36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Tenthorey JL, Haloupek N, López-Blanco JR, Grob P, Adamson E, Hartenian E, Lind NA, Bourgeois NM, Chacón P, Nogales E, Vance RE. The structural basis of flagellin detection by NAIP5: A strategy to limit pathogen immune evasion. Science (New York, N.Y.). 358: 888-893. PMID 29146805 DOI: 10.1126/Science.Aao1140  0.6
2017 Artola M, Ruíz-Avila LB, Ramírez-Aportela E, Martínez RF, Araujo-Bazán L, Vázquez-Villa H, Martín-Fontecha M, Oliva MA, Martín-Galiano AJ, Chacón P, López-Rodríguez ML, Andreu JM, Huecas S. The structural assembly switch of cell division protein FtsZ probed with fluorescent allosteric inhibitors. Chemical Science. 8: 1525-1534. PMID 28616148 DOI: 10.1039/C6Sc03792E  0.4
2016 Kellogg EH, Howes S, Ti SC, Ramírez-Aportela E, Kapoor TM, Chacón P, Nogales E. Near-atomic cryo-EM structure of PRC1 bound to the microtubule. Proceedings of the National Academy of Sciences of the United States of America. PMID 27493215 DOI: 10.1073/Pnas.1609903113  0.6
2016 Ramírez-Aportela E, López-Blanco JR, Chacón P. FRODOCK 2.0: fast protein-protein docking server. Bioinformatics (Oxford, England). PMID 27153583 DOI: 10.1093/Bioinformatics/Btw141  0.6
2016 López-Blanco JR, Canosa-Valls AJ, Li Y, Chacón P. RCD+: Fast loop modeling server. Nucleic Acids Research. PMID 27151199 DOI: 10.1093/Nar/Gkw395  0.6
2016 Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Corrigendum: Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature. PMID 27096372 DOI: 10.1038/Nature17984  0.6
2016 Louder RK, He Y, López-Blanco JR, Fang J, Chacón P, Nogales E. Structure of promoter-bound TFIID and model of human pre-initiation complex assembly. Nature. PMID 27007846 DOI: 10.1038/Nature17394  0.6
2016 López-Blanco JR, Chacón P. New generation of elastic network models. Current Opinion in Structural Biology. 37: 46-53. PMID 26716577 DOI: 10.1016/J.Sbi.2015.11.013  0.6
2016 Aliaga JI, Alonso P, Badía JM, Chacón P, Davidović D, López-Blanco JR, Quintana-Ortí ES. A fast band-Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors Journal of Computational Physics. 309: 314-323. DOI: 10.1016/J.Jcp.2016.01.007  0.6
2015 Artola M, Ruiz-Avila LB, Vergoñós A, Huecas S, Araujo-Bazán L, Martín-Fontecha M, Vázquez-Villa H, Turrado C, Ramírez-Aportela E, Hoegl A, Nodwell M, Barasoain I, Chacón P, Sieber SA, Andreu JM, et al. Effective GTP-replacing FtsZ inhibitors and antibacterial mechanism of action. Acs Chemical Biology. 10: 834-43. PMID 25486266 DOI: 10.1021/Cb500974D  0.4
2015 Ramírez-Aportela E, López-Blanco JR, Andreu JM, Chacon P. Molecular Dynamics and Assembly Switch of FtsZ Filaments Biophysical Journal. 108: 5-7. DOI: 10.1016/J.Bpj.2014.11.2889  0.6
2015 Canosa-Valls AJ, Ramírez-Aportela E, Chacón P, López-Blanco JR. Integrative Modeling Approaches to Interpret High-Resolution cryo-EM Reconstructions Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.2582  0.6
2015 López-Blanco JR, Chacón P. Structural modeling from electron microscopy data Wiley Interdisciplinary Reviews: Computational Molecular Science. 5: 62-81. DOI: 10.1002/Wcms.1199  0.6
2014 Silva-Martín N, Bartual SG, Ramírez-Aportela E, Chacón P, Park CG, Hermoso JA. Structural basis for selective recognition of endogenous and microbial polysaccharides by macrophage receptor SIGN-R1. Structure (London, England : 1993). 22: 1595-606. PMID 25450767 DOI: 10.1016/J.Str.2014.09.001  0.4
2014 Ramírez-Aportela E, López-Blanco JR, Andreu JM, Chacón P. Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations. Biophysical Journal. 107: 2164-76. PMID 25418101 DOI: 10.1016/J.Bpj.2014.09.033  0.6
2014 López-Blanco JR, Aliaga JI, Quintana-Ortí ES, Chacón P. iMODS: internal coordinates normal mode analysis server. Nucleic Acids Research. 42: W271-6. PMID 24771341 DOI: 10.1093/Nar/Gku339  0.6
2014 Krüger DM, Ignacio Garzón J, Chacón P, Gohlke H. DrugScorePPI knowledge-based potentials used as scoring and objective function in protein-protein docking. Plos One. 9: e89466. PMID 24586799 DOI: 10.1371/Journal.Pone.0089466  0.6
2014 López-Blanco JR, Ramirez E, Garcia S, Chacon P. Imods: Fast Exploration of Macromolecular Collective Motions Biophysical Journal. 106. DOI: 10.1016/J.Bpj.2013.11.3614  0.6
2013 Estrin E, Lopez-Blanco JR, Chacón P, Martin A. Formation of an intricate helical bundle dictates the assembly of the 26S proteasome lid. Structure (London, England : 1993). 21: 1624-35. PMID 23911091 DOI: 10.1016/J.Str.2013.06.023  0.6
2013 Ruiz-Avila LB, Huecas S, Artola M, Vergoñós A, Ramírez-Aportela E, Cercenado E, Barasoain I, Vázquez-Villa H, Martín-Fontecha M, Chacón P, López-Rodríguez ML, Andreu JM. Synthetic inhibitors of bacterial cell division targeting the GTP-binding site of FtsZ. Acs Chemical Biology. 8: 2072-83. PMID 23855511 DOI: 10.1021/Cb400208Z  0.4
2013 López-Blanco JR, Reyes R, Aliaga JI, Badia RM, Chacón P, Quintana-Ortí ES. Exploring large macromolecular functional motions on clusters of multicore processors Journal of Computational Physics. 246: 275-288. DOI: 10.1016/J.Jcp.2013.03.032  0.6
2012 Pesonen J, Henriksson KOE, López-Blanco JR, Chacón P. Normal mode analysis of molecular motions in curvilinear coordinates on a non-Eckart body-frame: an application to protein torsion dynamics Journal of Mathematical Chemistry. 50: 1521-1549. DOI: 10.1007/S10910-012-9987-8  0.6
2010 Abia D, Bastolla U, Chacón P, Fábrega C, Gago F, Morreale A, Tramontano A. In memoriam. Angel Ramírez Ortiz (1966-2008). Proteins. 78: iii-viii. PMID 19937956 DOI: 10.1002/Prot.22660  0.6
2009 Boer DR, Ruíz-Masó JA, López-Blanco JR, Blanco AG, Vives-Llàcer M, Chacón P, Usón I, Gomis-Rüth FX, Espinosa M, Llorca O, del Solar G, Coll M. Plasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domains. The Embo Journal. 28: 1666-78. PMID 19440202 DOI: 10.1038/Emboj.2009.125  0.6
2008 Torreira E, Jha S, López-Blanco JR, Arias-Palomo E, Chacón P, Cañas C, Ayora S, Dutta A, Llorca O. Architecture of the pontin/reptin complex, essential in the assembly of several macromolecular complexes. Structure (London, England : 1993). 16: 1511-20. PMID 18940606 DOI: 10.1016/J.Str.2008.08.009  0.6
2004 Kovacs JA, Chacón P, Abagyan R. Predictions of protein flexibility: first-order measures. Proteins. 56: 661-8. PMID 15281119 DOI: 10.1002/Prot.20151  0.6
2004 Wriggers W, Chacón P, Kovacs JA, Tama F, Birmanns S. Topology representing neural networks reconcile biomolecular shape, structure, and dynamics Neurocomputing. 56: 365-379. DOI: 10.1016/J.Neucom.2003.09.007  0.6
2003 Opalka N, Chlenov M, Chacon P, Rice WJ, Wriggers W, Darst SA. Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase. Cell. 114: 335-45. PMID 12914698 DOI: 10.1016/S0092-8674(03)00600-7  0.6
2003 Kovacs JA, Chacón P, Cong Y, Metwally E, Wriggers W. Fast rotational matching of rigid bodies by fast Fourier transform acceleration of five degrees of freedom. Acta Crystallographica. Section D, Biological Crystallography. 59: 1371-6. PMID 12876338 DOI: 10.1107/S0907444903011247  0.6
2003 Chacón P, Tama F, Wriggers W. Mega-Dalton biomolecular motion captured from electron microscopy reconstructions. Journal of Molecular Biology. 326: 485-92. PMID 12559916 DOI: 10.1016/S0022-2836(02)01426-2  0.6
2002 Chacón P, Wriggers W. Multi-resolution contour-based fitting of macromolecular structures. Journal of Molecular Biology. 317: 375-84. PMID 11922671 DOI: 10.1006/Jmbi.2002.5438  0.6
2002 Darst SA, Opalka N, Chacon P, Polyakov A, Richter C, Zhang G, Wriggers W. Conformational flexibility of bacterial RNA polymerase. Proceedings of the National Academy of Sciences of the United States of America. 99: 4296-301. PMID 11904365 DOI: 10.1073/Pnas.052054099  0.6
2001 Wriggers W, Chacón P. Modeling tricks and fitting techniques for multiresolution structures Structure. 9: 779-788. PMID 11566128 DOI: 10.1016/S0969-2126(01)00648-7  0.6
2001 Wriggers W, Chacón P. Using Situs for the registration of protein structures with low-resolution bead models from x-ray solution scattering Journal of Applied Crystallography. 34: 773-776. DOI: 10.1107/S0021889801012869  0.6
1997 Lambeir AM, Díaz Pereira JF, Chacón P, Vermeulen G, Heremans K, Devreese B, Van Beeumen J, De Meester I, Scharpé S. A prediction of DPP IV/CD26 domain structure from a physico-chemical investigation of dipeptidyl peptidase IV (CD26) from human seminal plasma. Biochimica Et Biophysica Acta. 1340: 215-26. PMID 9252108 DOI: 10.1016/S0167-4838(97)00045-9  0.6
1993 Andrade MA, Chacón P, Merelo JJ, Morán F. Evaluation of secondary structure of proteins from uv circular dichroism spectra using an unsupervised learning neural network Protein Engineering, Design and Selection. 6: 383-390. PMID 8332596 DOI: 10.1093/Protein/6.4.383  0.6
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