| Year |
Citation |
Score |
| 2019 |
Pedersen BP, Stokes DL, Apell HJ. The KdpFABC complex - K transport against all odds. Molecular Membrane Biology. 1-34. PMID 31259644 DOI: 10.1080/09687688.2019.1638977 |
0.306 |
|
| 2018 |
Beilin C, Choudhuri K, Bouma G, Malinova D, Llodra J, Stokes DL, Shimaoka M, Springer TA, Dustin ML, Thrasher AJ, Burns SO. Dendritic cell-expressed common gamma-chain recruits IL-15 for trans-presentation at the murine immunological synapse. Wellcome Open Research. 3: 84. PMID 30483599 DOI: 10.12688/wellcomeopenres.14493.2 |
0.718 |
|
| 2016 |
Coudray N, Lasala R, Zhang Z, Clark KM, Dumont ME, Stokes DL. Deducing the Symmetry of Helical Assemblies: Applications to Membrane Proteins. Journal of Structural Biology. PMID 27255388 DOI: 10.1016/J.Jsb.2016.05.011 |
0.351 |
|
| 2016 |
Coudray N, Zhang Z, Clark KM, Ubarretxena I, Beckstein O, Dumont ME, Stokes DL. Structure of the Borate Transporter Bor1p by cryo-EM Biophysical Journal. 110: 137a-138a. DOI: 10.1016/J.Bpj.2015.11.785 |
0.35 |
|
| 2015 |
Lasala R, Coudray N, Abdine A, Zhang Z, Lopez-Redondo M, Kirshenbaum R, Alexopoulos J, Zolnai Z, Stokes DL, Ubarretxena-Belandia I. Sparse and incomplete factorial matrices to screen membrane protein 2D crystallization. Journal of Structural Biology. 189: 123-34. PMID 25478971 DOI: 10.1016/J.Jsb.2014.11.008 |
0.338 |
|
| 2014 |
Choudhuri K, Llodrá J, Roth EW, Tsai J, Gordo S, Wucherpfennig KW, Kam LC, Stokes DL, Dustin ML. Polarized release of T-cell-receptor-enriched microvesicles at the immunological synapse. Nature. 507: 118-23. PMID 24487619 DOI: 10.1038/Nature12951 |
0.728 |
|
| 2014 |
Glaves J, Gorski P, Trieber C, Stokes D, Young H. Two dimensional crystallization of calcium transport regulatory complexes Acta Crystallographica Section a Foundations and Advances. 70: C1066-C1066. DOI: 10.1107/S2053273314089335 |
0.377 |
|
| 2014 |
Coudray N, Lasala R, Zhang Z, Zolnai Z, Ubarretxena I, Stokes D. Two-dimensional crystallization of membrane proteins: Screening strategies Microscopy and Microanalysis. 20: 1210-1211. DOI: 10.1017/S1431927614007788 |
0.343 |
|
| 2013 |
Choi WS, Rice WJ, Stokes DL, Coller BS. Three-dimensional reconstruction of intact human integrin αIIbβ3: new implications for activation-dependent ligand binding. Blood. 122: 4165-71. PMID 24136164 DOI: 10.1182/Blood-2013-04-499194 |
0.316 |
|
| 2013 |
Sampathkumar P, Kim SJ, Upla P, Rice WJ, Phillips J, Timney BL, Pieper U, Bonanno JB, Fernandez-Martinez J, Hakhverdyan Z, Ketaren NE, Matsui T, Weiss TM, Stokes DL, Sauder JM, et al. Structure, dynamics, evolution, and function of a major scaffold component in the nuclear pore complex. Structure (London, England : 1993). 21: 560-71. PMID 23499021 DOI: 10.1016/J.Str.2013.02.005 |
0.337 |
|
| 2013 |
Stokes DL, Ubarretxena-Belandia I, Gonen T, Engel A. High-throughput methods for electron crystallography. Methods in Molecular Biology (Clifton, N.J.). 955: 273-96. PMID 23132066 DOI: 10.1007/978-1-62703-176-9_15 |
0.352 |
|
| 2013 |
Allen GS, Stokes DL. Modeling, docking, and fitting of atomic structures to 3D maps from cryo-electron microscopy. Methods in Molecular Biology (Clifton, N.J.). 955: 229-41. PMID 23132064 DOI: 10.1007/978-1-62703-176-9_13 |
0.337 |
|
| 2012 |
Ubarretxena-Belandia I, Stokes DL. Membrane protein structure determination by electron crystallography. Current Opinion in Structural Biology. 22: 520-8. PMID 22572457 DOI: 10.1016/J.Sbi.2012.04.003 |
0.359 |
|
| 2012 |
Fernandez-Martinez J, Phillips J, Sekedat MD, Diaz-Avalos R, Velazquez-Muriel J, Franke JD, Williams R, Stokes DL, Chait BT, Sali A, Rout MP. Structure-function mapping of a heptameric module in the nuclear pore complex. The Journal of Cell Biology. 196: 419-34. PMID 22331846 DOI: 10.1083/Jcb.201109008 |
0.322 |
|
| 2012 |
Choi W, Rice WJ, Negri A, Filizola M, Stokes DL, Coller BS. Three-Dimensional Reconstruction of Intact Human Integrin αIIbβ3 in a Phospholipid Bilayer Nanodisc Blood. 120: 92-92. DOI: 10.1182/Blood.V120.21.92.92 |
0.349 |
|
| 2011 |
Nans A, Mohandas N, Stokes DL. Native ultrastructure of the red cell cytoskeleton by cryo-electron tomography. Biophysical Journal. 101: 2341-50. PMID 22098732 DOI: 10.1016/J.Bpj.2011.09.050 |
0.683 |
|
| 2011 |
Allen GS, Wu CC, Cardozo T, Stokes DL. The architecture of CopA from Archeaoglobus fulgidus studied by cryo-electron microscopy and computational docking. Structure (London, England : 1993). 19: 1219-32. PMID 21820315 DOI: 10.1016/J.Str.2011.05.014 |
0.385 |
|
| 2011 |
Leo-Macias A, Katz G, Wei H, Alimova A, Katz A, Rice WJ, Diaz-Avalos R, Hu GB, Stokes DL, Gottlieb P. Toroidal surface complexes of bacteriophage ϕ12 are responsible for host-cell attachment. Virology. 414: 103-9. PMID 21489589 DOI: 10.1016/J.Virol.2011.03.020 |
0.312 |
|
| 2011 |
Nans A, Einheber S, Salzer JL, Stokes DL. Electron tomography of paranodal septate-like junctions and the associated axonal and glial cytoskeletons in the central nervous system. Journal of Neuroscience Research. 89: 310-9. PMID 21259318 DOI: 10.1002/Jnr.22561 |
0.67 |
|
| 2011 |
Glaves JP, Trieber CA, Ceholski DK, Stokes DL, Young HS. Phosphorylation and mutation of phospholamban alter physical interactions with the sarcoplasmic reticulum calcium pump. Journal of Molecular Biology. 405: 707-23. PMID 21108950 DOI: 10.1016/J.Jmb.2010.11.014 |
0.336 |
|
| 2011 |
Glaves JP, Trieber CA, Ceholski DK, Stokes DL, Young HS. Phosphorylation and Mutation Induce an Order-To-Disorder Transition in the Cytoplasmic Domain of Phospholamban Biophysical Journal. 100: 343a-344a. DOI: 10.1016/J.Bpj.2010.12.2078 |
0.329 |
|
| 2010 |
Ubarretxena-Belandia I, Stokes DL. Present and future of membrane protein structure determination by electron crystallography. Advances in Protein Chemistry and Structural Biology. 81: 33-60. PMID 21115172 DOI: 10.1016/B978-0-12-381357-2.00002-5 |
0.358 |
|
| 2010 |
Diaz R, Rice WJ, Stokes DL. Fourier-Bessel reconstruction of helical assemblies. Methods in Enzymology. 482: 131-65. PMID 20888960 DOI: 10.1016/S0076-6879(10)82005-1 |
0.371 |
|
| 2010 |
Owen GR, Stokes DL. Exploring the Nature of Desmosomal Cadherin Associations in 3D. Dermatology Research and Practice. 2010: 930401. PMID 20672011 DOI: 10.1155/2010/930401 |
0.337 |
|
| 2010 |
Stokes DL, Rice WJ, Hu M, Kim C, Ubarretxena-Belandia I. Two-dimensional crystallization of integral membrane proteins for electron crystallography. Methods in Molecular Biology (Clifton, N.J.). 654: 187-205. PMID 20665267 DOI: 10.1007/978-1-60761-762-4_10 |
0.368 |
|
| 2010 |
Tucker JD, Siebert CA, Escalante M, Adams PG, Olsen JD, Otto C, Stokes DL, Hunter CN. Membrane invagination in Rhodobacter sphaeroides is initiated at curved regions of the cytoplasmic membrane, then forms both budded and fully detached spherical vesicles. Molecular Microbiology. 76: 833-47. PMID 20444085 DOI: 10.1111/J.1365-2958.2010.07153.X |
0.323 |
|
| 2010 |
Kim C, Vink M, Hu M, Love J, Stokes DL, Ubarretxena-Belandia I. An automated pipeline to screen membrane protein 2D crystallization. Journal of Structural and Functional Genomics. 11: 155-66. PMID 20349145 DOI: 10.1007/S10969-010-9088-5 |
0.336 |
|
| 2010 |
Hu M, Vink M, Kim C, Derr K, Koss J, D'Amico K, Cheng A, Pulokas J, Ubarretxena-Belandia I, Stokes D. Automated electron microscopy for evaluating two-dimensional crystallization of membrane proteins. Journal of Structural Biology. 171: 102-10. PMID 20197095 DOI: 10.1016/J.Jsb.2010.02.018 |
0.333 |
|
| 2010 |
Wu C, Allen GS, Stokes DL. Structure of CopA from Archaeoglobus Fulgidus by Cryoelectron Microscopy Biophysical Journal. 98: 168a. DOI: 10.1016/J.Bpj.2009.12.907 |
0.328 |
|
| 2010 |
Glaves JPJ, Trieber CA, Stokes DL, Young HS. A Functional, Pentameric Form of Phospholamban Is Required For Two-Dimensional Crystallization With the Sarcoplasmic Reticulum Calcium Pump Biophysical Journal. 98: 47a. DOI: 10.1016/J.Bpj.2009.12.269 |
0.351 |
|
| 2009 |
Hu G, Stokes D. New Insight Into Desmosome Structure By Whole Cell Cryo-electron Tomography Biophysical Journal. 96: 412a-413a. DOI: 10.1016/J.Bpj.2008.12.2104 |
0.337 |
|
| 2009 |
Stokes DL, Wu C. Cryoelectron Microscopy of an ATP-dependent Cu pump from Archaeoglobus fulgidis Biophysical Journal. 96: 210a. DOI: 10.1016/J.Bpj.2008.12.1863 |
0.343 |
|
| 2008 |
Milstein O, Tseng SY, Starr T, Llodra J, Nans A, Liu M, Wild MK, van der Merwe PA, Stokes DL, Reisner Y, Dustin ML. Nanoscale increases in CD2-CD48-mediated intermembrane spacing decrease adhesion and reorganize the immunological synapse. The Journal of Biological Chemistry. 283: 34414-22. PMID 18826951 DOI: 10.1074/Jbc.M804756200 |
0.679 |
|
| 2008 |
Acehan D, Petzold C, Gumper I, Sabatini DD, Müller EJ, Cowin P, Stokes DL. Plakoglobin is required for effective intermediate filament anchorage to desmosomes. The Journal of Investigative Dermatology. 128: 2665-75. PMID 18496566 DOI: 10.1038/Jid.2008.141 |
0.306 |
|
| 2008 |
Owen GR, Acehan D, Derr KD, Rice WJ, Stokes DL. Cryoelectron tomography of isolated desmosomes. Biochemical Society Transactions. 36: 173-9. PMID 18363558 DOI: 10.1042/Bst0360173 |
0.322 |
|
| 2008 |
Hu GB, Wei H, Rice WJ, Stokes DL, Gottlieb P. Electron cryo-tomographic structure of cystovirus phi 12. Virology. 372: 1-9. PMID 18022662 DOI: 10.1016/J.Virol.2007.10.013 |
0.312 |
|
| 2008 |
Hu GB, Rice WJ, Dröse S, Altendorf K, Stokes DL. Three-dimensional structure of the KdpFABC complex of Escherichia coli by electron tomography of two-dimensional crystals. Journal of Structural Biology. 161: 411-8. PMID 17945510 DOI: 10.1016/J.Jsb.2007.09.006 |
0.391 |
|
| 2007 |
Vink M, Derr K, Love J, Stokes DL, Ubarretxena-Belandia I. A high-throughput strategy to screen 2D crystallization trials of membrane proteins. Journal of Structural Biology. 160: 295-304. PMID 17951070 DOI: 10.1016/J.Jsb.2007.09.003 |
0.342 |
|
| 2007 |
Stokes DL. Desmosomes from a structural perspective. Current Opinion in Cell Biology. 19: 565-71. PMID 17945476 DOI: 10.1016/J.Ceb.2007.09.003 |
0.316 |
|
| 2007 |
Pomfret AJ, Rice WJ, Stokes DL. Application of the iterative helical real-space reconstruction method to large membranous tubular crystals of P-type ATPases. Journal of Structural Biology. 157: 106-16. PMID 16879984 DOI: 10.1016/J.Jsb.2006.05.012 |
0.742 |
|
| 2006 |
Chen Z, Akin BL, Stokes DL, Jones LR. Cross-linking of C-terminal residues of phospholamban to the Ca2+ pump of cardiac sarcoplasmic reticulum to probe spatial and functional interactions within the transmembrane domain. The Journal of Biological Chemistry. 281: 14163-72. PMID 16554295 DOI: 10.1074/Jbc.M601338200 |
0.319 |
|
| 2006 |
Stokes DL, Pomfret AJ, Rice WJ, Glaves JP, Young HS. Interactions between Ca2+-ATPase and the pentameric form of phospholamban in two-dimensional co-crystals. Biophysical Journal. 90: 4213-23. PMID 16533842 DOI: 10.1529/Biophysj.105.079640 |
0.748 |
|
| 2005 |
Stokes DL, Delavoie F, Rice WJ, Champeil P, McIntosh DB, Lacapère JJ. Structural studies of a stabilized phosphoenzyme intermediate of Ca2+-ATPase. The Journal of Biological Chemistry. 280: 18063-72. PMID 15734741 DOI: 10.1074/Jbc.M500031200 |
0.36 |
|
| 2005 |
Chen Z, Stokes DL, Jones LR. Role of leucine 31 of phospholamban in structural and functional interactions with the Ca2+ pump of cardiac sarcoplasmic reticulum. The Journal of Biological Chemistry. 280: 10530-9. PMID 15644311 DOI: 10.1074/Jbc.M414007200 |
0.33 |
|
| 2005 |
Hinsen K, Reuter N, Navaza J, Stokes DL, Lacapère JJ. Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase. Biophysical Journal. 88: 818-27. PMID 15542555 DOI: 10.1529/Biophysj.104.050716 |
0.338 |
|
| 2004 |
Young HS, Stokes DL. The mechanics of calcium transport. The Journal of Membrane Biology. 198: 55-63. PMID 15138745 DOI: 10.1007/S00232-004-0666-Y |
0.335 |
|
| 2004 |
Ryan C, Stokes DL, Chen M, Zhang Z, Hardwicke PM. Effect of orthophosphate, nucleotide analogues, ADP, and phosphorylation on the cytoplasmic domains of Ca(2+)-ATPase from scallop sarcoplasmic reticulum. The Journal of Biological Chemistry. 279: 5380-6. PMID 14645252 DOI: 10.1074/Jbc.M310085200 |
0.325 |
|
| 2003 |
He W, Cowin P, Stokes DL. Untangling desmosomal knots with electron tomography. Science (New York, N.Y.). 302: 109-13. PMID 14526082 DOI: 10.1126/Science.1086957 |
0.331 |
|
| 2003 |
Chen Z, Stokes DL, Rice WJ, Jones LR. Spatial and dynamic interactions between phospholamban and the canine cardiac Ca2+ pump revealed with use of heterobifunctional cross-linking agents. The Journal of Biological Chemistry. 278: 48348-56. PMID 12972413 DOI: 10.1074/Jbc.M309545200 |
0.308 |
|
| 2003 |
Stokes DL, Green NM. Structure and function of the calcium pump. Annual Review of Biophysics and Biomolecular Structure. 32: 445-68. PMID 12598367 DOI: 10.1146/Annurev.Biophys.32.110601.142433 |
0.344 |
|
| 2002 |
Xu C, Rice WJ, He W, Stokes DL. A structural model for the catalytic cycle of Ca(2+)-ATPase. Journal of Molecular Biology. 316: 201-11. PMID 11829513 DOI: 10.1006/Jmbi.2001.5330 |
0.348 |
|
| 2001 |
Young HS, Jones LR, Stokes DL. Locating phospholamban in co-crystals with Ca(2+)-ATPase by cryoelectron microscopy. Biophysical Journal. 81: 884-94. PMID 11463632 DOI: 10.1016/S0006-3495(01)75748-7 |
0.373 |
|
| 2001 |
Young HS, Xu C, Zhang P, Stokes DL. Locating the thapsigargin-binding site on Ca(2+)-ATPase by cryoelectron microscopy. Journal of Molecular Biology. 308: 231-40. PMID 11327764 DOI: 10.1006/Jmbi.2001.4558 |
0.353 |
|
| 2001 |
Rice WJ, Young HS, Martin DW, Sachs JR, Stokes DL. Structure of Na+,K+-ATPase at 11-A resolution: comparison with Ca2+-ATPase in E1 and E2 states. Biophysical Journal. 80: 2187-97. PMID 11325721 DOI: 10.1016/S0006-3495(01)76191-7 |
0.38 |
|
| 2000 |
Stokes DL, Wagenknecht T. Calcium transport across the sarcoplasmic reticulum structure and function of Ca2+-ATPase and the ryanodine receptor European Journal of Biochemistry. 267: 5274-5279. PMID 10951184 DOI: 10.1046/J.1432-1327.2000.01569.X |
0.371 |
|
| 2000 |
Stokes DL, Green NM. Modeling a dehalogenase fold into the 8-Å density map for Ca2+-ATPase defines a new domain structure Biophysical Journal. 78: 1765-1776. PMID 10733958 DOI: 10.1016/S0006-3495(00)76727-0 |
0.36 |
|
| 1999 |
Stokes DL, Auer M, Zhang P, Kühlbrandt W. Comparison of H+-ATPase and Ca2+-ATPase suggests that a large conformational change initiates P-type ion pump reaction cycles. Current Biology : Cb. 9: 672-9. PMID 10395538 DOI: 10.1016/S0960-9822(99)80307-8 |
0.342 |
|
| 1999 |
DeRosier D, Stokes DL, Darst SA. Averaging data derived from images of helical structures with different symmetries. Journal of Molecular Biology. 289: 159-65. PMID 10339413 DOI: 10.1006/Jmbi.1999.2677 |
0.327 |
|
| 1998 |
Young HS, Reddy LG, Jones LR, Stokes DL. Co-reconstitution and co-crystallization of phospholamban and Ca(2+)-ATPase. Annals of the New York Academy of Sciences. 853: 103-15. PMID 10603940 DOI: 10.1111/J.1749-6632.1998.Tb08260.X |
0.405 |
|
| 1998 |
Shi D, Lewis MR, Young HS, Stokes DL. Three-dimensional crystals of Ca2+-ATPase from sarcoplasmic reticulum: merging electron diffraction tilt series and imaging the (h, k, 0) projection. Journal of Molecular Biology. 284: 1547-64. PMID 9878370 DOI: 10.1006/Jmbi.1998.2283 |
0.392 |
|
| 1998 |
Lacapère JJ, Stokes DL, Olofsson A, Rigaud JL. Two-dimensional crystallization of Ca-ATPase by detergent removal. Biophysical Journal. 75: 1319-29. PMID 9726933 DOI: 10.1016/S0006-3495(98)74050-0 |
0.403 |
|
| 1998 |
Ogawa H, Stokes DL, Sasabe H, Toyoshima C. Structure of the Ca2+ pump of sarcoplasmic reticulum: a view along the lipid bilayer at 9-A resolution. Biophysical Journal. 75: 41-52. PMID 9649366 DOI: 10.1016/S0006-3495(98)77493-4 |
0.372 |
|
| 1998 |
Zhang P, Toyoshima C, Yonekura K, Green NM, Stokes DL. Structure of the calcium pump from sarcoplasmic reticulum at 8-A resolution Nature. 392: 835-839. PMID 9572145 DOI: 10.1038/33959 |
0.356 |
|
| 1998 |
Lacapère JJ, Stokes DL, Mosser G, Ranck JL, Leblanc G, Rigaud JL. Two-dimensional crystal formation from solubilized membrane proteins using Bio-Beads to remove detergent. Annals of the New York Academy of Sciences. 834: 9-18. PMID 9432924 DOI: 10.1111/J.1749-6632.1997.Tb52221.X |
0.331 |
|
| 1997 |
Stokes DL. Keeping calcium in its place: Ca(2+)-ATPase and phospholamban. Current Opinion in Structural Biology. 7: 550-6. PMID 9266178 DOI: 10.1016/S0959-440X(97)80121-2 |
0.35 |
|
| 1997 |
Young HS, Rigaud JL, Lacapère JJ, Reddy LG, Stokes DL. How to make tubular crystals by reconstitution of detergent-solubilized Ca2(+)-ATPase. Biophysical Journal. 72: 2545-58. PMID 9168030 DOI: 10.1016/S0006-3495(97)78898-2 |
0.38 |
|
| 1996 |
Cheong GW, Young HS, Ogawa H, Toyoshima C, Stokes DL. Lamellar stacking in three-dimensional crystals of Ca2+-ATPase from sarcoplasmic reticulum Biophysical Journal. 70: 1689-1699. PMID 8785327 DOI: 10.1016/S0006-3495(96)79731-X |
0.381 |
|
| 1995 |
Shi D, Hsiung HH, Pace RC, Stokes DL. Preparation and analysis of large, flat crystals of Ca2+-ATPase for electron crystallography Biophysical Journal. 68: 1152-1162. PMID 7756535 DOI: 10.1016/S0006-3495(95)80291-2 |
0.368 |
|
| 1995 |
Reddy LG, Jones LR, Cala SE, O'Brian JJ, Tatulian SA, Stokes DL. Functional reconstitution of recombinant phospholamban with rabbit skeletal Ca(2+)-ATPase. The Journal of Biological Chemistry. 270: 9390-7. PMID 7721863 DOI: 10.1074/Jbc.270.16.9390 |
0.343 |
|
| 1995 |
Tatulian SA, Jones LR, Reddy LG, Stokes DL, Tamm LK. Secondary structure and orientation of phospholamban reconstituted in supported bilayers from polarized attenuated total reflection FTIR spectroscopy. Biochemistry. 34: 4448-56. PMID 7703259 DOI: 10.1021/Bi00013A038 |
0.324 |
|
| 1994 |
Stokes DL, Taylor WR, Green NM. Structure, transmembrane topology and helix packing of P-type ion pumps Febs Letters. 346: 32-38. PMID 8206155 DOI: 10.1016/0014-5793(94)00297-5 |
0.357 |
|
| 1994 |
Stokes DL, Nakamoto RK. Structures of P-type and F-type ion pumps Current Opinion in Structural Biology. 4: 197-203. DOI: 10.1016/S0959-440X(94)90308-5 |
0.31 |
|
| 1993 |
Toyoshima C, Sasabe H, Stokes DL. Three-dimensional cryo-electron microscopy of the calcium ion pump in the sarcoplasmic reticulum membrane. Nature. 362: 467-71. PMID 8385269 DOI: 10.1038/362469A0 |
0.381 |
|
| 1991 |
Stokes DL. P-type ion pumps: structure determination may soon catch up with structure predictions Current Opinion in Structural Biology. 1: 555-561. DOI: 10.1016/S0959-440X(05)80077-6 |
0.312 |
|
| 1990 |
Stokes DL, Green NM. Three-dimensional crystals of CaATPase from sarcoplasmic reticulum. Symmetry and molecular packing Biophysical Journal. 57: 1-14. PMID 2137017 DOI: 10.1016/S0006-3495(90)82501-7 |
0.339 |
|
| Show low-probability matches. |