| Year |
Citation |
Score |
| 2023 |
Li Y, Guan H, Li J, Zhang J, Wang Y, Li J, Tan H. An intricate regulation of WblA controlling production of silent tylosin analogues and abolishment of expressible nikkomycin. Science China. Life Sciences. PMID 36607495 DOI: 10.1007/s11427-022-2199-1 |
0.381 |
|
| 2021 |
Li Y, Yu H, Guan H, Li J, Zhang J, Xiang H, Li J, Tan H. Activation of Cryptic Antibiotic Biosynthetic Gene Clusters Guided by RNA-seq Data from Both and ΔwblA. Antibiotics (Basel, Switzerland). 10. PMID 34572679 DOI: 10.3390/antibiotics10091097 |
0.334 |
|
| 2019 |
Mudge JM, Jungreis I, Hunt T, Gonzalez JM, Wright JC, Kay M, Davidson C, Fitzgerald S, Seal R, Tweedie S, He L, Waterhouse RM, Li Y, Bruford E, Choudhary JS, et al. Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci. Genome Research. PMID 31537640 DOI: 10.1101/Gr.246462.118 |
0.33 |
|
| 2018 |
Wang Y, Li Y, Yue M, Wang J, Kumar S, Wechsler-Reya RJ, Zhang Z, Ogawa Y, Kellis M, Duester G, Zhao JC. Publisher Correction: N-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications. Nature Neuroscience. PMID 29880878 DOI: 10.1038/S41593-018-0169-2 |
0.528 |
|
| 2018 |
Wang Y, Li Y, Yue M, Wang J, Kumar S, Wechsler-Reya RJ, Zhang Z, Ogawa Y, Kellis M, Duester G, Zhao JC. N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications. Nature Neuroscience. PMID 29335608 DOI: 10.1038/S41593-017-0057-1 |
0.571 |
|
| 2017 |
Kreimer A, Zeng H, Edwards MD, Guo Y, Tian K, Shin S, Welch R, Wainberg M, Mohan R, Sinnott-Armstrong NA, Li Y, Eraslan G, Amin TB, Goke J, Mueller NS, et al. Predicting gene expression in massively parallel reporter assays: a comparative study. Human Mutation. PMID 28220625 DOI: 10.1002/Humu.23197 |
0.315 |
|
| 2016 |
Olsen JB, Wong L, Deimling S, Miles A, Guo H, Li Y, Zhang Z, Greenblatt JF, Emili A, Tropepe V. G9a and ZNF644 Physically Associate to Suppress Progenitor Gene Expression during Neurogenesis. Stem Cell Reports. PMID 27546533 DOI: 10.1016/J.Stemcr.2016.06.012 |
0.567 |
|
| 2016 |
Paul JM, Toosi B, Vizeacoumar FS, Bhanumathy KK, Li Y, Gerger C, El Zawily A, Freywald T, Anderson DH, Mousseau D, Kanthan R, Zhang Z, Vizeacoumar FJ, Freywald A. Targeting synthetic lethality between the SRC kinase and the EPHB6 receptor may benefit cancer treatment. Oncotarget. PMID 27418135 DOI: 10.18632/Oncotarget.10569 |
0.542 |
|
| 2016 |
Liang C, Li Y, Luo J. A Novel Method to Detect Functional microRNA Regulatory Modules by Bicliques Merging. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 13: 549-556. PMID 27295638 DOI: 10.1109/Tcbb.2015.2462370 |
0.349 |
|
| 2016 |
Wong KC, Li Y, Peng C, Wong HS. A Comparison Study for DNA Motif Modeling on Protein Binding Microarray. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 13: 261-271. PMID 27045826 DOI: 10.1109/Tcbb.2015.2443782 |
0.517 |
|
| 2016 |
Wong KC, Peng C, Li Y. Evolving Transcription Factor Binding Site Models From Protein Binding Microarray Data. Ieee Transactions On Cybernetics. PMID 26887021 DOI: 10.1109/Tcyb.2016.2519380 |
0.516 |
|
| 2016 |
Li Y, Li J, Tian Z, Xu Y, Zhang J, Liu W, Tan H. Coordinative Modulation of Chlorothricin Biosynthesis by Binding of the Glycosylated Intermediates and End Product to A Responsive Regulator ChlF1. The Journal of Biological Chemistry. PMID 26750095 DOI: 10.1074/Jbc.M115.695874 |
0.363 |
|
| 2015 |
Wong KC, Peng C, Li Y. Probabilistic Inference on Multiple Normalized Signal Profiles from Next Generation Sequencing: Transcription Factor Binding Sites. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 1416-28. PMID 26671811 DOI: 10.1109/Tcbb.2015.2424421 |
0.56 |
|
| 2015 |
Wong KC, Li Y, Peng C, Moses AM, Zhang Z. Computational learning on specificity-determining residue-nucleotide interactions. Nucleic Acids Research. PMID 26527718 DOI: 10.1093/Nar/Gkv1134 |
0.625 |
|
| 2015 |
Wong KC, Li Y, Peng C. Identification of Coupling DNA Motif Pairs on Long-Range Chromatin Interactions in Human K562 Cells. Bioinformatics (Oxford, England). PMID 26411866 DOI: 10.1093/Bioinformatics/Btv555 |
0.51 |
|
| 2015 |
Li Y, Wang Y, Zhang Z, Zamudio AV, Zhao JC. Genome-wide detection of high abundance N6-methyladenosine sites by microarray. Rna (New York, N.Y.). 21: 1511-8. PMID 26092943 DOI: 10.1261/Rna.051474.115 |
0.555 |
|
| 2015 |
Li Y, Zhang Z. Computational Biology in microRNA. Wiley Interdisciplinary Reviews. Rna. 6: 435-52. PMID 25914300 DOI: 10.1002/Wrna.1286 |
0.62 |
|
| 2015 |
Liang C, Li Y, Luo J, Zhang Z. A novel motif-discovery algorithm to identify co-regulatory motifs in large transcription factor and microRNA co-regulatory networks in human. Bioinformatics (Oxford, England). 31: 2348-55. PMID 25788622 DOI: 10.1093/Bioinformatics/Btv159 |
0.611 |
|
| 2015 |
Wong KC, Li Y, Peng C, Zhang Z. SignalSpider: probabilistic pattern discovery on multiple normalized ChIP-Seq signal profiles. Bioinformatics (Oxford, England). 31: 17-24. PMID 25192742 DOI: 10.1093/Bioinformatics/Btu604 |
0.661 |
|
| 2014 |
Li Y, Zhang Z. Potential microRNA-mediated oncogenic intercellular communication revealed by pan-cancer analysis. Scientific Reports. 4: 7097. PMID 25403569 DOI: 10.1038/Srep07097 |
0.608 |
|
| 2014 |
Li Y, Liang M, Zhang Z. Regression analysis of combined gene expression regulation in acute myeloid leukemia. Plos Computational Biology. 10: e1003908. PMID 25340776 DOI: 10.1371/Journal.Pcbi.1003908 |
0.662 |
|
| 2014 |
Li Y, Liang C, Easterbrook S, Luo J, Zhang Z. Investigating the functional implications of reinforcing feedback loops in transcriptional regulatory networks. Molecular Biosystems. 10: 3238-48. PMID 25286350 DOI: 10.1039/C4Mb00526K |
0.642 |
|
| 2014 |
Li Y, Liang C, Wong KC, Luo J, Zhang Z. Mirsynergy: detecting synergistic miRNA regulatory modules by overlapping neighbourhood expansion. Bioinformatics (Oxford, England). 30: 2627-35. PMID 24894504 DOI: 10.1093/Bioinformatics/Btu373 |
0.661 |
|
| 2014 |
Li Y, Liang C, Wong KC, Jin K, Zhang Z. Inferring probabilistic miRNA-mRNA interaction signatures in cancers: a role-switch approach. Nucleic Acids Research. 42: e76. PMID 24609385 DOI: 10.1093/Nar/Gku182 |
0.664 |
|
| 2014 |
Wang Y, Li Y, Toth JI, Petroski MD, Zhang Z, Zhao JC. N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells. Nature Cell Biology. 16: 191-8. PMID 24394384 DOI: 10.1038/Ncb2902 |
0.562 |
|
| 2014 |
Li Y, Goldenberg A, Wong KC, Zhang Z. A probabilistic approach to explore human miRNA targetome by integrating miRNA-overexpression data and sequence information. Bioinformatics (Oxford, England). 30: 621-8. PMID 24135265 DOI: 10.1093/Bioinformatics/Btt599 |
0.651 |
|
| 2014 |
Wong K, Peng C, Li Y, Chan T. Herd Clustering: A synergistic data clustering approach using collective intelligence Applied Soft Computing. 23: 61-75. DOI: 10.1016/J.Asoc.2014.05.034 |
0.421 |
|
| 2013 |
Wong KC, Chan TM, Peng C, Li Y, Zhang Z. DNA motif elucidation using belief propagation. Nucleic Acids Research. 41: e153. PMID 23814189 DOI: 10.1093/Nar/Gkt574 |
0.625 |
|
| 2013 |
Li Y, Zhao DY, Greenblatt JF, Zhang Z. RIPSeeker: a statistical package for identifying protein-associated transcripts from RIP-seq experiments. Nucleic Acids Research. 41: e94. PMID 23455476 DOI: 10.1093/Nar/Gkt142 |
0.587 |
|
| 2011 |
Chang R, Tan J, Xu F, Han H, Geng Y, Li Y, Qiao W. Lysine acetylation sites in bovine foamy virus transactivator BTas are important for its DNA binding activity. Virology. 418: 21-6. PMID 21813148 DOI: 10.1016/J.Virol.2011.07.003 |
0.313 |
|
| 2008 |
Tan J, Qiao W, Wang J, Xu F, Li Y, Zhou J, Chen Q, Geng Y. IFP35 is involved in the antiviral function of interferon by association with the viral tas transactivator of bovine foamy virus. Journal of Virology. 82: 4275-83. PMID 18305040 DOI: 10.1128/Jvi.02249-07 |
0.307 |
|
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