Jonathan Runstadler - Publications

Affiliations: 
University of Alaska Fairbanks, Fairbanks, AK, United States 
Area:
Genetics, Molecular Biology, Systematic Biology

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Gass JD, Hill NJ, Damodaran L, Naumova EN, Nutter FB, Runstadler JA. Ecogeographic Drivers of the Spatial Spread of Highly Pathogenic Avian Influenza Outbreaks in Europe and the United States, 2016-Early 2022. International Journal of Environmental Research and Public Health. 20. PMID 37297634 DOI: 10.3390/ijerph20116030  0.305
2018 Cammen KM, Schultz TF, Don Bowen W, Hammill MO, Puryear WB, Runstadler J, Wenzel FW, Wood SA, Kinnison M. Genomic signatures of population bottleneck and recovery in Northwest Atlantic pinnipeds. Ecology and Evolution. 8: 6599-6614. PMID 30038760 DOI: 10.1002/Ece3.4143  0.363
2018 Estrin MA, Hussein ITM, Puryear WB, Kuan AC, Artim SC, Runstadler JA. Host-directed combinatorial RNAi improves inhibition of diverse strains of influenza A virus in human respiratory epithelial cells. Plos One. 13: e0197246. PMID 29775471 DOI: 10.1371/journal.pone.0197246  0.304
2017 Ramey AM, Hill NJ, Cline T, Plancarte M, De La Cruz S, Casazza ML, Ackerman JT, Fleskes JP, Vickers TW, Reeves AB, Gulland F, Fontaine C, Prosser DJ, Runstadler JA, Boyce WM. Surveillance for highly pathogenic influenza A viruses in California during 2014-2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway. Emerging Microbes & Infections. 6: e80. PMID 28874792 DOI: 10.1038/Emi.2017.66  0.317
2017 Bui VN, Trinh DQ, Abao LNB, Ozeki Y, Runstadler J, Nakamura K, Ogawa H, Imai K. Evaluation of the replication and pathogenicity of a variant avian paramyxovirus serotype 6 in mice. Archives of Virology. PMID 28685285 DOI: 10.1007/S00705-017-3459-1  0.349
2017 Hill NJ, Hussein IT, Davis KR, Ma EJ, Spivey TJ, Ramey AM, Puryear WB, Das SR, Halpin RA, Lin X, Fedorova NB, Suarez DL, Boyce WM, Runstadler JA. Reassortment of Influenza A Viruses in Wild Birds in Alaska before H5 Clade 2.3.4.4 Outbreaks. Emerging Infectious Diseases. 23: 654-657. PMID 28322698 DOI: 10.3201/eid2304.161668  0.309
2017 Cammen KM, Vincze S, Heller AS, McLeod BA, Wood SA, Bowen WD, Hammill MO, Puryear WB, Runstadler J, Wenzel FW, Kinnison M, Frasier TR. Genetic diversity from pre-bottleneck to recovery in two sympatric pinniped species in the Northwest Atlantic Conservation Genetics. 19: 555-569. DOI: 10.1007/S10592-017-1032-9  0.357
2016 Sultan S, Bui VN, Hill NJ, Hussein IT, Trinh DQ, Inage K, Hashizume T, Runstadler JA, Ogawa H, Imai K. Genetic characterization of H5N2 influenza viruses isolated from wild birds in Japan suggests multiple reassortment. Archives of Virology. PMID 27573808 DOI: 10.1007/s00705-016-3023-4  0.361
2016 Puryear WB, Keogh M, Hill N, Moxley J, Josephson E, Davis KR, Bandoro C, Lidgard D, Bogomolni A, Levin M, Lang S, Hammill M, Bowen D, Johnston DW, Romano T, ... ... Runstadler J, et al. Prevalence of influenza A virus in live-captured North Atlantic gray seals: a possible wild reservoir. Emerging Microbes & Infections. 5: e81. PMID 27485496 DOI: 10.1038/Emi.2016.77  0.392
2016 Ma EJ, Hill NJ, Zabilansky J, Yuan K, Runstadler JA. Reticulate evolution is favored in influenza niche switching. Proceedings of the National Academy of Sciences of the United States of America. PMID 27114508 DOI: 10.1073/Pnas.1522921113  0.371
2016 Hussein IT, Ma EJ, Hill NJ, Meixell BW, Lindberg M, Albrecht RA, Bahl J, Runstadler JA. A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 27101787 DOI: 10.1016/j.meegid.2016.04.011  0.357
2016 Hussein IT, Krammer F, Ma E, Estrin M, Viswanathan K, Stebbins NW, Quinlan DS, Sasisekharan R, Runstadler J. New England harbor seal H3N8 influenza virus retains avian-like receptor specificity. Scientific Reports. 6: 21428. PMID 26888262 DOI: 10.1038/Srep21428  0.373
2016 Ma EJ, Runstadler J. A real-time surveillance dashboard for monitoring viral phenotype from sequence International Journal of Infectious Diseases. 53: 117. DOI: 10.1016/J.Ijid.2016.11.292  0.3
2015 Bui VN, Ogawa H, Hussein IT, Hill NJ, Trinh DQ, AboElkhair M, Sultan S, Ma E, Saito K, Watanabe Y, Runstadler JA, Imai K. Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan. Virus Genes. 50: 316-20. PMID 25557930 DOI: 10.1007/s11262-014-1162-9  0.348
2014 Bui VN, Mizutani T, Nguyen TH, Trinh DQ, Awad SS, Minoungou GL, Yamamoto Y, Nakamura K, Saito K, Watanabe Y, Runstadler J, Huettmann F, Ogawa H, Imai K. Characterization of a genetic and antigenic variant of avian paramyxovirus 6 isolated from a migratory wild bird, the red-necked stint (Calidris ruficollis). Archives of Virology. 159: 3101-5. PMID 25000900 DOI: 10.1007/S00705-014-2162-8  0.368
2014 Bui VN, Ogawa H, Trinh DQ, Nguyen TH, Pham NT, Truong DA, Bui AN, Runstadler J, Imai K, Nguyen KV. Genetic characterization of an H5N1 avian influenza virus from a vaccinated duck flock in Vietnam. Virus Genes. 49: 278-85. PMID 24880916 DOI: 10.1007/S11262-014-1089-1  0.42
2014 Krammer F, Albrecht RA, Tan GS, Margine I, Hai R, Schmolke M, Runstadler J, Andrews SF, Wilson PC, Cox RJ, Treanor JJ, García-Sastre A, Palese P. Divergent H7 immunogens offer protection from H7N9 virus challenge. Journal of Virology. 88: 3976-85. PMID 24453375 DOI: 10.1128/Jvi.03095-13  0.351
2014 Bui VN, Dao TD, Nguyen TT, Nguyen LT, Bui AN, Trinh DQ, Pham NT, Inui K, Runstadler J, Ogawa H, Nguyen KV, Imai K. Pathogenicity of an H5N1 avian influenza virus isolated in Vietnam in 2012 and reliability of conjunctival samples for diagnosis of infection. Virus Research. 179: 125-32. PMID 24211664 DOI: 10.1016/J.Virusres.2013.10.023  0.423
2013 Arai Y, Bui VN, Takeda Y, Trinh DQ, Nibuno S, Runstadler J, Ogawa H, Imai K. Lung cytokine gene expression is correlated with increased severity of disease in a novel H4N8 influenza virus isolated from shorebirds. The Journal of Veterinary Medical Science / the Japanese Society of Veterinary Science. 75: 1341-7. PMID 23759687 DOI: 10.1292/Jvms.13-0201  0.406
2013 Runstadler J, Hill N, Hussein IT, Puryear W, Keogh M. Connecting the study of wild influenza with the potential for pandemic disease. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 17: 162-87. PMID 23541413 DOI: 10.1016/J.Meegid.2013.02.020  0.416
2013 Vernau KM, Runstadler JA, Brown EA, Cameron JM, Huson HJ, Higgins RJ, Ackerley C, Sturges BK, Dickinson PJ, Puschner B, Giulivi C, Shelton GD, Robinson BH, DiMauro S, Bollen AW, et al. Genome-wide association analysis identifies a mutation in the thiamine transporter 2 (SLC19A3) gene associated with Alaskan Husky encephalopathy. Plos One. 8: e57195. PMID 23469184 DOI: 10.1371/Journal.Pone.0057195  0.61
2013 Abao LN, Jamsransuren D, Bui VN, Ngo LH, Trinh DQ, Yamaguchi E, Vijaykrishna D, Runstadler J, Ogawa H, Imai K. Surveillance and characterization of avian influenza viruses from migratory water birds in eastern Hokkaido, the northern part of Japan, 2009-2010. Virus Genes. 46: 323-9. PMID 23264106 DOI: 10.1007/S11262-012-0868-9  0.418
2013 Bui VN, Ogawa H, Ngo LH, Baatartsogt T, Abao LN, Tamaki S, Saito K, Watanabe Y, Runstadler J, Imai K. H5N1 highly pathogenic avian influenza virus isolated from conjunctiva of a whooper swan with neurological signs. Archives of Virology. 158: 451-5. PMID 23053526 DOI: 10.1007/S00705-012-1502-9  0.415
2012 Sivay MV, Sayfutdinova SG, Sharshov KA, Alekseev AY, Yurlov AK, Runstadler J, Shestopalov AM. Surveillance of influenza A virus in wild birds in the Asian portion of Russia in 2008. Avian Diseases. 56: 456-63. PMID 23050460 DOI: 10.1637/9868-080111-Reg.1  0.416
2012 Hill NJ, Takekawa JY, Ackerman JT, Hobson KA, Herring G, Cardona CJ, Runstadler JA, Boyce WM. Migration strategy affects avian influenza dynamics in mallards (Anas platyrhynchos). Molecular Ecology. 21: 5986-99. PMID 22971007 DOI: 10.1111/J.1365-294X.2012.05735.X  0.331
2012 Girard YA, Runstadler JA, Aldehoff F, Boyce W. Genetic structure of Pacific Flyway avian influenza viruses is shaped by geographic location, host species, and sampling period. Virus Genes. 44: 415-28. PMID 22222690 DOI: 10.1007/s11262-011-0706-5  0.324
2012 Bui VN, Ogawa H, Xininigen, Karibe K, Matsuo K, Awad SS, Minoungou GL, Yoden S, Haneda H, Ngo LH, Tamaki S, Yamamoto Y, Nakamura K, Saito K, Watanabe Y, ... Runstadler J, et al. H4N8 subtype avian influenza virus isolated from shorebirds contains a unique PB1 gene and causes severe respiratory disease in mice. Virology. 423: 77-88. PMID 22192630 DOI: 10.1016/J.Virol.2011.11.019  0.416
2012 Huson HJ, vonHoldt BM, Rimbault M, Byers AM, Runstadler JA, Parker HG, Ostrander EA. Breed-specific ancestry studies and genome-wide association analysis highlight an association between the MYH9 gene and heat tolerance in Alaskan sprint racing sled dogs. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 178-94. PMID 22105876 DOI: 10.1007/S00335-011-9374-Y  0.629
2012 Bui VN, Ogawa H, Xininigen [V, Karibe K, Matsuo K, Awad SSA, Minoungou GL, Yoden S, Haneda H, Ngo LH, Tamaki S, Yamamoto Y, Nakamura K, Saito K, Watanabe Y, ... Runstadler J, et al. Erratum to “H4N8 subtype avian influenza virus isolated from shorebirds contains a unique PB1 gene and causes severe respiratory disease in mice” [Virology 423 (2012) 77–88] Virology. 426: 83-85. DOI: 10.1016/J.Virol.2012.01.010  0.411
2011 Reeves AB, Pearce JM, Ramey AM, Meixell BW, Runstadler JA. Interspecies transmission and limited persistence of low pathogenic avian influenza genomes among Alaska dabbling ducks. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 11: 2004-10. PMID 21964597 DOI: 10.1016/j.meegid.2011.09.011  0.338
2011 Huson HJ, Byers AM, Runstadler J, Ostrander EA. An SNP within the angiotensin-converting enzyme distinguishes between sprint and distance performing Alaskan sled dogs in a candidate gene analysis. The Journal of Heredity. 102: S19-27. PMID 21846742 DOI: 10.1093/Jhered/Esr022  0.648
2011 Wille M, Robertson GJ, Whitney H, Bishop MA, Runstadler JA, Lang AS. Extensive geographic mosaicism in avian influenza viruses from gulls in the northern hemisphere. Plos One. 6: e20664. PMID 21697989 DOI: 10.1371/journal.pone.0020664  0.332
2011 Pearce JM, Reeves AB, Ramey AM, Hupp JW, Ip HS, Bertram M, Petrula MJ, Scotton BD, Trust KA, Meixell BW, Runstadler JA. Interspecific exchange of avian influenza virus genes in Alaska: the influence of trans-hemispheric migratory tendency and breeding ground sympatry. Molecular Ecology. 20: 1015-25. PMID 21073586 DOI: 10.1111/j.1365-294X.2010.04908.x  0.35
2011 Bui VN, Ogawa H, Karibe K, Matsuo K, Nguyen TH, Awad SS, Minoungou GL, Xininigen, Saito K, Watanabe Y, Runstadler JA, Happ GM, Imai K. Surveillance of avian influenza virus in migratory water birds in eastern Hokkaido, Japan. The Journal of Veterinary Medical Science / the Japanese Society of Veterinary Science. 73: 209-15. PMID 20948168 DOI: JST.JSTAGE/jvms/10-0356  0.311
2010 Huson HJ, Parker HG, Runstadler J, Ostrander EA. A genetic dissection of breed composition and performance enhancement in the Alaskan sled dog. Bmc Genetics. 11: 71. PMID 20649949 DOI: 10.1186/1471-2156-11-71  0.634
2010 Dillon D, Runstadler J. Mx gene diversity and influenza association among five wild dabbling duck species (Anas spp.) in Alaska. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 10: 1085-93. PMID 20621205 DOI: 10.1016/J.Meegid.2010.07.004  0.465
2010 Sayfutdinova S, Runstadler J, Kulak M, Sivay M. Monitoring for avian influenza in wild birds on the Far East in 2008 International Journal of Infectious Diseases. 14. DOI: 10.1016/J.Ijid.2010.02.2205  0.366
2008 Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK. The evolutionary genetics and emergence of avian influenza viruses in wild birds. Plos Pathogens. 4: e1000076. PMID 18516303 DOI: 10.1371/Journal.Ppat.1000076  0.38
2008 Wang R, Soll L, Dugan V, Runstadler J, Happ G, Slemons RD, Taubenberger JK. Examining the hemagglutinin subtype diversity among wild duck-origin influenza A viruses using ethanol-fixed cloacal swabs and a novel RT-PCR method. Virology. 375: 182-9. PMID 18308356 DOI: 10.1016/J.Virol.2008.01.041  0.405
2008 Lang AS, Kelly A, Runstadler JA. Prevalence and diversity of avian influenza viruses in environmental reservoirs. The Journal of General Virology. 89: 509-19. PMID 18198382 DOI: 10.1099/Vir.0.83369-0  0.319
2007 Runstadler JA, Happ GM, Slemons RD, Sheng ZM, Gundlach N, Petrula M, Senne D, Nolting J, Evers DL, Modrell A, Huson H, Hills S, Rothe T, Marr T, Taubenberger JK. Using RRT-PCR analysis and virus isolation to determine the prevalence of avian influenza virus infections in ducks at Minto Flats State Game Refuge, Alaska, during August 2005 Archives of Virology. 152: 1901-1910. PMID 17541700 DOI: 10.1007/S00705-007-0994-1  0.624
2006 Runstadler JA, Angles JM, Pedersen NC. Dog leucocyte antigen class II diversity and relationships among indigenous dogs of the island nations of Indonesia (Bali), Australia and New Guinea. Tissue Antigens. 68: 418-26. PMID 17092255 DOI: 10.1111/J.1399-0039.2006.00696.X  0.313
2005 Runstadler JA, Säilä H, Savolainen A, Leirisalo-Repo M, Aho K, Tuomilehto-Wolf E, Tuomilehto J, Seldin MF. Association of SLC11A1 (NRAMP1) with persistent oligoarticular and polyarticular rheumatoid factor-negative juvenile idiopathic arthritis in Finnish patients: haplotype analysis in Finnish families. Arthritis and Rheumatism. 52: 247-56. PMID 15641099 DOI: 10.1002/Art.20772  0.495
2003 Runstadler JA, Säilä H, Savolainen A, Leirisalo-Repo M, Aho K, Tuomilehto-Wolf E, Tuomilehto J, Seldin MF. Analysis of MHC region genetics in Finnish patients with juvenile idiopathic arthritis: evidence for different locus-specific effects in polyarticular vs pauciarticular subsets and a shared DRB1 epitope. Genes and Immunity. 4: 326-35. PMID 12847547 DOI: 10.1038/Sj.Gene.6364002  0.51
1991 Runstadler JA, Kocher TD. A new antennapedia-class gene from the zebrafish. Nucleic Acids Research. 19: 5434. PMID 1681510 DOI: 10.1093/Nar/19.19.5434  0.374
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