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Yoosik Kim - Publications

Affiliations: 
Korea Advanced Institute of Science and Technology, Daejeon, South Korea 
 2011 Chemical and Biological Engineering Princeton University, Princeton, NJ 
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24/49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Aldonza MBD, Cha J, Yong I, Ku J, Sinitcyn P, Lee D, Cho RE, Delos Reyes RD, Kim D, Kim S, Kang M, Ku Y, Park G, Sung HJ, Ryu HS, ... ... Kim Y, et al. Multi-targeted therapy resistance via drug-induced secretome fucosylation. Elife. 12. PMID 36961502 DOI: 10.7554/eLife.75191  0.744
2021 Shin SB, Kim DH, Kim DE, Aldonza MBD, Kim Y, Yim H. Dual Targeting of EGFR with PLK1 Exerts Therapeutic Synergism in Taxane-Resistant Lung Adenocarcinoma by Suppressing ABC Transporters. Cancers. 13. PMID 34503223 DOI: 10.3390/cancers13174413  0.743
2021 Aldonza MBD, Reyes RDD, Kim YS, Ku J, Barsallo AM, Hong JY, Lee SK, Ryu HS, Park Y, Cho JY, Kim Y. Chemotherapy confers a conserved secondary tolerance to EGFR inhibition via AXL-mediated signaling bypass. Scientific Reports. 11: 8016. PMID 33850249 DOI: 10.1038/s41598-021-87599-9  0.737
2020 Aldonza MBD, Ku J, Hong JY, Kim D, Yu SJ, Lee MS, Prayogo MC, Tan S, Kim D, Han J, Lee SK, Im SG, Ryu HS, Kim Y. Prior acquired resistance to paclitaxel relays diverse EGFR-targeted therapy persistence mechanisms. Science Advances. 6: eaav7416. PMID 32083171 DOI: 10.1126/Sciadv.Aav7416  0.745
2018 Kim Y, Park J, Kim S, Kim M, Kang MG, Kwak C, Kang M, Kim B, Rhee HW, Kim VN. PKR Senses Nuclear and Mitochondrial Signals by Interacting with Endogenous Double-Stranded RNAs. Molecular Cell. PMID 30174290 DOI: 10.1016/J.Molcel.2018.07.029  0.319
2017 Jang Y, Kim MA, Kim Y. Two faces of competition: target-mediated reverse signalling in microRNA and mitogen-activated protein kinase regulatory networks. Iet Systems Biology. 11: 105-113. PMID 28721939 DOI: 10.1049/Iet-Syb.2016.0042  0.331
2016 Park JE, Yi H, Kim Y, Chang H, Kim VN. Regulation of Poly(A) Tail and Translation during the Somatic Cell Cycle. Molecular Cell. 62: 462-471. PMID 27153541 DOI: 10.1016/J.Molcel.2016.04.007  0.32
2014 Kim Y, Lee JH, Park JE, Cho J, Yi H, Kim VN. PKR is activated by cellular dsRNAs during mitosis and acts as a mitotic regulator. Genes & Development. 28: 1310-22. PMID 24939934 DOI: 10.1101/Gad.242644.114  0.403
2013 Kim Y, Iagovitina A, Ishihara K, Fitzgerald KM, Deplancke B, Papatsenko D, Shvartsman SY. Context-dependent transcriptional interpretation of mitogen activated protein kinase signaling in the Drosophila embryo. Chaos (Woodbury, N.Y.). 23: 025105. PMID 23822503 DOI: 10.1063/1.4808157  0.673
2012 Cho J, Chang H, Kwon SC, Kim B, Kim Y, Choe J, Ha M, Kim YK, Kim VN. LIN28A is a suppressor of ER-associated translation in embryonic stem cells. Cell. 151: 765-77. PMID 23102813 DOI: 10.1016/J.Cell.2012.10.019  0.311
2012 Grimm O, Sanchez Zini V, Kim Y, Casanova J, Shvartsman SY, Wieschaus E. Torso RTK controls Capicua degradation by changing its subcellular localization. Development (Cambridge, England). 139: 3962-8. PMID 23048183 DOI: 10.1242/dev.084327  0.618
2012 Helman A, Lim B, Andreu MJ, Kim Y, Shestkin T, Lu H, Jiménez G, Shvartsman SY, Paroush Z. RTK signaling modulates the Dorsal gradient. Development (Cambridge, England). 139: 3032-9. PMID 22791891 DOI: 10.1242/Dev.075812  0.773
2012 Kanodia JS, Liang HL, Kim Y, Lim B, Zhan M, Lu H, Rushlow CA, Shvartsman SY. Pattern formation by graded and uniform signals in the early Drosophila embryo. Biophysical Journal. 102: 427-33. PMID 22325264 DOI: 10.1016/J.Bpj.2011.12.042  0.754
2011 Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY. A computational statistics approach for estimating the spatial range of morphogen gradients. Development (Cambridge, England). 138: 4867-74. PMID 22007136 DOI: 10.1242/Dev.071571  0.764
2011 Kim Y, Andreu MJ, Lim B, Chung K, Terayama M, Jiménez G, Berg CA, Lu H, Shvartsman SY. Gene regulation by MAPK substrate competition. Developmental Cell. 20: 880-7. PMID 21664584 DOI: 10.1016/J.Devcel.2011.05.009  0.773
2011 Kim Y, Paroush Z, Nairz K, Hafen E, Jiménez G, Shvartsman SY. Substrate-dependent control of MAPK phosphorylation in vivo. Molecular Systems Biology. 7: 467. PMID 21283143 DOI: 10.1038/Msb.2010.121  0.589
2011 Chung K, Kim Y, Kanodia JS, Gong E, Shvartsman SY, Lu H. A microfluidic array for large-scale ordering and orientation of embryos. Nature Methods. 8: 171-6. PMID 21186361 DOI: 10.1038/Nmeth.1548  0.755
2010 Tipping M, Kim Y, Kyriakakis P, Tong M, Shvartsman SY, Veraksa A. β-arrestin Kurtz inhibits MAPK and Toll signalling in Drosophila development. The Embo Journal. 29: 3222-35. PMID 20802461 DOI: 10.1038/Emboj.2010.202  0.626
2010 Kavousanakis ME, Kanodia JS, Kim Y, Kevrekidis IG, Shvartsman SY. A compartmental model for the bicoid gradient. Developmental Biology. 345: 12-7. PMID 20580703 DOI: 10.1016/J.Ydbio.2010.05.491  0.764
2010 Kim Y, Coppey M, Grossman R, Ajuria L, Jiménez G, Paroush Z, Shvartsman SY. MAPK substrate competition integrates patterning signals in the Drosophila embryo. Current Biology : Cb. 20: 446-51. PMID 20171100 DOI: 10.1016/J.Cub.2010.01.019  0.748
2010 Hirashima T, Kim Y, Shvartsman SY. The signaling properties in MAPK cycle are modulated by its downstream substrates Developmental Biology. 344: 430-431. DOI: 10.1016/J.Ydbio.2010.05.086  0.55
2009 Kanodia JS, Rikhy R, Kim Y, Lund VK, DeLotto R, Lippincott-Schwartz J, Shvartsman SY. Dynamics of the Dorsal morphogen gradient. Proceedings of the National Academy of Sciences of the United States of America. 106: 21707-12. PMID 19996178 DOI: 10.1073/Pnas.0912395106  0.772
2008 Coppey M, Berezhkovskii AM, Kim Y, Boettiger AN, Shvartsman SY. Corrigendum to "Modeling the bicoid gradient: Diffusion and reversible nuclear trapping of a stable protein" [Dev. Biol. 312 (2007) 623-630] (DOI:10.1016/j.ydbio.2007.09.058) Developmental Biology. 316: 548. DOI: 10.1016/J.Ydbio.2008.02.002  0.687
2007 Coppey M, Berezhkovskii AM, Kim Y, Boettiger AN, Shvartsman SY. Modeling the bicoid gradient: diffusion and reversible nuclear trapping of a stable protein. Developmental Biology. 312: 623-30. PMID 18001703 DOI: 10.1016/J.Ydbio.2007.09.058  0.721
Low-probability matches (unlikely to be authored by this person)
2019 Kunkeaw N, Lee YS, Im WR, Jang JJ, Song MJ, Yang B, Park JL, Kim SY, Ku Y, Kim Y, Kang S, Jo HR, Jeong JH, Lee HS, Lee JS, et al. Mechanism mediated by a noncoding RNA, nc886, in the cytotoxicity of a DNA-reactive compound. Proceedings of the National Academy of Sciences of the United States of America. PMID 30948645 DOI: 10.1073/Pnas.1814510116  0.297
2019 Kim S, Kang M, Kim Y. Studying RNA Interactors of Protein Kinase RNA-Activated during the Mammalian Cell Cycle. Journal of Visualized Experiments : Jove. PMID 30907880 DOI: 10.3791/59215  0.278
2014 Kim Y, Yeo J, Lee JH, Cho J, Seo D, Kim JS, Kim VN. Deletion of human tarbp2 reveals cellular microRNA targets and cell-cycle function of TRBP. Cell Reports. 9: 1061-74. PMID 25437560 DOI: 10.1016/J.Celrep.2014.09.039  0.268
2024 Ku J, Lee K, Ku D, Kim S, Lee J, Bang H, Kim N, Do H, Lee H, Lim C, Han J, Lee YS, Kim Y. Alternative polyadenylation determines the functional landscape of inverted Alu repeats. Molecular Cell. PMID 38309276 DOI: 10.1016/j.molcel.2024.01.008  0.257
2019 Kim S, Ku Y, Ku J, Kim Y. Evidence of Aberrant Immune Response by Endogenous Double-Stranded RNAs: Attack from Within. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1900023. PMID 31099409 DOI: 10.1002/Bies.201900023  0.25
2012 Kim Y, Kim VN. MicroRNA factory: RISC assembly from precursor microRNAs. Molecular Cell. 46: 384-6. PMID 22633486 DOI: 10.1016/J.Molcel.2012.05.012  0.243
2020 Ku J, Kim S, Park J, Kim TS, Kharbash R, Shin EC, Char K, Kim Y, Li S. Reactive Polymer Targeting dsRNA as Universal Virus Detection Platform with Enhanced Sensitivity. Biomacromolecules. PMID 32233463 DOI: 10.1021/Acs.Biomac.0C00379  0.238
2018 Son H, Ku J, Kim Y, Li S, Char K. Amine-Reactive Poly(Pentafluorophenyl Acrylate) Brush Platforms for Cleaner Protein Purification. Biomacromolecules. PMID 29406744 DOI: 10.1021/Acs.Biomac.7B01736  0.234
2020 Ali AA, Kharbash R, Kim Y. Chemo- and biosensing applications of spiropyran and its derivatives - A review. Analytica Chimica Acta. 1110: 199-223. PMID 32278396 DOI: 10.1016/J.Aca.2020.01.057  0.226
2022 Kang M, Kharbash R, Byun JM, Jeon J, Ali AA, Ku D, Yoon J, Ku Y, Sohn J, Lee SV, Shin DY, Koh Y, Yoon SS, Hong J, Kim Y. Double-stranded RNA induction asa potential dynamic biomarkerfor DNA-demethylating agents. Molecular Therapy. Nucleic Acids. 29: 370-383. PMID 36035755 DOI: 10.1016/j.omtn.2022.07.014  0.217
2020 Ku J, Kim R, Kim D, Kim D, Song S, Lee K, Lee N, Kim M, Yoon SS, Kwon NH, Kim S, Kim Y, Koh Y. Single-cell analysis of AIMP2 splice variants informs on drug sensitivity and prognosis in hematologic cancer. Communications Biology. 3: 630. PMID 33128014 DOI: 10.1038/s42003-020-01353-x  0.184
2022 Yoon J, Lee M, Ali AA, Oh YR, Choi YS, Kim S, Lee N, Jang SG, Park S, Chung JH, Kwok SK, Hyon JY, Cha S, Lee YJ, Im SG, ... Kim Y, et al. Mitochondrial double-stranded RNAs as a pivotal mediator in the pathogenesis of Sjӧgren's syndrome. Molecular Therapy. Nucleic Acids. 30: 257-269. PMID 36284513 DOI: 10.1016/j.omtn.2022.09.020  0.172
2021 Ku Y, Park JH, Cho R, Lee Y, Park HM, Kim M, Hur K, Byun SY, Liu J, Lee YS, Shum D, Shin DY, Koh Y, Cho JY, Yoon SS, ... ... Kim Y, et al. Noncanonical immune response to the inhibition of DNA methylation by Staufen1 via stabilization of endogenous retrovirus RNAs. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33762305 DOI: 10.1073/pnas.2016289118  0.167
2022 Jee H, Park E, Hur K, Kang M, Kim Y. High-Intensity Aerobic Exercise Suppresses Cancer Growth by Regulating Skeletal Muscle-Derived Oncogenes and Tumor Suppressors. Frontiers in Molecular Biosciences. 9: 818470. PMID 35801156 DOI: 10.3389/fmolb.2022.818470  0.144
2023 Yoon J, Ku D, Lee M, Lee N, Im SG, Kim Y. Resveratrol Attenuates the Mitochondrial RNA-Mediated Cellular Response to Immunogenic Stress. International Journal of Molecular Sciences. 24. PMID 37108567 DOI: 10.3390/ijms24087403  0.132
2022 Kim S, Lee K, Choi YS, Ku J, Kim H, Kharbash R, Yoon J, Lee YS, Kim JH, Lee YJ, Kim Y. Mitochondrial double-stranded RNAs govern the stress response in chondrocytes to promote osteoarthritis development. Cell Reports. 40: 111178. PMID 35947956 DOI: 10.1016/j.celrep.2022.111178  0.132
2023 Kim S, Yoon J, Lee K, Kim Y. Analysis of mitochondrial double-stranded RNAs in human cells. Star Protocols. 4: 102007. PMID 36853732 DOI: 10.1016/j.xpro.2022.102007  0.124
2021 Song J, Kim S, Kim HY, Hur KH, Kim Y, Park HG. A novel method to detect mutation in DNA by utilizing exponential amplification reaction triggered by the CRISPR-Cas9 system. Nanoscale. PMID 33720266 DOI: 10.1039/d1nr00438g  0.12
2023 Yoon J, Kim S, Lee M, Kim Y. Mitochondrial nucleic acids in innate immunity and beyond. Experimental & Molecular Medicine. PMID 38036728 DOI: 10.1038/s12276-023-01121-x  0.116
2022 Park S, Ku J, Lee SM, Hwang H, Lee N, Kim H, Yoon KJ, Kim Y, Choi SQ. Potential toxicity of inorganic ions in particulate matter: Ion permeation in lung and disruption of cell metabolism. The Science of the Total Environment. 153818. PMID 35157864 DOI: 10.1016/j.scitotenv.2022.153818  0.112
2019 Ali AA, Kang M, Kharbash R, Kim Y. Spiropyran as a potential molecular diagnostic tool for double-stranded RNA detection. Bmc Biomedical Engineering. 1: 6. PMID 32903305 DOI: 10.1186/s42490-019-0008-x  0.102
2021 Ryu DH, Ryu D, Baek YS, Cho H, Kim G, Kim YS, Lee Y, Kim Y, Ye JC, Min HS, Park YK. DeepRegularizer: Rapid Resolution Enhancement of Tomographic Imaging using Deep Learning. Ieee Transactions On Medical Imaging. PMID 33566760 DOI: 10.1109/TMI.2021.3058373  0.091
2024 Ku J, Lee K, Kim Y. Meet the authors: Jayoung Ku, Keonyong Lee, and Yoosik Kim. Molecular Cell. 84: 991-994. PMID 38518748 DOI: 10.1016/j.molcel.2024.02.022  0.046
2021 Thatayatikom A, Jun I, Bhattacharyya I, Berg K, Lee YJ, Kim Y, Adewumi A, Zhang W, Thatayatikom S, Shah A, Beal C, Modica R, Elder ME, Cha S. The Diagnostic Performance of Early Sjögren's Syndrome Autoantibodies in Juvenile Sjögren's Syndrome: The University of Florida Pediatric Cohort Study. Frontiers in Immunology. 12: 704193. PMID 34249010 DOI: 10.3389/fimmu.2021.704193  0.031
2019 Kim Y, Lee J, Sanda F. Detecting non-displaceable toric fibers on compact toric manifolds via tropicalizations International Journal of Mathematics. 30: 1950003. DOI: 10.1142/S0129167X19500034  0.028
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