Robert P. Sebra, Ph.D. - Publications

Affiliations: 
2005 University of Colorado, Boulder, Boulder, CO, United States 

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Poon LL, Song T, Rosenfeld R, Lin X, Rogers MB, Zhou B, Sebra R, Halpin RA, Guan Y, Twaddle A, DePasse JV, Stockwell TB, Wentworth DE, Holmes EC, Greenbaum B, et al. Quantifying influenza virus diversity and transmission in humans. Nature Genetics. PMID 26727660 DOI: 10.1038/ng.3479  1
2015 Pereira E, Camacho-Vanegas O, Anand S, Sebra R, Catalina Camacho S, Garnar-Wortzel L, Nair N, Moshier E, Wooten M, Uzilov A, Chen R, Prasad-Hayes M, Zakashansky K, Beddoe AM, Schadt E, et al. Personalized Circulating Tumor DNA Biomarkers Dynamically Predict Treatment Response and Survival In Gynecologic Cancers. Plos One. 10: e0145754. PMID 26717006 DOI: 10.1371/journal.pone.0145754  1
2015 Akbarian S, Liu C, Knowles JA, Vaccarino FM, Farnham PJ, Crawford GE, Jaffe AE, Pinto D, Dracheva S, Geschwind DH, Mill J, Nairn AC, Abyzov A, Pochareddy S, Prabhakar S, ... ... Sebra R, et al. The PsychENCODE project. Nature Neuroscience. 18: 1707-1712. PMID 26605881 DOI: 10.1038/nn.4156  1
2015 Qiao W, Yang Y, Sebra R, Mendiratta G, Gaedigk A, Desnick RJ, Scott SA. Long-Read Single-Molecule Real-Time (SMRT) Full Gene Sequencing of Cytochrome P450-2D6 (CYP2D6). Human Mutation. PMID 26602992 DOI: 10.1002/humu.22936  1
2015 Tufariello JM, Kerantzas CA, Vilchèze C, Calder RB, Nordberg EK, Fischer JA, Hartman TE, Yang E, Driscoll T, Cole LE, Sebra R, Maqbool SB, Wattam AR, Jacobs WR. The Complete Genome Sequence of the Emerging Pathogen Mycobacterium haemophilum Explains Its Unique Culture Requirements. Mbio. 6. PMID 26578674 DOI: 10.1128/mBio.01313-15  1
2015 Sudmant PH, Rausch T, Gardner EJ, Handsaker RE, Abyzov A, Huddleston J, Zhang Y, Ye K, Jun G, Hsi-Yang Fritz M, Konkel MK, Malhotra A, Stütz AM, Shi X, Paolo Casale F, ... ... Sebra R, et al. An integrated map of structural variation in 2,504 human genomes. Nature. 526: 75-81. PMID 26432246 DOI: 10.1038/nature15394  1
2015 Panesso D, Planet PJ, Diaz L, Hugonnet JE, Tran TT, Narechania A, Munita JM, Rincon S, Carvajal LP, Reyes J, Londoño A, Smith H, Sebra R, Deikus G, Weinstock GM, et al. Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil. Emerging Infectious Diseases. 21: 1844-8. PMID 26402569 DOI: 10.3201/eid2110.141914  1
2015 Pak TR, Altman DR, Attie O, Sebra R, Hamula CL, Lewis M, Deikus G, Newman LC, Fang G, Hand J, Patel G, Wallach F, Schadt EE, Huprikar S, van Bakel H, et al. Whole-genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia. Antimicrobial Agents and Chemotherapy. PMID 26324280 DOI: 10.1128/AAC.01723-15  1
2015 Pendleton M, Sebra R, Pang AW, Ummat A, Franzen O, Rausch T, Stütz AM, Stedman W, Anantharaman T, Hastie A, Dai H, Fritz MH, Cao H, Cohain A, Deikus G, et al. Assembly and diploid architecture of an individual human genome via single-molecule technologies. Nature Methods. PMID 26121404 DOI: 10.1038/nmeth.3454  1
2015 Beaulaurier J, Zhang XS, Zhu S, Sebra R, Rosenbluh C, Deikus G, Shen N, Munera D, Waldor MK, Chess A, Blaser MJ, Schadt EE, Fang G. Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes. Nature Communications. 6: 7438. PMID 26074426 DOI: 10.1038/ncomms8438  1
2015 Planet PJ, Diaz L, Kolokotronis SO, Narechania A, Reyes J, Xing G, Rincon S, Smith H, Panesso D, Ryan C, Smith DP, Guzman M, Zurita J, Sebra R, Deikus G, et al. Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America. The Journal of Infectious Diseases. PMID 26048971 DOI: 10.1093/infdis/jiv320  1
2015 Yang Y, Sebra R, Pullman BS, Qiao W, Peter I, Desnick RJ, Geyer CR, DeCoteau JF, Scott SA. Quantitative and multiplexed DNA methylation analysis using long-read single-molecule real-time bisulfite sequencing (SMRT-BS). Bmc Genomics. 16: 350. PMID 25943404 DOI: 10.1186/s12864-015-1572-7  1
2015 Rogers MB, Song T, Sebra R, Greenbaum BD, Hamelin ME, Fitch A, Twaddle A, Cui L, Holmes EC, Boivin G, Ghedin E. Intrahost dynamics of antiviral resistance in influenza A virus reflect complex patterns of segment linkage, reassortment, and natural selection. Mbio. 6. PMID 25852163 DOI: 10.1128/mBio.02464-14  1
2015 Mathers AJ, Stoesser N, Sheppard AE, Pankhurst L, Giess A, Yeh AJ, Didelot X, Turner SD, Sebra R, Kasarskis A, Peto T, Crook D, Sifri CD. Klebsiella pneumoniae carbapenemase (KPC)-producing K. pneumoniae at a single institution: insights into endemicity from whole-genome sequencing. Antimicrobial Agents and Chemotherapy. 59: 1656-63. PMID 25561339 DOI: 10.1128/AAC.04292-14  1
2014 Stoesser N, Giess A, Batty EM, Sheppard AE, Walker AS, Wilson DJ, Didelot X, Bashir A, Sebra R, Kasarskis A, Sthapit B, Shakya M, Kelly D, Pollard AJ, Peto TE, et al. Genome sequencing of an extended series of NDM-producing Klebsiella pneumoniae isolates from neonatal infections in a Nepali hospital characterizes the extent of community- versus hospital-associated transmission in an endemic setting. Antimicrobial Agents and Chemotherapy. 58: 7347-57. PMID 25267672 DOI: 10.1128/AAC.03900-14  1
2014 Altman DR, Sebra R, Hand J, Attie O, Deikus G, Carpini KW, Patel G, Rana M, Arvelakis A, Grewal P, Dutta J, Rose H, Shopsin B, Daefler S, Schadt E, et al. Transmission of methicillin-resistant Staphylococcus aureus via deceased donor liver transplantation confirmed by whole genome sequencing. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons. 14: 2640-4. PMID 25250641 DOI: 10.1111/ajt.12897  1
2014 Chen X, Bracht JR, Goldman AD, Dolzhenko E, Clay DM, Swart EC, Perlman DH, Doak TG, Stuart A, Amemiya CT, Sebra RP, Landweber LF. The architecture of a scrambled genome reveals massive levels of genomic rearrangement during development. Cell. 158: 1187-98. PMID 25171416 DOI: 10.1016/j.cell.2014.07.034  1
2014 Benson MA, Ohneck EA, Ryan C, Alonzo F, Smith H, Narechania A, Kolokotronis SO, Satola SW, Uhlemann AC, Sebra R, Deikus G, Shopsin B, Planet PJ, Torres VJ. Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element. Molecular Microbiology. 93: 664-81. PMID 24962815 DOI: 10.1111/mmi.12682  1
2014 Brinzevich D, Young GR, Sebra R, Ayllon J, Maio SM, Deikus G, Chen BK, Fernandez-Sesma A, Simon V, Mulder LC. HIV-1 interacts with human endogenous retrovirus K (HML-2) envelopes derived from human primary lymphocytes. Journal of Virology. 88: 6213-23. PMID 24648457 DOI: 10.1128/JVI.00669-14  1
2013 Melters DP, Bradnam KR, Young HA, Telis N, May MR, Ruby JG, Sebra R, Peluso P, Eid J, Rank D, Garcia JF, DeRisi JL, Smith T, Tobias C, Ross-Ibarra J, et al. Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution. Genome Biology. 14: R10. PMID 23363705 DOI: 10.1186/gb-2013-14-1-r10  1
2012 Bashir A, Klammer AA, Robins WP, Chin CS, Webster D, Paxinos E, Hsu D, Ashby M, Wang S, Peluso P, Sebra R, Sorenson J, Bullard J, Yen J, Valdovino M, et al. A hybrid approach for the automated finishing of bacterial genomes. Nature Biotechnology. 30: 701-7. PMID 22750883 DOI: 10.1038/nbt.2288  1
2011 Rasko DA, Webster DR, Sahl JW, Bashir A, Boisen N, Scheutz F, Paxinos EE, Sebra R, Chin CS, Iliopoulos D, Klammer A, Peluso P, Lee L, Kislyuk AO, Bullard J, et al. Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany. The New England Journal of Medicine. 365: 709-17. PMID 21793740 DOI: 10.1056/NEJMoa1106920  1
2009 Eid J, Fehr A, Gray J, Luong K, Lyle J, Otto G, Peluso P, Rank D, Baybayan P, Bettman B, Bibillo A, Bjornson K, Chaudhuri B, Christians F, Cicero R, ... ... Sebra R, et al. Real-time DNA sequencing from single polymerase molecules. Science (New York, N.Y.). 323: 133-8. PMID 19023044 DOI: 10.1126/science.1162986  1
2008 Watts MPC, Cramer N, Sebra R, Simms H, Masters K, Haraldsson T, Anseth K, Bowman C. Advances in the fabrication of surface modified micro-fluidic devices in non - Fluorescing UV cured materials Proceedings of Spie - the International Society For Optical Engineering. 6882. DOI: 10.1117/12.758755  1
2007 Sebra RP, Reddy SK, Masters KS, Bowman CN, Anseth KS. Controlled polymerization chemistry to graft architectures that influence cell-material interactions. Acta Biomaterialia. 3: 151-61. PMID 17236829 DOI: 10.1016/j.actbio.2006.07.010  1
2006 Sebra RP, Masters KS, Cheung CY, Bowman CN, Anseth KS. Detection of antigens in biologically complex fluids with photografted whole antibodies. Analytical Chemistry. 78: 3144-51. PMID 16643006 DOI: 10.1021/ac052246y  1
2006 Sebra RP, Kasko AM, Anseth KS, Bowman CN. Synthesis and photografting of highly pH-responsive polymer chains Sensors and Actuators, B: Chemical. 119: 127-134. DOI: 10.1016/j.snb.2005.11.066  1
2006 Haraldsson KT, Hutchison JB, Sebra RP, Good BT, Anseth KS, Bowman CN. 3D polymeric microfluidic device fabrication via contact liquid photolithographic polymerization (CLiPP) Sensors and Actuators, B: Chemical. 113: 454-460. DOI: 10.1016/j.snb.2005.03.096  1
2006 Sebra RP, Anseth KS, Bowman CN. Integrated surface modification of fully polymeric microfluidic devices using living radical photopolymerization chemistry Journal of Polymer Science, Part a: Polymer Chemistry. 44: 1404-1413. DOI: 10.1002/pola.21247  1
2005 Sebra RP, Masters KS, Bowman CN, Anseth KS. Surface grafted antibodies: controlled architecture permits enhanced antigen detection. Langmuir : the Acs Journal of Surfaces and Colloids. 21: 10907-11. PMID 16285751 DOI: 10.1021/la052101m  1
2005 Reddy SK, Sebra RP, Anseth KS, Bowman CN. Living radical photopolymerization induced grafting on thiol-ene based substrates Journal of Polymer Science, Part a: Polymer Chemistry. 43: 2134-2144. DOI: 10.1002/pola.20693  1
2004 Hutchison JB, Haraldsson KT, Good BT, Sebra RP, Luo N, Anseth KS, Bowman CN. Robust polymer microfluidic device fabrication via contact liquid photolithographic polymerization (CLiPP). Lab On a Chip. 4: 658-62. PMID 15570381 DOI: 10.1039/b405985a  1
2004 Sebra RP, Masters KS, Bowman CN, Anseth KS. A rapid antigen detection assay using photografted whole antibodies Aiche Annual Meeting, Conference Proceedings. 2211-2213.  1
2004 Sebra RP, Masters KS, Bowman CN, Anseth KS. Synthesis of antimers for photografting on polymeric surfaces using living radical photopolymerization techniques Transactions - 7th World Biomaterials Congress. 500.  1
2002 Shenoy S, Woerdeman D, Sebra R, Garach-Domech A, Wynne KJ. Quantifying polymer swelling employing a linear variable differential transformer: CO2 effects on SBS triblock copolymer Macromolecular Rapid Communications. 23: 1130-1133. DOI: 10.1002/marc.200290007  1
2002 Sebra RP, Haraldsson KT, Luo N, Hutchison JB, Anseth KS, Bowman CN. 3D-Microfluidic devices using liquid polymer precursors American Chemical Society, Polymer Preprints, Division of Polymer Chemistry. 43: 132-133.  1
2002 Wynne KJ, Shenoy S, Fujiwara T, Irie S, Woerdeman D, Sebra R, Garach A, McHugh M. Supercritical and liquid CO2: Polymer swelling and effects on melting behavior American Chemical Society, Polymer Preprints, Division of Polymer Chemistry. 43: 888.  1
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