| Year |
Citation |
Score |
| 2023 |
Rossi P, Xing Q, Bini E, Portaliou AG, Clay MC, Warren EM, Khanra NK, Economou A, Kalodimos CG. Chaperone Recycling in Late-Stage Flagellar Assembly. Journal of Molecular Biology. 167954. PMID 37330284 DOI: 10.1016/j.jmb.2023.167954 |
0.767 |
|
| 2021 |
Clay MC, Saleh T, Kamatham S, Rossi P, Kalodimos CG. Progress toward automated methyl assignments for methyl-TROSY applications. Structure (London, England : 1993). PMID 34914892 DOI: 10.1016/j.str.2021.11.009 |
0.502 |
|
| 2021 |
Xie T, Saleh T, Rossi P, Miller D, Kalodimos CG. Imatinib can act as an Allosteric Activator of Abl Kinase. Journal of Molecular Biology. 434: 167349. PMID 34774565 DOI: 10.1016/j.jmb.2021.167349 |
0.532 |
|
| 2020 |
Xie T, Saleh T, Rossi P, Kalodimos CG. Conformational states dynamically populated by a kinase determine its function. Science (New York, N.Y.). PMID 33004676 DOI: 10.1126/science.abc2754 |
0.56 |
|
| 2020 |
Clay MC, Kalodimos CG. Adding Substituent Nonadditivity in Protein Allostery by NMR. Biophysical Journal. PMID 32857961 DOI: 10.1016/J.Bpj.2020.07.037 |
0.309 |
|
| 2020 |
Davra V, Saleh T, Geng K, Kimani S, Mehta D, Kasikara C, Smith B, Colangelo NW, Ciccarelli B, Li H, Azzam EI, Kalodimos CG, Birge RB, Kumar S. Cyclophilin A inhibitor Debio-025 targets Crk, reduces metastasis, and induces tumor immunogenicity in breast cancer. Molecular Cancer Research : McR. PMID 32321766 DOI: 10.1158/1541-7786.Mcr-19-1144 |
0.543 |
|
| 2019 |
Jiang Y, Rossi P, Kalodimos CG. Structural basis for client recognition and activity of Hsp40 chaperones. Science (New York, N.Y.). 365: 1313-1319. PMID 31604242 DOI: 10.1126/Science.Aax1280 |
0.414 |
|
| 2019 |
Rossi P, Monneau YR, Xia Y, Ishida Y, Kalodimos CG. Toolkit for NMR Studies of Methyl-Labeled Proteins. Methods in Enzymology. 614: 107-142. PMID 30611422 DOI: 10.1016/Bs.Mie.2018.08.036 |
0.311 |
|
| 2018 |
Xing Q, Shi K, Portaliou A, Rossi P, Economou A, Kalodimos CG. Structures of chaperone-substrate complexes docked onto the export gate in a type III secretion system. Nature Communications. 9: 1773. PMID 29720631 DOI: 10.1038/S41467-018-04137-4 |
0.462 |
|
| 2018 |
Saio T, Kawagoe S, Ishimori K, Kalodimos CG. Oligomerization of a molecular chaperone modulates its activity. Elife. 7. PMID 29714686 DOI: 10.7554/Elife.35731 |
0.471 |
|
| 2018 |
Jiang Y, Kalodimos CG. Confirmation for conformational selection. Elife. 7. PMID 29460777 DOI: 10.7554/Elife.34923 |
0.308 |
|
| 2018 |
Xie T, Saleh T, Kalodimos CG. Gleevec Can Act as an Allosteric Activator of ABL Kinase Biophysical Journal. 114: 229a. DOI: 10.1016/J.Bpj.2017.11.1274 |
0.521 |
|
| 2017 |
Xia Y, Rossi P, Subrahmanian MV, Huang C, Saleh T, Olivieri C, Kalodimos CG, Veglia G. Enhancing the sensitivity of multidimensional NMR experiments by using triply-compensated π pulses. Journal of Biomolecular Nmr. PMID 29164453 DOI: 10.1007/S10858-017-0153-2 |
0.515 |
|
| 2017 |
Portaliou AG, Tsolis KC, Loos MS, Balabanidou V, Rayo J, Tsirigotaki A, Crepin VF, Frankel G, Kalodimos CG, Karamanou S, Economou A. Hierarchical protein targeting and secretion is controlled by an affinity switch in the type III secretion system of enteropathogenic Escherichia coli. The Embo Journal. PMID 29109154 DOI: 10.15252/Embj.201797515 |
0.369 |
|
| 2017 |
Monneau YR, Rossi P, Bhaumik A, Huang C, Jiang Y, Saleh T, Xie T, Xing Q, Kalodimos CG. Automatic methyl assignment in large proteins by the MAGIC algorithm. Journal of Biomolecular Nmr. PMID 29098507 DOI: 10.1007/S10858-017-0149-Y |
0.547 |
|
| 2017 |
Saleh T, Rossi P, Kalodimos CG. Atomic view of the energy landscape in the allosteric regulation of Abl kinase. Nature Structural & Molecular Biology. PMID 28945248 DOI: 10.1038/Nsmb.3470 |
0.595 |
|
| 2017 |
Jiang Y, Kalodimos CG. NMR studies of large proteins. Journal of Molecular Biology. PMID 28728982 DOI: 10.1016/J.Jmb.2017.07.007 |
0.409 |
|
| 2017 |
Chatzi KE, Sardis MF, Tsirigotaki A, Koukaki M, Šoštarić N, Konijnenberg A, Sobott F, Kalodimos CG, Karamanou S, Economou A. Preprotein mature domains contain translocase targeting signals that are essential for secretion. The Journal of Cell Biology. PMID 28404644 DOI: 10.1083/Jcb.201609022 |
0.319 |
|
| 2017 |
Saleh T, Kalodimos CG. Enzymes at work are enzymes in motion. Science (New York, N.Y.). 355: 247-248. PMID 28104853 DOI: 10.1126/Science.Aal4632 |
0.532 |
|
| 2017 |
Kalodimos CG, Saleh T, Rossi P. Abl 1b Regulatory Module 'inhibiting state' Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb6Amv/Pdb |
0.506 |
|
| 2017 |
Kalodimos CG, Rossi P, Saleh T. Abl1b Regulatory Module 'Activating' conformation Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr30332 |
0.542 |
|
| 2016 |
Rossi P, Xia Y, Khanra N, Veglia G, Kalodimos CG. (15)N and (13)C- SOFAST-HMQC editing enhances 3D-NOESY sensitivity in highly deuterated, selectively [(1)H,(13)C]-labeled proteins. Journal of Biomolecular Nmr. PMID 27878649 DOI: 10.1007/S10858-016-0074-5 |
0.749 |
|
| 2016 |
Khanra N, Rossi P, Economou A, Kalodimos CG. Recognition and targeting mechanisms by chaperones in flagellum assembly and operation. Proceedings of the National Academy of Sciences of the United States of America. PMID 27528687 DOI: 10.1073/Pnas.1607845113 |
0.788 |
|
| 2016 |
Huang C, Rossi P, Saio T, Kalodimos CG. Structural basis for the antifolding activity of a molecular chaperone. Nature. PMID 27501151 DOI: 10.1038/Nature18965 |
0.463 |
|
| 2016 |
Monneau YR, Ishida Y, Rossi P, Saio T, Tzeng SR, Inouye M, Kalodimos CG. Exploiting E. coli auxotrophs for leucine, valine, and threonine specific methyl labeling of large proteins for NMR applications. Journal of Biomolecular Nmr. PMID 27255761 DOI: 10.1007/S10858-016-0041-1 |
0.316 |
|
| 2016 |
Huang C, Saio T, Rossi P, Kalodimos CG. The structure of chaperone SecB in complex with unstructured MBP binding site e Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb5Jtm/Pdb |
0.37 |
|
| 2016 |
Huang C, Saio T, Rossi P, Kalodimos CG. The structure of chaperone SecB in complex with unstructured proPhoA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb5Jtl/Pdb |
0.324 |
|
| 2015 |
Tzeng SR, Kalodimos CG. The role of slow and fast protein motions in allosteric interactions. Biophysical Reviews. 7: 251-255. PMID 28510174 DOI: 10.1007/S12551-015-0172-8 |
0.427 |
|
| 2015 |
Saleh T, Jankowski W, Sriram G, Rossi P, Shah S, Lee KB, Cruz LA, Rodriguez AJ, Birge RB, Kalodimos CG. Cyclophilin A promotes cell migration via the Abl-Crk signaling pathway. Nature Chemical Biology. PMID 26656091 DOI: 10.1038/Nchembio.1981 |
0.688 |
|
| 2015 |
Xie T, Kalodimos CG. NMR illuminates the pathways to ALS. Elife. 4. PMID 26099301 DOI: 10.7554/Elife.08679 |
0.346 |
|
| 2015 |
Tzeng SR, Kalodimos CG. The role of slow and fast protein motions in allosteric interactions Biophysical Reviews. 7: 251-255. DOI: 10.1007/s12551-015-0172-8 |
0.309 |
|
| 2014 |
Sriram G, Jankowski W, Kasikara C, Reichman C, Saleh T, Nguyen KQ, Li J, Hornbeck P, Machida K, Liu T, Li H, Kalodimos CG, Birge RB. Iterative tyrosine phosphorylation controls non-canonical domain utilization in Crk. Oncogene. PMID 25381819 DOI: 10.1038/Onc.2014.361 |
0.683 |
|
| 2014 |
Saio T, Guan X, Rossi P, Economou A, Kalodimos CG. Structural basis for protein antiaggregation activity of the trigger factor chaperone. Science (New York, N.Y.). 344: 1250494. PMID 24812405 DOI: 10.1126/Science.1250494 |
0.467 |
|
| 2013 |
Tinberg CE, Khare SD, Dou J, Doyle L, Nelson JW, Schena A, Jankowski W, Kalodimos CG, Johnsson K, Stoddard BL, Baker D. Computational design of ligand-binding proteins with high affinity and selectivity. Nature. 501: 212-6. PMID 24005320 DOI: 10.1038/Nature12443 |
0.595 |
|
| 2013 |
Tzeng SR, Kalodimos CG. Allosteric inhibition through suppression of transient conformational states. Nature Chemical Biology. 9: 462-5. PMID 23644478 DOI: 10.1038/Nchembio.1250 |
0.408 |
|
| 2013 |
Saio T, Kalodimos CG. NMR disentangles a dynamic disaggregase machinery. Nature Structural & Molecular Biology. 20: 409-10. PMID 23552291 DOI: 10.1038/Nsmb.2551 |
0.405 |
|
| 2013 |
Chen L, Ai X, Portaliou AG, Minetti CA, Remeta DP, Economou A, Kalodimos CG. Substrate-activated conformational switch on chaperones encodes a targeting signal in type III secretion. Cell Reports. 3: 709-15. PMID 23523349 DOI: 10.1016/J.Celrep.2013.02.025 |
0.451 |
|
| 2013 |
Chen L, Ai X, Portaliou AG, Minetti CASA, Remeta DP, Economou A, Kalodimos CG. Erratum to Substrate-Activated Conformational Switch on Chaperones Encodes a Targeting Signal in Type III Secretion [Cell Reports 3, (2013) 1754-1755] Cell Reports. 3. DOI: 10.1016/J.Celrep.2013.05.018 |
0.37 |
|
| 2012 |
Tzeng SR, Kalodimos CG. Protein activity regulation by conformational entropy. Nature. 488: 236-40. PMID 22801505 DOI: 10.1038/Nature11271 |
0.494 |
|
| 2012 |
Jankowski W, Saleh T, Pai MT, Sriram G, Birge RB, Kalodimos CG. Domain organization differences explain Bcr-Abl's preference for CrkL over CrkII. Nature Chemical Biology. 8: 590-6. PMID 22581121 DOI: 10.1038/Nchembio.954 |
0.726 |
|
| 2012 |
Kalodimos CG. Protein function and allostery: a dynamic relationship. Annals of the New York Academy of Sciences. 1260: 81-6. PMID 22256894 DOI: 10.1111/J.1749-6632.2011.06319.X |
0.407 |
|
| 2012 |
Tzeng SR, Pai MT, Kalodimos CG. NMR studies of large protein systems. Methods in Molecular Biology (Clifton, N.J.). 831: 133-40. PMID 22167672 DOI: 10.1007/978-1-61779-480-3_8 |
0.376 |
|
| 2011 |
Chen L, Balabanidou V, Remeta DP, Minetti CA, Portaliou AG, Economou A, Kalodimos CG. Structural instability tuning as a regulatory mechanism in protein-protein interactions. Molecular Cell. 44: 734-44. PMID 22152477 DOI: 10.1016/J.Molcel.2011.09.022 |
0.514 |
|
| 2011 |
Sriram G, Reichman C, Tunceroglu A, Kaushal N, Saleh T, Machida K, Mayer B, Ge Q, Li J, Hornbeck P, Kalodimos CG, Birge RB. Phosphorylation of Crk on tyrosine 251 in the RT loop of the SH3C domain promotes Abl kinase transactivation. Oncogene. 30: 4645-55. PMID 21602891 DOI: 10.1038/Onc.2011.170 |
0.571 |
|
| 2011 |
Sarkar P, Saleh T, Tzeng SR, Birge RB, Kalodimos CG. Structural basis for regulation of the Crk signaling protein by a proline switch. Nature Chemical Biology. 7: 51-7. PMID 21131971 DOI: 10.1038/Nchembio.494 |
0.706 |
|
| 2011 |
Tzeng SR, Kalodimos CG. Protein dynamics and allostery: an NMR view. Current Opinion in Structural Biology. 21: 62-7. PMID 21109422 DOI: 10.1016/J.Sbi.2010.10.007 |
0.428 |
|
| 2009 |
Tzeng SR, Kalodimos CG. Dynamic activation of an allosteric regulatory protein. Nature. 462: 368-72. PMID 19924217 DOI: 10.1038/Nature08560 |
0.49 |
|
| 2009 |
Gouridis G, Karamanou S, Gelis I, Kalodimos CG, Economou A. Signal peptides are allosteric activators of the protein translocase. Nature. 462: 363-7. PMID 19924216 DOI: 10.1038/Nature08559 |
0.342 |
|
| 2009 |
Birge RB, Kalodimos C, Inagaki F, Tanaka S. Crk and CrkL adaptor proteins: networks for physiological and pathological signaling. Cell Communication and Signaling : Ccs. 7: 13. PMID 19426560 DOI: 10.1186/1478-811X-7-13 |
0.349 |
|
| 2009 |
Popovych N, Tzeng SR, Tonelli M, Ebright RH, Kalodimos CG. Structural basis for cAMP-mediated allosteric control of the catabolite activator protein. Proceedings of the National Academy of Sciences of the United States of America. 106: 6927-32. PMID 19359484 DOI: 10.1073/Pnas.0900595106 |
0.469 |
|
| 2008 |
Karamanou S, Bariami V, Papanikou E, Kalodimos CG, Economou A. Assembly of the translocase motor onto the preprotein-conducting channel. Molecular Microbiology. 70: 311-22. PMID 18761620 DOI: 10.1111/J.1365-2958.2008.06402.X |
0.405 |
|
| 2007 |
Gelis I, Bonvin AM, Keramisanou D, Koukaki M, Gouridis G, Karamanou S, Economou A, Kalodimos CG. Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR. Cell. 131: 756-69. PMID 18022369 DOI: 10.1016/J.Cell.2007.09.039 |
0.583 |
|
| 2007 |
Karamanou S, Gouridis G, Papanikou E, Sianidis G, Gelis I, Keramisanou D, Vrontou E, Kalodimos CG, Economou A. Preprotein-controlled catalysis in the helicase motor of SecA. The Embo Journal. 26: 2904-14. PMID 17525736 DOI: 10.1038/Sj.Emboj.7601721 |
0.384 |
|
| 2007 |
Sarkar P, Reichman C, Saleh T, Birge RB, Kalodimos CG. Proline cis-trans isomerization controls autoinhibition of a signaling protein. Molecular Cell. 25: 413-26. PMID 17289588 DOI: 10.1016/J.Molcel.2007.01.004 |
0.695 |
|
| 2006 |
Popovych N, Sun S, Ebright RH, Kalodimos CG. Dynamically driven protein allostery. Nature Structural & Molecular Biology. 13: 831-8. PMID 16906160 DOI: 10.1038/Nsmb1132 |
0.442 |
|
| 2006 |
Keramisanou D, Biris N, Gelis I, Sianidis G, Karamanou S, Economou A, Kalodimos CG. Disorder-order folding transitions underlie catalysis in the helicase motor of SecA. Nature Structural & Molecular Biology. 13: 594-602. PMID 16783375 DOI: 10.1038/Nsmb1108 |
0.357 |
|
| 2005 |
Papanikou E, Karamanou S, Baud C, Frank M, Sianidis G, Keramisanou D, Kalodimos CG, Kuhn A, Economou A. Identification of the preprotein binding domain of SecA. The Journal of Biological Chemistry. 280: 43209-17. PMID 16243836 DOI: 10.1074/Jbc.M509990200 |
0.389 |
|
| 2004 |
Kalodimos CG, Boelens R, Kaptein R. Toward an integrated model of protein-DNA recognition as inferred from NMR studies on the Lac repressor system. Chemical Reviews. 104: 3567-86. PMID 15303828 DOI: 10.1021/Cr0304065 |
0.76 |
|
| 2004 |
Kalodimos CG, Biris N, Bonvin AM, Levandoski MM, Guennuegues M, Boelens R, Kaptein R. Structure and flexibility adaptation in nonspecific and specific protein-DNA complexes. Science (New York, N.Y.). 305: 386-9. PMID 15256668 DOI: 10.1126/Science.1097064 |
0.792 |
|
| 2004 |
Durney MA, Wechselberger RW, Kalodimos CG, Kaptein R, Vorgias CE, Boelens R. An alternate conformation of the hyperthermostable HU protein from Thermotoga maritima has unexpectedly high flexibility. Febs Letters. 563: 49-54. PMID 15063721 DOI: 10.1016/S0014-5793(04)00247-9 |
0.748 |
|
| 2004 |
Kalodimos CG, Bonvin AMJJ, Boelens R, Kaptein R. Solution structure of a dimeric lactose DNA-binding domain complexed to a nonspecific DNA sequence Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.2210/Pdb1Osl/Pdb |
0.74 |
|
| 2002 |
Kalodimos CG, Bonvin AM, Salinas RK, Wechselberger R, Boelens R, Kaptein R. Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain. The Embo Journal. 21: 2866-76. PMID 12065400 DOI: 10.1093/Emboj/Cdf318 |
0.79 |
|
| 2002 |
Kalodimos CG, Boelens R, Kaptein R. A residue-specific view of the association and dissociation pathway in protein--DNA recognition. Nature Structural Biology. 9: 193-7. PMID 11850636 DOI: 10.1038/Nsb763 |
0.766 |
|
| 2002 |
Kalodimos C, Bonvin A, Salinas R, Wechselberger R, Boelens R, Kaptein R. Assignment of lac repressor headpiece complexed of its natural operator Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr5345 |
0.738 |
|
| 2001 |
Kalodimos CG, Folkers GE, Boelens R, Kaptein R. Strong DNA binding by covalently linked dimeric Lac headpiece: evidence for the crucial role of the hinge helices. Proceedings of the National Academy of Sciences of the United States of America. 98: 6039-44. PMID 11353825 DOI: 10.1073/Pnas.101129898 |
0.761 |
|
| 2000 |
Kalodimos CG, Gerothanassis IP, Pierattelli R, Troganis A. Multinuclear (13C, 17O, 57Fe) NMR studies of carbonmonoxy heme proteins and synthetic model compounds Journal of Inorganic Biochemistry. 79: 371-380. PMID 10830891 DOI: 10.1016/S0162-0134(99)00239-1 |
0.517 |
|
| 1999 |
Kalodimos CG, Gerothanassis IP, Rose E, Hawkes GE, Pierattelli R. Iron-57 nuclear shieldings as a quantitative tool for estimating porphyrin ruffling in hexacoordinated carbonmonoxy heme model compounds in solution Journal of the American Chemical Society. 121: 2903-2908. DOI: 10.1021/ja983889g |
0.482 |
|
| 1999 |
Kalodimos CG, Gerothanassis IP, Pierattelli R, Ancian B. Carbon-13 and Oxygen-17 Chemical Shifts, (16O/18O) Isotope Effects on13C Chemical Shifts, and Vibrational Frequencies of Carbon Monoxide in Various Solvents and of the Fe−C−O Unit in Carbonmonoxy Heme Proteins and Synthetic Model Compounds Inorganic Chemistry. 38: 4283-4293. DOI: 10.1021/Ic9814165 |
0.531 |
|
| 1998 |
Kalodimos CG, Gerothanassis IP, Hawkes GE. 13C- and 57Fe-NMR studies of the Fe-C-O unit of heme proteins and synthetic model compounds in solution: Comparison with IR vibrational frequencies and X-ray structural data Biospectroscopy. 4. PMID 9787915 DOI: 10.1002/(SICI)1520-6343(1998)4:5+3.0.CO;2-1 |
0.504 |
|
| 1998 |
Gerothanassis IP, Kalodimos CG, Hawkes GE, Haycock P. The Effects of Atropisomerism and Porphyrin Deformation on 57Fe Shieldings in Superstructured Hemoprotein Models Journal of Magnetic Resonance. 131: 163-165. PMID 9533921 DOI: 10.1006/JMRE.1997.1350 |
0.463 |
|
| 1998 |
Kalodimos CG, Gerothanassis IP, Troganis A, Loock B, Momenteau M. Journal of Biomolecular Nmr. 11: 423-435. DOI: 10.1023/A:1008253901009 |
0.66 |
|
| 1998 |
Kalodimos CG, Gerothanassis IP. Carbon-13 nuclear shieldings as a novel method in estimating porphyrin ruffling in hexacoordinated superstructured heme model compounds in solution [4] Journal of the American Chemical Society. 120: 6407-6408. DOI: 10.1021/ja980483v |
0.463 |
|
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