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Rong Lu - Publications

Affiliations: 
2014- Stem Cell University of Southern California Keck School of Medicine 
Area:
Hematopoietic Stem Cells, Cellular Heterogeneity, Clonal Tracking
Website:
https://ronglulab.usc.edu/
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57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Jiang D, Chowdhury AY, Nogalska A, Contreras J, Lee Y, Vergel-Rodriguez M, Valenzuela M, Lu R. Quantitative association between gene expression and blood cell production of individual hematopoietic stem cells in mice. Science Advances. 10: eadk2132. PMID 38277455 DOI: 10.1126/sciadv.adk2132  0.793
2024 Liu Y, Hu W, Xie Y, Tang J, Ma H, Li J, Nie J, Wang Y, Gao Y, Cheng C, Li C, Ma Y, Su S, Zhang Z, Bao Y, ... ... Lu R, et al. Single-cell transcriptomics enable the characterization of local extension in retinoblastoma. Communications Biology. 7: 11. PMID 38172218 DOI: 10.1038/s42003-023-05732-y  0.324
2023 Bramlett C, Eerdeng J, Jiang D, Lee Y, Garcia I, Vergel-Rodriguez MC, Condie P, Nogalska A, Lu R. RNA splicing factor Rbm25 underlies heterogeneous preleukemic clonal expansion in mice. Blood. PMID 36947858 DOI: 10.1182/blood.2023019620  0.737
2023 Wang Z, Jiang D, Vergel-Rodriguez M, Nogalska A, Lu R. Lineage tracking to reveal the fate of hematopoietic stem cells influenced by Flk2 multipotent progenitors after transplantation. Experimental & Molecular Medicine. PMID 36639717 DOI: 10.1038/s12276-022-00922-w  0.77
2022 Tran E, Shi T, Li X, Chowdhury AY, Jiang D, Liu Y, Wang H, Yan C, Wallace WD, Lu R, Ryan AL, Marconett CN, Zhou B, Borok Z, Offringa IA. Development of human alveolar epithelial cell models to study distal lung biology and disease. Iscience. 25: 103780. PMID 35169685 DOI: 10.1016/j.isci.2022.103780  0.771
2021 Contreras-Trujillo H, Eerdeng J, Akre S, Jiang D, Contreras J, Gala B, Vergel-Rodriguez MC, Lee Y, Jorapur A, Andreasian A, Harton L, Bramlett CS, Nogalska A, Xiao G, Lee JW, ... ... Lu R, et al. Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses. Nature Communications. 12: 6522. PMID 34764253 DOI: 10.1038/s41467-021-26771-1  0.666
2021 Hao J, Zhou H, Nemes K, Yen D, Zhao W, Bramlett C, Wang B, Lu R, Shen K. Membrane-bound SCF and VCAM-1 synergistically regulate the morphology of hematopoietic stem cells. The Journal of Cell Biology. 220. PMID 34402812 DOI: 10.1083/jcb.202010118  0.798
2021 Li JM, Kim S, Zhang Y, Bian F, Hu J, Lu R, Pflugfelder SC, Chen R, Li DQ. Single-Cell Transcriptomics Identifies a Unique Entity and Signature Markers of Transit-Amplifying Cells in Human Corneal Limbus. Investigative Ophthalmology & Visual Science. 62: 36. PMID 34297801 DOI: 10.1167/iovs.62.9.36  0.417
2020 Li DQ, Kim S, Li J, Gao Q, Choi J, Bian F, Hu J, Zhang Y, Li J, Lu R, Li Y, Pflugfelder SC, Miao H, Chen R. Single-cell transcriptomics identifies limbal stem cell population and cell types mapping its differentiation trajectory in limbal basal epithelium of human cornea. The Ocular Surface. PMID 33388438 DOI: 10.1016/j.jtos.2020.12.004  0.384
2020 Popat V, Lu R, Ahmed M, Park JY, Xie Y, Gerber DE. Lack of Association Between Radiographic Tumor Burden and Efficacy of Immune Checkpoint Inhibitors in Advanced Lung Cancer. The Oncologist. PMID 32233048 DOI: 10.1634/Theoncologist.2019-0814  0.337
2020 Bramlett C, Jiang D, Nogalska A, Eerdeng J, Contreras J, Lu R. Clonal tracking using embedded viral barcoding and high-throughput sequencing. Nature Protocols. PMID 32132718 DOI: 10.1038/S41596-019-0290-Z  0.715
2020 Zhou H, Nguyen L, Arnesano C, Ando Y, Raval M, Rodgers JT, Fraser S, Lu R, Shen K. Non-invasive Optical Biomarkers Distinguish and Track the Metabolic Status of Single Hematopoietic Stem Cells. Iscience. 23: 100831. PMID 31982780 DOI: 10.1016/J.Isci.2020.100831  0.681
2020 Lu R, Xie D, Gloria-McCutchen Y, Saltarski J, Itzstein MSv, Hsieh D, Watters MK, Bleiberg BA, Popat V, Ahmed M, Fattah F, Gerber DE, Khan S, Park J, Wakeland E, et al. Correlating immune toxicity, blood cell counts, and overall survival in cancer patients receiving immune therapy. Journal of Clinical Oncology. 38: 3043-3043. DOI: 10.1200/Jco.2020.38.15_Suppl.3043  0.316
2019 Fan X, Wu C, Truitt LL, Espinoza DA, Sellers S, Bonifacino A, Zhou Y, Cordes SF, Krouse A, Metzger M, Donahue RE, Lu R, Dunbar CE. Clonal tracking of erythropoiesis in rhesus macaques. Haematologica. PMID 31582555 DOI: 10.3324/Haematol.2019.231811  0.547
2019 Wang D, Lu R, Rempala G, Sadee W. Ligand-Free Estrogen Receptor Alpha (ESR1) as Master Regulator for the Expression of CYP3A4 and other Cytochrome P450s (CYPs) in Human Liver. Molecular Pharmacology. PMID 31399483 DOI: 10.1124/Mol.119.116897  0.334
2019 Espinoza DA, Fan X, Yang D, Cordes SF, Truitt LL, Calvo KR, Yabe IM, Demirci S, Hope KJ, Hong SG, Krouse A, Metzger M, Bonifacino A, Lu R, Uchida N, et al. Aberrant Clonal Hematopoiesis following Lentiviral Vector Transduction of HSPCs in a Rhesus Macaque. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 31023523 DOI: 10.1016/J.Ymthe.2019.04.003  0.49
2019 Tang Z, Ma H, Mao Y, Ai S, Zhang P, Nie C, Gao Y, Lu R. Identification of stemness in primary retinoblastoma cells by analysis of stem-cell phenotypes and tumorigenicity with culture and xenograft models. Experimental Cell Research. PMID 30935947 DOI: 10.1016/j.yexcr.2019.03.034  0.401
2019 Lu R, Czechowicz A, Seita J, Jiang D, Weissman IL. Clonal-level lineage commitment pathways of hematopoietic stem cells in vivo. Proceedings of the National Academy of Sciences of the United States of America. PMID 30622181 DOI: 10.1073/Pnas.1801480116  0.804
2018 Wu C, Espinoza DA, Koelle SJ, Yang D, Truitt L, Schlums H, Lafont BA, Davidson-Moncada JK, Lu R, Kaur A, Hammer Q, Li B, Panch S, Allan DA, Donahue RE, et al. Clonal expansion and compartmentalized maintenance of rhesus macaque NK cell subsets. Science Immunology. 3. PMID 30389798 DOI: 10.1126/Sciimmunol.Aat9781  0.446
2018 Wang T, Lu R, Kapur P, Jaiswal BS, Hannan R, Zhang Z, Pedrosa I, Luke JJ, Zhang H, Goldstein LD, Yousuf Q, Gu YF, McKenzie T, Joyce A, Kim MS, et al. An Empirical Approach Leveraging Tumorgrafts to Dissect the Tumor Microenvironment in Renal Cell Carcinoma Identifies Missing Link to Prognostic Inflammatory Factors. Cancer Discovery. PMID 29884728 DOI: 10.1158/2159-8290.Cd-17-1246  0.386
2018 Nguyen L, Wang Z, Chowdhury AY, Chu E, Eerdeng J, Jiang D, Lu R. Functional compensation between hematopoietic stem cell clones . Embo Reports. PMID 29848511 DOI: 10.15252/Embr.201745702  0.765
2018 Yu KR, Espinoza DA, Wu C, Truitt L, Shin TH, Chen S, Fan X, Yabe I, Panch S, Hong SG, Koelle S, Lu R, Bonifacino A, Krouse A, Metzger M, et al. The impact of aging on primate hematopoiesis as interrogated by clonal tracking. Blood. PMID 29295845 DOI: 10.1182/Blood-2017-08-802033  0.353
2017 Wu C, Espinoza DA, Koelle SJ, Potter EL, Lu R, Li B, Yang D, Fan X, Donahue RE, Roederer M, Dunbar CE. Geographic clonal tracking in macaques provides insights into HSPC migration and differentiation. The Journal of Experimental Medicine. PMID 29141868 DOI: 10.1084/Jem.20171341  0.422
2017 Jiang M, Li H, Zhang Y, Yang Y, Lu R, Liu K, Lin S, Lan X, Wang H, Wu H, Zhu J, Zhou Z, Xu J, Lee DK, Zhang L, et al. Transitional basal cells at the squamous-columnar junction generate Barrett's oesophagus. Nature. PMID 29019984 DOI: 10.1038/Nature24269  0.387
2017 Wahlestedt M, Erlandsson E, Kristiansen T, Lu R, Brakebusch C, Weissman IL, Yuan J, Martin-Gonzalez J, Bryder D. Clonal reversal of ageing-associated stem cell lineage bias via a pluripotent intermediate. Nature Communications. 8: 14533. PMID 28224997 DOI: 10.1038/Ncomms14533  0.69
2017 Koelle SJ, Espinoza DA, Wu C, Xu J, Lu R, Li B, Donahue RE, Dunbar CE. Quantitative Stability of Hematopoietic Stem and Progenitor Cell Clonal Output in Transplanted Rhesus Macaques. Blood. PMID 28087539 DOI: 10.1182/Blood-2016-07-728691  0.52
2017 Espinoza DA, Wu C, Fan X, Yang D, Yabe IM, Demirci S, Hong SG, Bonifacino A, Krouse A, Metzger M, Lu R, Calvo KR, Tisdale JF, Wu X, Ravin SSD, et al. Aberrant Clonal Hematopoiesis of the Erythroid and Myeloid Lineages in a Lentivirally Barcoded Rhesus Macaque Blood. 130: 606-606. DOI: 10.1182/Blood.V130.Suppl_1.606.606  0.386
2016 Quan Y, Zhang X, Xu S, Li K, Zhu F, Li Q, Cai X, Lu R. Tcf7l2 Localization of Putative Stem/Progenitor Cells in Mouse Conjunctiva. American Journal of Physiology. Cell Physiology. ajpcell.00014.2016. PMID 27281479 DOI: 10.1152/ajpcell.00014.2016  0.415
2016 Brewer C, Chu E, Chin M, Lu R. Transplantation Dose Alters the Differentiation Program of Hematopoietic Stem Cells. Cell Reports. PMID 27184851 DOI: 10.1016/J.Celrep.2016.04.061  0.801
2016 Wu C, Espinoza DA, Koelle SJ, Yang D, Schlums H, Davidson-Moncada JK, Lu R, Kaur A, Quirin H, Li B, Panch SR, Donahue RE, Childs RW, Romagnani C, Bryceson Y, et al. Clonal Expansion and Long-Term Persistence of Rhesus Macaque NK Cells with an Adaptive Phenotype Blood. 128: 549-549. DOI: 10.1182/Blood.V128.22.549.549  0.342
2016 Lu R, Nguyen L. Clonal Compensation Between Hematopoietic Stem Cells upon Differentiation Deficiency Blood. 128: 422-422. DOI: 10.1182/blood.v128.22.422.422  0.478
2016 Nguyen L, Lu R. Clonal compensation between hematopoietic stem cells upon differentiation deficiency Experimental Hematology. 44: S92. DOI: 10.1182/Blood.V128.22.422.422  0.488
2016 Jiang D, Lu R. Hematopoietic stem cell heterogeneity is determined at the clonal level Experimental Hematology. 44: S82. DOI: 10.1016/j.exphem.2016.06.165  0.744
2015 Lu R, Smith RM, Seweryn M, Wang D, Hartmann K, Webb A, Sadee W, Rempala GA. Analyzing allele specific RNA expression using mixture models. Bmc Genomics. 16: 566. PMID 26231172 DOI: 10.1186/S12864-015-1749-0  0.313
2015 Yu K, Wu C, Espinoza D, Yabe I, Panch SR, Hong SG, Koelle SJ, Lu R, Bonifacino A, Krouse A, Metzger M, Donahue R, Dunbar CE. The Impact of Aging of Hematopoietic Stem and Progenitor Cells (HSPCs) in Non-Human Primates As Interrogated By Genetic Barcode Clonal Tracking Blood. 126: 1151-1151. DOI: 10.1182/Blood.V126.23.1151.1151  0.371
2014 Lu R. Sleeping beauty wakes up the clonal succession model for homeostatic hematopoiesis. Cell Stem Cell. 15: 677-8. PMID 25479744 DOI: 10.1016/J.Stem.2014.11.015  0.332
2014 Wu C, Li B, Lu R, Koelle SJ, Yang Y, Jares A, Krouse AE, Metzger M, Liang F, Loré K, Wu CO, Donahue RE, Chen IS, Weissman I, Dunbar CE. Clonal tracking of rhesus macaque hematopoiesis highlights a distinct lineage origin for natural killer cells. Cell Stem Cell. 14: 486-99. PMID 24702997 DOI: 10.1016/J.Stem.2014.01.020  0.574
2014 Dimov IK, Lu R, Lee EP, Seita J, Sahoo D, Park SM, Weissman IL, Lee LP. Discriminating cellular heterogeneity using microwell-based RNA cytometry. Nature Communications. 5: 3451. PMID 24667995 DOI: 10.1038/Ncomms4451  0.802
2014 Yin N, Lu R, Lin J, Zhi S, Tian J, Zhu J. Islet-1 promotes the cardiac-specific differentiation of mesenchymal stem cells through the regulation of histone acetylation. International Journal of Molecular Medicine. 33: 1075-82. PMID 24604334 DOI: 10.3892/ijmm.2014.1687  0.373
2014 Koelle S, Wu C, Li B, Lu R, Donahue RE, Dunbar CE. Long-Term Hematopoietic Clonal Stability Tracked Using Molecular Barcoding in Non-Human Primates Blood. 124: 2908-2908. DOI: 10.1182/Blood.V124.21.2908.2908  0.428
2013 Wu C, Davidson-Moncada JK, Lu R, Li B, Krouse AE, Metzger ME, Donahue RE, Weissman IL, Childs R, Dunbar CE. The Unique Ontogeny Of Natural Killer Cells As Revealed By Genetic Barcoding In The Nonhuman Primate Model Blood. 122: 15-15. DOI: 10.1182/Blood.V122.21.15.15  0.445
2012 Chen M, Huang J, Yang X, Liu B, Zhang W, Huang L, Deng F, Ma J, Bai Y, Lu R, Huang B, Gao Q, Zhuo Y, Ge J. Serum starvation induced cell cycle synchronization facilitates human somatic cells reprogramming. Plos One. 7: e28203. PMID 22529890 DOI: 10.1371/journal.pone.0028203  0.373
2012 Lu R, Qu Y, Ge J, Zhang L, Su Z, Pflugfelder SC, Li DQ. Transcription factor TCF4 maintains the properties of human corneal epithelial stem cells. Stem Cells (Dayton, Ohio). 30: 753-61. PMID 22232078 DOI: 10.1002/stem.1032  0.374
2012 Lu R, Czechowicz A, Seita J, Weissman IL. Clonal Level Lineage Commitment of Mouse Hematopoietic Stem Cells in Vivo Blood. 120: 27-27. DOI: 10.1182/Blood.V120.21.27.27  0.823
2011 Lu R, Zhang X, Huang D, Huang B, Gao N, Wang Z, Ge J. Conjunctival reconstruction with progenitor cell-derived autologous epidermal sheets in rhesus monkey. Plos One. 6: e25713. PMID 22096478 DOI: 10.1371/journal.pone.0025713  0.336
2011 Lu R, Neff NF, Quake SR, Weissman IL. Tracking single hematopoietic stem cells in vivo using high-throughput sequencing in conjunction with viral genetic barcoding. Nature Biotechnology. 29: 928-33. PMID 21964413 DOI: 10.1038/Nbt.1977  0.637
2011 Lu R, Bian F, Zhang X, Qi H, Chuang EY, Pflugfelder SC, Li DQ. The β-catenin/Tcf4/survivin signaling maintains a less differentiated phenotype and high proliferative capacity of human corneal epithelial progenitor cells. The International Journal of Biochemistry & Cell Biology. 43: 751-9. PMID 21292023 DOI: 10.1016/j.biocel.2011.01.018  0.394
2011 Lu R, Czechowicz A, Weissman IL. Transplantation Conditioning Regimens Induce Different Hematopoietic Stem Cell Differentiation in Mice At the Clonal Level Blood. 118: 140-140. DOI: 10.1182/Blood.V118.21.140.140  0.78
2010 Bian F, Liu W, Yoon KC, Lu R, Zhou N, Ma P, Pflugfelder SC, Li DQ. Molecular signatures and biological pathway profiles of human corneal epithelial progenitor cells. The International Journal of Biochemistry & Cell Biology. 42: 1142-53. PMID 20363357 DOI: 10.1016/j.biocel.2010.03.022  0.44
2010 Liu X, Lu R, Wu S, Sun J. Salmonella regulation of intestinal stem cells through the Wnt/beta-catenin pathway. Febs Letters. 584: 911-6. PMID 20083111 DOI: 10.1016/j.febslet.2010.01.024  0.319
2009 Lu R, Markowetz F, Unwin RD, Leek JT, Airoldi EM, MacArthur BD, Lachmann A, Rozov R, Ma'ayan A, Boyer LA, Troyanskaya OG, Whetton AD, Lemischka IR. Systems-level dynamic analyses of fate change in murine embryonic stem cells. Nature. 462: 358-62. PMID 19924215 DOI: 10.1038/Nature08575  0.667
2009 Wu AR, Hiatt JB, Lu R, Attema JL, Lobo NA, Weissman IL, Clarke MF, Quake SR. Automated microfluidic chromatin immunoprecipitation from 2,000 cells. Lab On a Chip. 9: 1365-70. PMID 19417902 DOI: 10.1039/B819648F  0.453
2009 Wang X, Sun DF, Lu R, Chen ZF, Chen YX, Fang JY. RAF may induce cell proliferation through hypermethylation of tumor suppressor gene promoter in gastric epithelial cells. Cancer Science. 100: 117-25. PMID 19037990 DOI: 10.1111/j.1349-7006.2008.01017.x  0.306
2008 Guan Y, Myers CL, Lu R, Lemischka IR, Bult CJ, Troyanskaya OG. A genomewide functional network for the laboratory mouse. Plos Computational Biology. 4: e1000165. PMID 18818725 DOI: 10.1371/Journal.Pcbi.1000165  0.587
2007 Lu R, Ge J, Huang B, Huang DP, Gao N, Wei YT, Wang ZC, Peng Z. [Induction of epidermal stem cells of rhesus monkey into human conjunctival epithelial cells: an in vitro experiment]. Zhonghua Yi Xue Za Zhi. 85: 2554-8. PMID 16321302  0.387
2006 Ivanova N, Dobrin R, Lu R, Kotenko I, Levorse J, DeCoste C, Schafer X, Lun Y, Lemischka IR. Dissecting self-renewal in stem cells with RNA interference. Nature. 442: 533-8. PMID 16767105 DOI: 10.1038/Nature04915  0.67
2005 Liu G, Hu YY, Zhao JN, Wu SJ, Xiong Z, Lu R. Effect of type I collagen on the adhesion, proliferation, and osteoblastic gene expression of bone marrow-derived mesenchymal stem cells. Chinese Journal of Traumatology = Zhonghua Chuang Shang Za Zhi. 7: 358-62. PMID 15566693  0.348
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