Shujin Luo, Ph.D. - Publications

Affiliations: 
2006 University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Genetics, Forestry and Wildlife Agriculture, Zoology Biology, Ecology Biology

30/41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2025 Wu ZB, Sui ZY, Peng LH, Ghemrawi M, Duncan G, Jones H, O'Brien SJ, Luo SJ. Forensic Assessment of Kinship, Genomic Ancestry, and Natural History of an Iconic Tiger of Harlem-New York City. The Journal of Heredity. PMID 39868590 DOI: 10.1093/jhered/esaf003  0.413
2023 Heighton SP, Allio R, Murienne J, Salmona J, Meng H, Scornavacca C, Bastos ADS, Njiokou F, Pietersen DW, Tilak MK, Luo SJ, Delsuc F, Gaubert P. Pangolin Genomes Offer Key Insights and Resources for the World's Most Trafficked Wild Mammals. Molecular Biology and Evolution. 40. PMID 37794645 DOI: 10.1093/molbev/msad190  0.36
2023 Gu TT, Wu H, Yang F, Gaubert P, Heighton SP, Fu Y, Liu K, Luo SJ, Zhang HR, Hu JY, Yu L. Genomic analysis reveals a cryptic pangolin species. Proceedings of the National Academy of Sciences of the United States of America. 120: e2304096120. PMID 37748052 DOI: 10.1073/pnas.2304096120  0.381
2023 Sun X, Liu YC, Tiunov MP, Gimranov DO, Zhuang Y, Han Y, Driscoll CA, Pang Y, Li C, Pan Y, Velasco MS, Gopalakrishnan S, Yang RZ, Li BG, Jin K, ... ... Luo SJ, et al. Ancient DNA reveals genetic admixture in China during tiger evolution. Nature Ecology & Evolution. PMID 37652999 DOI: 10.1038/s41559-023-02185-8  0.456
2022 Lin L, Chen HQ, Gaillard D, Shi HT, Luo SJ. Phylogeography of the endangered "eyed" turtles (genus ) and the discovery of a lineage derived from natural interspecific hybridization. Ecology and Evolution. 12: e9545. PMID 36568866 DOI: 10.1002/ece3.9545  0.444
2021 Si S, Xu X, Zhuang Y, Gao X, Zhang H, Zou Z, Luo SJ. The genetics and evolution of eye color in domestic pigeons (Columba livia). Plos Genetics. 17: e1009770. PMID 34460822 DOI: 10.1371/journal.pgen.1009770  0.36
2021 Yu H, Xing YT, Meng H, He B, Li WJ, Qi XZ, Zhao JY, Zhuang Y, Xu X, Yamaguchi N, Driscoll CA, O'Brien SJ, Luo SJ. Genomic evidence for the Chinese mountain cat as a wildcat conspecific () and its introgression to domestic cats. Science Advances. 7. PMID 34162544 DOI: 10.1126/sciadv.abg0221  0.4
2019 Zhang W, Xu X, Yue B, Hou R, Xie J, Zou ZT, Han Y, Shen F, Zhang L, Xie Z, Yuan Y, Yin Y, Fu W, Chen D, Huang W, ... ... Luo SJ, et al. Sorting out the Genetic Background of the Last Surviving South China Tigers. The Journal of Heredity. PMID 31102441 DOI: 10.1093/Jhered/Esz034  0.532
2019 Luo SJ, Liu YC, Xu X. Tigers of the World: Genomics and Conservation. Annual Review of Animal Biosciences. 7: 521-548. PMID 30762441 DOI: 10.1146/Annurev-Animal-020518-115106  0.446
2018 Liu YC, Sun X, Driscoll C, Miquelle DG, Xu X, Martelli P, Uphyrkina O, Smith JLD, O'Brien SJ, Luo SJ. Genome-Wide Evolutionary Analysis of Natural History and Adaptation in the World's Tigers. Current Biology : Cb. PMID 30482605 DOI: 10.1016/J.Cub.2018.09.019  0.449
2017 Yu H, Song S, Liu J, Li S, Zhang L, Wang D, Luo SJ. Effects of the Qinghai-Tibet Railway on the Landscape Genetics of the Endangered Przewalski's Gazelle (Procapra przewalskii). Scientific Reports. 7: 17983. PMID 29269860 DOI: 10.1038/S41598-017-18163-7  0.518
2017 Gaubert P, Antunes A, Meng H, Miao L, Peigné S, Justy F, Njiokou F, Dufour S, Danquah E, Alahakoon J, Verheyen E, Stanley WT, O'Brien SJ, Johnson WE, Luo SJ. The complete phylogeny of pangolins: scaling up resources for the molecular tracing of the most trafficked mammals on Earth. The Journal of Heredity. PMID 29140441 DOI: 10.1093/Jhered/Esx097  0.456
2017 Xu X, Dong GX, Schmidt-Küntzel A, Zhang XL, Zhuang Y, Fang R, Sun X, Hu XS, Zhang TY, Yang HD, Zhang DL, Marker L, Jiang ZF, Li R, Luo SJ. The genetics of tiger pelage color variations. Cell Research. PMID 28281538 DOI: 10.1038/Cr.2017.32  0.425
2016 Gaubert P, Njiokou F, Ngua G, Afiademanyo K, Dufour S, Malekani J, Bi SG, Tougard C, Olayemi A, Danquah E, Djagoun CA, Kaleme P, Mololo CN, Stanley W, Luo SJ, et al. Phylogeography of the heavily poached African common pangolin (Pholidota, Manis tricuspis) reveals six cryptic lineages as traceable signatures of Pleistocene diversification. Molecular Ecology. PMID 27862533 DOI: 10.1111/Mec.13886  0.493
2016 Xu X, Sun X, Hu XS, Zhuang Y, Liu YC, Meng H, Miao L, Yu H, Luo SJ. Whole Genome Sequencing Identifies a Missense Mutation in HES7 Associated with Short Tails in Asian Domestic Cats. Scientific Reports. 6: 31583. PMID 27560986 DOI: 10.1038/Srep31583  0.458
2016 Ying LX, Zhang TT, Chiu CA, Chen TY, Luo SJ, Chen XY, Shen ZH. The phylogeography of Fagus hayatae (Fagaceae): genetic isolation among populations. Ecology and Evolution. PMID 27066254 DOI: 10.1002/Ece3.2042  0.523
2015 Zou ZT, Uphyrkina OV, Fomenko P, Luo SJ. The development and application of a multiplex short tandem repeat (STR) system for identifying subspecies, individuals and sex in tigers. Integrative Zoology. 10: 376-88. PMID 25950598 DOI: 10.1111/1749-4877.12136  0.455
2015 Xue HR, Yamaguchi N, Driscoll CA, Han Y, Bar-Gal GK, Zhuang Y, Mazak JH, Macdonald DW, O'Brien SJ, Luo SJ. Genetic ancestry of the extinct javan and bali tigers. The Journal of Heredity. 106: 247-57. PMID 25754539 DOI: 10.1093/Jhered/Esv002  0.605
2014 Luo SJ, Zhang Y, Johnson WE, Miao L, Martelli P, Antunes A, Smith JL, O'Brien SJ. Sympatric Asian felid phylogeography reveals a major Indochinese-Sundaic divergence. Molecular Ecology. 23: 2072-92. PMID 24629132 DOI: 10.1111/Mec.12716  0.384
2014 Malcolm KD, McShea WJ, Garshelis DL, Luo SJ, Van Deelen TR, Liu F, Li S, Miao L, Wang D, Brown JL. Increased stress in Asiatic black bears relates to food limitation, crop raiding, and foraging beyond nature reserve boundaries in China Global Ecology and Conservation. 2: 267-276. DOI: 10.1016/J.Gecco.2014.09.010  0.303
2013 Cho YS, Hu L, Hou H, Lee H, Xu J, Kwon S, Oh S, Kim HM, Jho S, Kim S, Shin YA, Kim BC, Kim H, Kim CU, Luo SJ, et al. The tiger genome and comparative analysis with lion and snow leopard genomes. Nature Communications. 4: 2433. PMID 24045858 DOI: 10.1038/Ncomms3433  0.445
2013 Xu X, Dong GX, Hu XS, Miao L, Zhang XL, Zhang DL, Yang HD, Zhang TY, Zou ZT, Zhang TT, Zhuang Y, Bhak J, Cho YS, Dai WT, Jiang TJ, ... ... Luo SJ, et al. The genetic basis of white tigers. Current Biology : Cb. 23: 1031-5. PMID 23707431 DOI: 10.1016/J.Cub.2013.04.054  0.454
2012 Lee M, Hyun J, Lee S, An J, Lee E, Min M, Kimura J, Kawada S, Kurihara N, Luo S, O'Brien SJ, Johnson WE, Lee H. Subspecific Status of the Korean Tiger Inferred by Ancient DNA Analysis Animal Systematics, Evolution and Diversity. 28: 48-53. DOI: 10.5635/Ased.2012.28.1.048  0.497
2010 Luo SJ, Johnson WE, O'Brien SJ. Applying molecular genetic tools to tiger conservation. Integrative Zoology. 5: 351-62. PMID 21392353 DOI: 10.1111/J.1749-4877.2010.00222.X  0.533
2009 Driscoll CA, Yamaguchi N, Bar-Gal GK, Roca AL, Luo S, Macdonald DW, O'Brien SJ. Mitochondrial phylogeography illuminates the origin of the extinct caspian tiger and its relationship to the amur tiger. Plos One. 4: e4125. PMID 19142238 DOI: 10.1371/Journal.Pone.0004125  0.533
2008 Luo SJ, Johnson WE, Martenson J, Antunes A, Martelli P, Uphyrkina O, Traylor-Holzer K, Smith JL, O'Brien SJ. Subspecies genetic assignments of worldwide captive tigers increase conservation value of captive populations. Current Biology : Cb. 18: 592-6. PMID 18424146 DOI: 10.1016/J.Cub.2008.03.053  0.458
2007 Luo SJ, Johnson WE, David VA, Menotti-Raymond M, Stanyon R, Cai QX, Beck T, Yuhki N, Pecon-Slattery J, Smith JL, O'Brien SJ. Development of Y chromosome intraspecific polymorphic markers in the Felidae. The Journal of Heredity. 98: 400-13. PMID 17646273 DOI: 10.1093/Jhered/Esm063  0.433
2007 Luo SJ, Cai QX, David VA, Zhang L, Martelli P, Lim NTL, Ferrand N, Chin SC, Gaubert P, Ramos MJ, O'Brien SJ, Antunes A, Johnson WE. Isolation and characterization of microsatellite markers in pangolins (Mammalia, Pholidota, Manis spp.): Primer note Molecular Ecology Notes. 7: 269-272. DOI: 10.1111/J.1471-8286.2006.01577.X  0.465
2006 Kim JH, Antunes A, Luo SJ, Menninger J, Nash WG, O'Brien SJ, Johnson WE. Evolutionary analysis of a large mtDNA translocation (numt) into the nuclear genome of the Panthera genus species. Gene. 366: 292-302. PMID 16380222 DOI: 10.1016/J.Gene.2005.08.023  0.443
2004 Luo SJ, Kim JH, Johnson WE, van der Walt J, Martenson J, Yuhki N, Miquelle DG, Uphyrkina O, Goodrich JM, Quigley HB, Tilson R, Brady G, Martelli P, Subramaniam V, McDougal C, et al. Phylogeography and genetic ancestry of tigers (Panthera tigris). Plos Biology. 2: e442. PMID 15583716 DOI: 10.1371/Journal.Pbio.0020442  0.504
Low-probability matches (unlikely to be authored by this person)
2023 Houck ML, Koepfli KP, Hains T, Khan R, Charter SJ, Fronczek JA, Misuraca AC, Kliver S, Perelman PL, Beklemisheva V, Graphodatsky A, Luo SJ, O'Brien SJ, Lim NT, Chin JSC, et al. Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 31: 13. PMID 37043058 DOI: 10.1007/s10577-023-09722-y  0.267
2017 Guan Z, Cai T, Liu Z, Dou Y, Hu X, Zhang P, Sun X, Li H, Kuang Y, Zhai Q, Ruan H, Li X, Li Z, Zhu Q, Mai J, ... ... Luo SJ, et al. Origin of the Reflectin Gene and Hierarchical Assembly of Its Protein. Current Biology : Cb. PMID 28889973 DOI: 10.1016/J.Cub.2017.07.061  0.255
2011 Driscoll CA, Luo S, MacDonald D, Dinerstein E, Chestin I, Pereladova O, O'Brien SJ. Restoring tigers to the Caspian region. Science (New York, N.Y.). 333: 822-3. PMID 21835996 DOI: 10.1126/Science.333.6044.822-B  0.247
2023 Fu Y, Zhuang Y, Luo SJ, Xu X. An Enhanced Method for the Use of Reptile Skin Sheds as a High-Quality DNA Source for Genome Sequencing. Genes. 14. PMID 37761818 DOI: 10.3390/genes14091678  0.245
2015 Qin S, Yin H, Yang C, Dou Y, Liu Z, Zhang P, Yu H, Huang Y, Feng J, Hao J, Hao J, Deng L, Yan X, Dong X, Zhao Z, ... ... Luo SJ, et al. A magnetic protein biocompass. Nature Materials. PMID 26569474 DOI: 10.1038/Nmat4484  0.236
2023 Tang CY, Zhang X, Xu X, Sun S, Peng C, Song MH, Yan C, Sun H, Liu M, Xie L, Luo SJ, Li JT. Genetic mapping and molecular mechanism behind color variation in the Asian vine snake. Genome Biology. 24: 46. PMID 36895044 DOI: 10.1186/s13059-023-02887-z  0.235
2014 Xu X, Luo SJ. How the white tiger lost its color, but kept its stripes. Science China. Life Sciences. 57: 1041-3. PMID 25323677 DOI: 10.1007/S11427-014-4697-Z  0.212
2023 O'Brien SJ, Luo SJ. Taxonomic species recognition should be consistent. National Science Review. 9: nwad022. PMID 36788967 DOI: 10.1093/nsr/nwad022  0.204
2016 Choo SW, Rayko M, Tan TK, Hari R, Komissarov A, Wee WY, Yurchenko A, Kliver S, Tamazian G, Antunes A, Wilson RK, Warren WC, Koepfli KP, Minx P, Krasheninnikova K, ... ... Luo SJ, et al. Pangolin genomes and the evolution of mammalian scales and immunity. Genome Research. PMID 27510566 DOI: 10.1101/Gr.203521.115  0.173
2022 Cao Y, Chen L, Chen H, Cun Y, Dai X, Du H, Gao F, Guo F, Guo Y, Hao P, He S, He S, He X, Hu Z, Hoh BP, ... ... Luo S, et al. Was Wuhan the early epicenter of the COVID-19 pandemic?-A critique. National Science Review. 10: nwac287. PMID 37089192 DOI: 10.1093/nsr/nwac287  0.051
2021 Luo SJ. The hidden Olympic spectator. Science (New York, N.Y.). 373: 404. PMID 34437113 DOI: 10.1126/science.abl3669  0.044
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