Thomas M. Shinnick - Publications

Affiliations: 
Emory University, Atlanta, GA 
Area:
Molecular Biology, Microbiology Biology

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lewinsohn DM, Leonard MK, LoBue PA, Cohn DL, Daley CL, Desmond E, Keane J, Lewinsohn DA, Loeffler AM, Mazurek GH, O'Brien RJ, Pai M, Richeldi L, Salfinger M, Shinnick TM, et al. Official American Thoracic Society/Infectious Diseases Society of America/Centers for Disease Control and Prevention Clinical Practice Guidelines: Diagnosis of Tuberculosis in Adults and Children. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 27932390 DOI: 10.1093/Cid/Ciw694  0.369
2015 Denkinger CM, Kik SV, Cirillo DM, Casenghi M, Shinnick T, Weyer K, Gilpin C, Boehme CC, Schito M, Kimerling M, Pai M. Defining the needs for next generation assays for tuberculosis. The Journal of Infectious Diseases. 211: S29-38. PMID 25765104 DOI: 10.1093/Infdis/Jiu821  0.402
2015 Baldwin PR, Reeves AZ, Powell KR, Napier RJ, Swimm AI, Sun A, Giesler K, Bommarius B, Shinnick TM, Snyder JP, Liotta DC, Kalman D. Monocarbonyl analogs of curcumin inhibit growth of antibiotic sensitive and resistant strains of Mycobacterium tuberculosis. European Journal of Medicinal Chemistry. 92: 693-9. PMID 25618016 DOI: 10.1016/J.Ejmech.2015.01.020  0.794
2015 Shinnick TM, Starks AM, Alexander HL, Castro KG. Evaluation of the Cepheid Xpert MTB/RIF assay. Expert Review of Molecular Diagnostics. 15: 9-22. PMID 25373876 DOI: 10.1586/14737159.2015.976556  0.509
2013 Reeves AZ, Campbell PJ, Sultana R, Malik S, Murray M, Plikaytis BB, Shinnick TM, Posey JE. Aminoglycoside cross-resistance in Mycobacterium tuberculosis due to mutations in the 5' untranslated region of whiB7. Antimicrobial Agents and Chemotherapy. 57: 1857-65. PMID 23380727 DOI: 10.1128/Aac.02191-12  0.628
2012 Datema TA, Oskam L, Engelberts MF, van Beers SM, Shinnick TM, Baker M, Ridderhof JC, Scholten J, van Deun A, Gilpin C, Klatser PR. Global laboratory initiative tool for a stepwise process towards tuberculosis laboratory accreditation. The International Journal of Tuberculosis and Lung Disease : the Official Journal of the International Union Against Tuberculosis and Lung Disease. 16: 704-5. PMID 22507938 DOI: 10.5588/Ijtld.11.0701  0.4
2012 Napier RJ, Shinnick TM, Kalman D. Back to the future: host-targeted chemotherapeutics for drug-resistant TB. Future Microbiology. 7: 431-5. PMID 22439718 DOI: 10.2217/Fmb.12.19  0.791
2012 Shinnick TM, Gilpin C. A Risk Assessment-based Approach to Defining Minimum Biosafety Precautions for Tuberculosis Laboratories in Resource-limited Settings Applied Biosafety. 17: 6-10. DOI: 10.1177/153567601201700102  0.388
2011 Napier RJ, Rafi W, Cheruvu M, Powell KR, Zaunbrecher MA, Bornmann W, Salgame P, Shinnick TM, Kalman D. Imatinib-sensitive tyrosine kinases regulate mycobacterial pathogenesis and represent therapeutic targets against tuberculosis. Cell Host & Microbe. 10: 475-85. PMID 22100163 DOI: 10.1016/J.Chom.2011.09.010  0.691
2011 Sable SB, Cheruvu M, Nandakumar S, Sharma S, Bandyopadhyay K, Kellar KL, Posey JE, Plikaytis BB, Amara RR, Shinnick TM. Cellular immune responses to nine Mycobacterium tuberculosis vaccine candidates following intranasal vaccination. Plos One. 6: e22718. PMID 21799939 DOI: 10.1371/Journal.Pone.0022718  0.312
2011 Sow FB, Nandakumar S, Velu V, Kellar KL, Schlesinger LS, Amara RR, Lafuse WP, Shinnick TM, Sable SB. Mycobacterium tuberculosis components stimulate production of the antimicrobial peptide hepcidin. Tuberculosis (Edinburgh, Scotland). 91: 314-21. PMID 21482189 DOI: 10.1016/J.Tube.2011.03.003  0.416
2010 Shinnick TM. Building tuberculosis laboratory capacity: Needs and strategies. Revista Portuguesa De Pneumologia. 16: S57-65. PMID 25965932 DOI: 10.1016/S0873-2159(15)30094-5  0.305
2009 Zaunbrecher MA, Sikes RD, Metchock B, Shinnick TM, Posey JE. Overexpression of the chromosomally encoded aminoglycoside acetyltransferase eis confers kanamycin resistance in Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America. 106: 20004-9. PMID 19906990 DOI: 10.1073/pnas.0907925106  0.751
2009 Starks AM, Gumusboga A, Plikaytis BB, Shinnick TM, Posey JE. Mutations at embB codon 306 are an important molecular indicator of ethambutol resistance in Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. 53: 1061-6. PMID 19104018 DOI: 10.1128/Aac.01357-08  0.48
2008 Sow FB, Sable SB, Plikaytis BB, Lafuse WP, Shinnick TM. Role of Hepcidin in the Innate Immune Response to Mycobacterium tuberculosis The Faseb Journal. 22: 556-556. DOI: 10.1096/Fasebj.22.2_Supplement.556  0.367
2007 Fu LM, Shinnick TM. Genome-wide analysis of intergenic regions of Mycobacterium tuberculosis H37Rv using Affymetrix GeneChips. Eurasip Journal On Bioinformatics & Systems Biology. 23054. PMID 18253472 DOI: 10.1155/2007/23054  0.33
2007 Lipin MY, Stepanshina VN, Shemyakin IG, Shinnick TM. Association of specific mutations in katG, rpoB, rps L and rrs genes with spoligotypes of multidrug-resistant Mycobacterium tuberculosis isolates in Russia Clinical Microbiology and Infection. 13: 620-626. PMID 17403134 DOI: 10.1111/j.1469-0691.2007.01711.x  0.384
2007 Sable SB, Plikaytis BB, Shinnick TM. Tuberculosis subunit vaccine development: impact of physicochemical properties of mycobacterial test antigens. Vaccine. 25: 1553-66. PMID 17166640 DOI: 10.1016/J.Vaccine.2006.11.014  0.301
2007 Cheruvu M, Plikaytis BB, Shinnick TM. The acid-induced operon Rv3083-Rv3089 is required for growth of Mycobacterium tuberculosis in macrophages. Tuberculosis (Edinburgh, Scotland). 87: 12-20. PMID 16893682 DOI: 10.1016/J.Tube.2006.01.021  0.372
2007 Fu LM, Shinnick TM. Understanding the action of INH on a highly INH-resistant Mycobacterium tuberculosis strain using Genechips. Tuberculosis (Edinburgh, Scotland). 87: 63-70. PMID 16890025 DOI: 10.1016/J.Tube.2006.04.001  0.553
2007 Fu LM, Shinnick TM. Genome-wide exploration of the drug action of capreomycin on Mycobacterium tuberculosis using Affymetrix oligonucleotide GeneChips. The Journal of Infection. 54: 277-84. PMID 16822547 DOI: 10.1016/J.Jinf.2006.05.012  0.568
2006 Caoili JC, Mayorova A, Sikes D, Hickman L, Plikaytis BB, Shinnick TM. Evaluation of the TB-Biochip oligonucleotide microarray system for rapid detection of rifampin resistance in Mycobacterium tuberculosis. Journal of Clinical Microbiology. 44: 2378-81. PMID 16825352 DOI: 10.1128/Jcm.00439-06  0.589
2006 Fallows D, Murray RA, Kaplan G, Shinnick T. Tuberculosis: integrating host and pathogen biology. A summary of the 2005 Keystone Symposia. Tuberculosis (Edinburgh, Scotland). 86: 144-8. PMID 16557661 DOI: 10.1016/J.Tube.2005.07.003  0.397
2006 Gessler D, Dye C, Farmer P, Murray M, Navin T, Reves R, Shinnick T, Small PM, Yates T, Simpson G. Public health. A National Tuberculosis Archive. Science (New York, N.Y.). 311: 1245-6. PMID 16513968 DOI: 10.1126/Science.1125762  0.352
2006 Posey JE, Shinnick TM, Quinn FD. Characterization of the twin-arginine translocase secretion system of Mycobacterium smegmatis. Journal of Bacteriology. 188: 1332-40. PMID 16452415 DOI: 10.1128/Jb.188.4.1332-1340.2006  0.371
2005 Maus CE, Plikaytis BB, Shinnick TM. Molecular analysis of cross-resistance to capreomycin, kanamycin, amikacin, and viomycin in Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. 49: 3192-7. PMID 16048924 DOI: 10.1128/Aac.49.8.3192-3197.2005  0.799
2005 Maus CE, Plikaytis BB, Shinnick TM. Mutation of tlyA confers capreomycin resistance in Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. 49: 571-7. PMID 15673735 DOI: 10.1128/Aac.49.2.571-577.2005  0.797
2005 Gencer B, Shinnick TM. Molecular Genotyping of Mycobacterium tuberculosis Isolates from Turkey American Journal of Infectious Diseases. 1: 5-11. DOI: 10.3844/ajidsp.2005.5.11  0.338
2005 Fisher MA, Plikaytis BB, Shinnick TM. Evaluation of Transcript Labeling Techniques and Development of a Membrane-based Parallel Gene Expression Assay American Journal of Biochemistry and Biotechnology. 1: 5-12. DOI: 10.3844/Ajbbsp.2005.5.12  0.308
2004 Shemyakin IG, Stepanshina VN, Ivanov IY, Lipin MY, Anisimova VA, Onasenko AG, Korobova OV, Shinnick TM. Characterization of drug-resistant isolates of Mycobacterium tuberculosis derived from Russian inmates International Journal of Tuberculosis and Lung Disease. 8: 1194-1203. PMID 15527151  0.452
2003 Zhu W, Plikaytis BB, Shinnick TM. Resuscitation factors from mycobacteria: homologs of Micrococcus luteus proteins. Tuberculosis (Edinburgh, Scotland). 83: 261-9. PMID 12906837 DOI: 10.1016/S1472-9792(03)00052-0  0.38
2003 Dotson EM, Plikaytis B, Shinnick TM, Durvasula RV, Beard CB. Transformation of Rhodococcus rhodnii, a symbiont of the Chagas disease vector Rhodnius prolixus, with integrative elements of the L1 mycobacteriophage. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 3: 103-9. PMID 12809804 DOI: 10.1016/S1567-1348(03)00002-9  0.3
2002 Jasmer RM, Roemer M, Hamilton J, Bunter J, Braden CR, Shinnick TM, Desmond EP. A prospective, multicenter study of laboratory cross-contamination of Mycobacterium tuberculosis cultures. Emerging Infectious Diseases. 8: 1260-3. PMID 12453353 DOI: 10.3201/Eid0811.020298  0.349
2002 Fisher MA, Plikaytis BB, Shinnick TM. Microarray analysis of the Mycobacterium tuberculosis transcriptional response to the acidic conditions found in phagosomes. Journal of Bacteriology. 184: 4025-32. PMID 12081975 DOI: 10.1128/Jb.184.14.4025-4032.2002  0.368
2002 Lawn SD, Butera ST, Shinnick TM. Tuberculosis unleashed: the impact of human immunodeficiency virus infection on the host granulomatous response to Mycobacterium tuberculosis. Microbes and Infection / Institut Pasteur. 4: 635-46. PMID 12048033 DOI: 10.1016/S1286-4579(02)01582-4  0.395
2001 Miller BH, Shinnick TM. Identification of two Mycobacterium tuberculosis H37Rv ORFs involved in resistance to killing by human macrophages. Bmc Microbiology. 1: 26. PMID 11716786 DOI: 10.1186/1471-2180-1-26  0.499
2000 Miller BH, Shinnick TM. Evaluation of Mycobacterium tuberculosis genes involved in resistance to killing by human macrophages. Infection and Immunity. 68: 387-90. PMID 10603413 DOI: 10.1128/Iai.68.1.387-390.2000  0.462
1999 Plikaytis BB, Kurepina N, Woodley CL, Fleischmann R, Kreiswirth B, Shinnick TM. Multiplex PCR assay to aid in the identification of the highly transmissible Mycobacterium tuberculosis strain CDC1551. Tubercle and Lung Disease : the Official Journal of the International Union Against Tuberculosis and Lung Disease. 79: 273-8. PMID 10707255 DOI: 10.1054/Tuld.1999.0197  0.447
1999 Mustafa AS, Lundin KEA, Meloen RH, Shinnick TM, Oftung F. Identification of promiscuous epitopes from the mycobacterial 65- kilodalton heat shock protein recognized by human CD4+ T cells of the Mycobacterium leprae memory repertoire Infection and Immunity. 67: 5683-5689. PMID 10531216 DOI: 10.1128/Iai.67.11.5683-5689.1999  0.315
1998 Plikaytis BB, Crawford JT, Shinnick TM. IS1549 from Mycobacterium smegmatis forms long direct repeats upon insertion Journal of Bacteriology. 180: 1037-1043. PMID 9495740 DOI: 10.1128/Jb.180.5.1037-1043.1998  0.36
1996 Marston BJ, Shinnick TM. Differentially expressed genes of Mycobacterium tuberculosis Annals of the New York Academy of Sciences. 797: 32-41. PMID 8993349 DOI: 10.1111/J.1749-6632.1996.Tb52947.X  0.416
1996 Weil A, Plikaytis BB, Butler WR, Woodley CL, Shinnick TM. The mtp40 gene is not present in all strains of Mycobacterium tuberculosis. Journal of Clinical Microbiology. 34: 2309-11. PMID 8862608 DOI: 10.1128/Jcm.34.9.2309-2311.1996  0.459
1996 Weil AC, Plikaytis BB, Woodley CL, Butler WR, Crawford JT, Shinnick TM. MTP40 is not present in all strains of mycobacterium tuberculosis Journal of Investigative Medicine. 44.  0.369
1995 Shinnick TM, Good RC. Diagnostic mycobacteriology laboratory practices Clinical Infectious Diseases. 21: 291-299. PMID 8562734 DOI: 10.1093/Clinids/21.2.291  0.458
1995 Kapur V, Li LL, Hamrick MR, Plikaytis BB, Shinnick TM, Telenti A, Jacobs WR, Banerjee A, Cole S, Yuen KY. Rapid Mycobacterium species assignment and unambiguous identification of mutations associated with antimicrobial resistance in Mycobacterium tuberculosis by automated DNA sequencing. Archives of Pathology & Laboratory Medicine. 119: 131-8. PMID 7848059  0.452
1995 Shinnick TM, King CH, Quinn FD. Molecular biology, virulence, and pathogenicity of mycobacteria American Journal of the Medical Sciences. 309: 92-98. PMID 7847448  0.462
1995 Plikaytis B, Marden J, Woodley C, Butler W, Crawford J, Shinnick T. 282-PA10 Multiplex PCR specific for multidrug-resistant Mycobacterium tuberculosis strain W Tubercle and Lung Disease. 76: 18. DOI: 10.1016/0962-8479(95)90083-7  0.562
1994 Noordhoek GT, Kolk AH, Bjune G, Catty D, Dale JW, Fine PE, Godfrey-Faussett P, Cho SN, Shinnick T, Svenson SB. Sensitivity and specificity of PCR for detection of Mycobacterium tuberculosis: a blind comparison study among seven laboratories. Journal of Clinical Microbiology. 32: 277-284. PMID 8150935 DOI: 10.1128/Jcm.32.2.277-284.1994  0.329
1994 Kikuta-Oshima LC, King CH, Shinnick TM, Quinn FD. Methods for the identification of virulence genes expressed in Mycobacterium tuberculosis strain H37Rv Annals of the New York Academy of Sciences. 730: 263-265. PMID 8080182 DOI: 10.1111/J.1749-6632.1994.Tb44260.X  0.438
1994 Mundayoor S, Shinnick TM. Identification of genes involved in the resistance of mycobacteria to killing by macrophages Annals of the New York Academy of Sciences. 730: 26-36. PMID 8080180 DOI: 10.1111/J.1749-6632.1994.Tb44236.X  0.385
1994 Miller LP, Crawford JT, Shinnick TM. The rpoB gene of Mycobacterium tuberculosis. Antimicrobial Agents and Chemotherapy. 38: 805-11. PMID 8031050 DOI: 10.1128/Aac.38.4.805  0.539
1994 Plikaytis BB, Marden JL, Crawford JT, Woodley CL, Butler WR, Shinnick TM. Multiplex PCR assay specific for the multidrug-resistant strain W of Mycobacterium tuberculosis Journal of Clinical Microbiology. 32: 1542-1546. PMID 7915723 DOI: 10.1128/Jcm.32.6.1542-1546.1994  0.475
1994 Mustafa AS, Deggerdal A, Lundin KEA, Meloen RM, Shinnick TM, Oftung F. An HLA-DRw53-restricted T-cell epitope from a novel Mycobacterium leprae protein antigen important to the human memory T-cell repertoire against M. leprae Infection and Immunity. 62: 5595-5602. PMID 7525488 DOI: 10.1128/Iai.62.12.5595-5602.1994  0.304
1993 King CH, Mundayoor S, Crawford JT, Shinnick TM. Expression of contact-dependent cytolytic activity by Mycobacterium tuberculosis and isolation of the genomic locus that encodes the activity Infection and Immunity. 61: 2708-2712. PMID 8500911 DOI: 10.1128/Iai.61.6.2708-2712.1993  0.41
1993 Van Embden JDA, Cave MD, Crawford JT, Dale JW, Eisenach KD, Gicquel B, Hermans P, Martin C, McAdam R, Shinnick TM, Small PM. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: Recommendations for a standardized methodology Journal of Clinical Microbiology. 31: 406-409. PMID 8381814 DOI: 10.1128/Jcm.31.2.406-409.1993  0.49
1993 Ellner JJ, Hinman AR, Dooley SW, Fischl MA, Sepkowitz KA, Goldberger MJ, Shinnick TM, Iseman MD, Jacobs WR. Tuberculosis Symposium: Emerging Problems and Promise Journal of Infectious Diseases. 168: 537-551. PMID 8354898 DOI: 10.1093/Infdis/168.3.537  0.535
1993 Cooksey RC, Crawford JT, Jacobs WR, Shinnick TM. A rapid method for screening antimicrobial agents for activities against a strain of Mycobacterium tuberculosis expressing firefly luciferase Antimicrobial Agents and Chemotherapy. 37: 1348-1352. PMID 8328785 DOI: 10.1128/Aac.37.6.1348  0.454
1993 Walker LL, Van Landingham RM, Shinnick TM. Clarithromycin is bactericidal against strains of Mycobacterium leprae resistant and susceptible to dapsone and rifampin International Journal of Leprosy. 61: 59-65. PMID 8326182  0.43
1993 Plikaytis BB, Crawford JT, Woodley CL, Butler WR, Eisenach KD, Cave MD, Shinnick TM. Rapid, amplification-based fingerprinting of Mycobacterium tuberculosis. Journal of General Microbiology. 139: 1537-42. PMID 8103790 DOI: 10.1099/00221287-139-7-1537  0.428
1992 Plikaytis BB, Plikaytis BD, Yakrus MA, Butler WR, Woodley CL, Silcox VA, Shinnick TM. Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis. Journal of Clinical Microbiology. 30: 1815-22. PMID 1352786 DOI: 10.1128/Jcm.30.7.1815-1822.1992  0.391
1991 Plikaytis BB, Eisenach KD, Crawford JT, Shinnick TM. Differentiation of Mycobacterium tuberculosis and Mycobacterium bovis BCG by a polymerase chain reaction assay Molecular and Cellular Probes. 5: 215-219. PMID 1908051 DOI: 10.1016/0890-8508(91)90043-J  0.405
1989 Shinnick TM, Plikaytis BB, Hyche AD, van Landingham RM, Walker LL. The Mycobacterium tuberculosis BCG-A protein has homology with the Escherichia coli groes protein Nucleic Acids Research. 17: 1254. PMID 2564178 DOI: 10.1093/Nar/17.3.1254  0.384
1987 Shinnick TM, Sweetser D, Thole J, van Embden J, Young RA. The etiologic agents of leprosy and tuberculosis share an immunoreactive protein antigen with the vaccine strain Mycobacterium bovis BCG Infection and Immunity. 55: 1932-1935. PMID 2440811 DOI: 10.1128/Iai.55.8.1932-1935.1987  0.326
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