Gwilliam R, Rajandream M, Lyne M, Lyne R, Stewart A, Sgouros J, Peat N, Hayles J, Baker S, Basham D, Bowman S, Brooks K, Brown D, Brown S, ... ... Barrell BG, et al. Erratum: corrigendum: The genome sequence of Schizosaccharomyces pombe Nature. 421: 94-94. DOI: 10.1038/Nature01203  0.537
2002 Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, ... ... Barrell B, et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature. 419: 498-511. PMID 12368864 DOI: 10.1038/Nature01097  0.561
2002 Peter A, Schöttler P, Werner M, Beinert N, Dowe G, Burkert P, Mourkioti F, Dentzer L, He Y, Deak P, Benos PV, Gatt MK, Murphy L, Harris D, Barrell B, et al. Mapping and identification of essential gene functions on the X chromosome of Drosophila. Embo Reports. 3: 34-8. PMID 11751581 DOI: 10.1093/Embo-Reports/Kvf012  0.486
2001 Wood V, Rutherford KM, Ivens A, Rajandream MA, Barrell B. A re-annotation of the Saccharomyces cerevisiae genome. Comparative and Functional Genomics. 2: 143-154. PMID 18628908 DOI: 10.1002/Cfg.86  0.426
2001 Sánchez M, Revuelta JL, Rey Fd, Gwilliam R, Skelton J, Churcher C, Rajandream M, Wood V, Barrell B, Lyne R, Reinhardt R, Borzym K, Beck A, Moreno S, Domínguez A. Analysis of 41 kb of the DNA sequence from the right arm of chromosome II of Schizosaccharomyces pombe. Yeast. 18: 1111-1116. PMID 11536333 DOI: 10.1002/Yea.760  0.459
2001 Gordon SV, Eiglmeier K, Garnier T, Brosch R, Parkhill J, Barrell B, Cole ST, Hewinson RG. Genomics of Mycobacterium bovis. Tuberculosis. 81: 157-163. PMID 11463237 DOI: 10.1054/Tube.2000.0269  0.47
2001 Benos PV, Gatt MK, Murphy L, Harris D, Barrell B, Ferraz C, Vidal S, Brun C, Demaille J, Cadieu E, Dreano S, Gloux S, Lelaure V, Mottier S, Galibert F, et al. From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. Genome Research. 11: 710-30. PMID 11337470 DOI: 10.1101/Gr.173801  0.545
2001 del Portillo HA, Fernandez-Becerra C, Bowman S, Oliver K, Preuss M, Sanchez CP, Schneider NK, Villalobos JM, Rajandream MA, Harris D, Pereira da Silva LH, Barrell B, Lanzer M. A superfamily of variant genes encoded in the subtelomeric region of Plasmodium vivax. Nature. 410: 839-42. PMID 11298455 DOI: 10.1038/35071118  0.416
2000 Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream M, Barrell B. Artemis: sequence visualization and annotation. Bioinformatics. 16: 944-945. PMID 11120685 DOI: 10.1093/Bioinformatics/16.10.944  0.521
2000 Benos PV, Gatt MK, Ashburner M, Murphy L, Harris D, Barrell B, Ferraz C, Vidal S, Brun C, Demailles J, Cadieu E, Dreano S, Gloux S, Lelaure V, Mottier S, et al. From sequence to chromosome: the tip of the X chromosome of D. melanogaster. Science (New York, N.Y.). 287: 2220-2. PMID 10731137 DOI: 10.1126/Science.287.5461.2220  0.443
2000 Lawson D, Bowman S, Barrell B. Bioinformatics: Finding genes in Plasmodium falciparum Nature. 404: 34-35. DOI: 10.1038/35003646  0.34
1999 Preston A, Allen AG, Cadisch J, Thomas R, Stevens K, Churcher CM, Badcock KL, Parkhill J, Barrell B, Maskell DJ. Genetic basis for lipopolysaccharide O-antigen biosynthesis in bordetellae. Infection and Immunity. 67: 3763-7. PMID 10417135 DOI: 10.1128/Iai.67.8.3763-3767.1999  0.31
1999 Gordon SV, Heym B, Parkhill J, Barrell B, Cole ST. New insertion sequences and a novel repeated sequence in the genome of Mycobacterium tuberculosis H37Rv Microbiology. 145: 881-892. PMID 10220167 DOI: 10.1099/13500872-145-4-881  0.436
1996 Walsh S, Barrell B. The Saccharomyces cerevisiae genome on the world wide web Trends in Genetics. 12: 276-277. PMID 8763500 DOI: 10.1016/0168-9525(96)60029-8  0.451
1991 Beck S, Barrell B. An HCMV reading frame which has similarity with both the V and C regions of the TCR gamma chain. Dna Sequence. 2: 33-38. PMID 1666312 DOI: 10.3109/10425179109008436  0.355
1990 Chee M, Barrell B. Herpesviruses: a study of parts Trends in Genetics. 6: 86-91. PMID 2183417 DOI: 10.1016/0168-9525(90)90099-R  0.442
1990 Parker BD, Bankier A, Satchwell S, Barrell B, Farrell PJ. Sequence and transcription of Raji Epstein-Barr virus DNA spanning the B95-8 deletion region Virology. 179: 339-346. PMID 2171209 DOI: 10.1016/0042-6822(90)90302-8  0.47
1989 Chee M, Rudolph SA, Plachter B, Barrell B, Jahn G. Identification of the major capsid protein gene of human cytomegalovirus. Journal of Virology. 63: 1345-53. PMID 2536837 DOI: 10.1128/Jvi.63.3.1345-1353.1989  0.408
1987 Rüger B, Klages S, Walla B, Albrecht J, Fleckenstein B, Tomlinson P, Barrell B. Primary structure and transcription of the genes coding for the two virion phosphoproteins pp65 and pp71 of human cytomegalovirus. Journal of Virology. 61: 446-453. PMID 3027374 DOI: 10.1128/Jvi.61.2.446-453.1987  0.37
1986 Cranage M, Kouzarides T, Bankier A, Satchwell S, Weston K, Tomlinson P, Barrell B, Hart H, Bell S, Minson A. Identification of the human cytomegalovirus glycoprotein B gene and induction of neutralizing antibodies via its expression in recombinant vaccinia virus. The Embo Journal. 5: 3057-3063. DOI: 10.1002/J.1460-2075.1986.Tb04606.X  0.349
1984 Gibson T, Stockwell P, Ginsburg M, Barrell B. Homology between two EBV early genes and HSV ribonudeotide reductase and 38K genes Nucleic Acids Research. 12: 5087-5099. PMID 6330697 DOI: 10.1093/Nar/12.12.5087  0.451
1983 Farrell PJ, Deininger PL, Bankier A, Barrell B. Homologous upstream sequences near Epstein-Barr virus promoters Proceedings of the National Academy of Sciences of the United States of America. 80: 1565-1569. PMID 6300857 DOI: 10.1073/Pnas.80.6.1565  0.362
1982 Deininger PL, Bankier A, Farrell P, Baer R, Barrell B. Sequence analysis and in vitro transcription of portions of the Epstein-Barr virus genome Journal of Cellular Biochemistry. 19: 267-274. PMID 6296170 DOI: 10.1002/Jcb.240190308  0.503
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