Brian D. Strahl - Publications

Affiliations: 
Biochemistry and Biophysics UNC School of Medicine 
Website:
https://unclineberger.org/directory/brian-d.-strahl/

134 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Li TM, Coan JP, Krajewski K, Zhang L, Elias JE, Strahl BD, Gozani O, Chua KF. Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules. Scientific Reports. 9: 14226. PMID 31578417 DOI: 10.1038/s41598-019-50817-6  1
2019 Zhang Y, Jang Y, Lee JE, Ahn J, Xu L, Holden MR, Cornett EM, Krajewski K, Klein BJ, Wang SP, Dou Y, Roeder RG, Strahl BD, Rothbart SB, Shi X, et al. Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF. Nature Communications. 10: 2314. PMID 31127101 DOI: 10.1038/s41467-019-10324-8  1
2019 Armstrong RL, Penke TJR, Chao SK, Gentile GM, Strahl BD, Matera AG, McKay DJ, Duronio RJ. H3K9 Promotes Under-Replication of Pericentromeric Heterochromatin in Drosophila Salivary Gland Polytene Chromosomes. Genes. 10. PMID 30700014 DOI: 10.3390/genes10020093  1
2019 Leatham-Jensen M, Uyehara CM, Strahl BD, Matera AG, Duronio RJ, McKay DJ. Lysine 27 of replication-independent histone H3.3 is required for Polycomb target gene silencing but not for gene activation. Plos Genetics. 15: e1007932. PMID 30699116 DOI: 10.1371/journal.pgen.1007932  1
2018 Dronamraju R, Kerschner JL, Peck SA, Hepperla AJ, Adams AT, Hughes KD, Aslam S, Yoblinski AR, Davis IJ, Mosley AL, Strahl BD. Casein Kinase II Phosphorylation of Spt6 Enforces Transcriptional Fidelity by Maintaining Spn1-Spt6 Interaction. Cell Reports. 25: 3476-3489.e5. PMID 30566871 DOI: 10.1016/j.celrep.2018.11.089  1
2018 Suh JL, Watts B, Stuckey JI, Norris-Drouin JL, Cholensky SH, Dickson BM, An Y, Mathea S, Salah E, Knapp S, Khan A, Adams AT, Strahl BD, Sagum CA, Bedford MT, et al. Correction to "Quantitative Characterization of Bivalent Probes for a Dual Bromodomain Protein, Transcription Initiation Factor TFIID subunit 1". Biochemistry. PMID 30485080 DOI: 10.1021/acs.biochem.8b01187  1
2018 Lerner A, Yumerefendi H, Goudy O, Strahl BD, Kuhlman B. Engineering Improved Photoswitches for the Control of Nucleocytoplasmic Distribution. Acs Synthetic Biology. PMID 30441907 DOI: 10.1021/acssynbio.8b00368  1
2018 Klein BJ, Vann KR, Andrews FH, Wang WW, Zhang J, Zhang Y, Beloglazkina AA, Mi W, Li Y, Li H, Shi X, Kutateladze AG, Strahl BD, Liu WR, Kutateladze TG. Structural insights into the π-π-π stacking mechanism and DNA-binding activity of the YEATS domain. Nature Communications. 9: 4574. PMID 30385749 DOI: 10.1038/s41467-018-07072-6  1
2018 Armstrong RL, Penke TJR, Strahl BD, Matera AG, McKay DJ, MacAlpine DM, Duronio RJ. Chromatin conformation and transcriptional activity are permissive regulators of DNA replication initiation in Drosophila. Genome Research. PMID 30279224 DOI: 10.1101/gr.239913.118  1
2018 Klein BJ, Krajewski K, Restrepo S, Lewis PW, Strahl BD, Kutateladze TG. Recognition of cancer mutations in histone H3K36 by epigenetic writers and readers. Epigenetics. PMID 30045670 DOI: 10.1080/15592294.2018.1503491  1
2018 Slaughter MJ, Shanle EK, McFadden AW, Hollis ES, Suttle LE, Strahl BD, Davis IJ. Polybromo-1 (PBRM1) bromodomains variably influence nucleosome interactions and cellular function. The Journal of Biological Chemistry. PMID 29986887 DOI: 10.1074/jbc.RA118.003381  1
2018 Dronamraju R, Hepperla AJ, Shibata Y, Adams AT, Magnuson T, Davis IJ, Strahl BD. Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription. Molecular Cell. 70: 1054-1066.e4. PMID 29932900 DOI: 10.1016/j.molcel.2018.05.020  1
2018 Chiang YC, Park IY, Terzo EA, Tripathi DN, Mason FM, Fahey CC, Karki M, Shuster CB, Sohn BH, Chowdhury P, Powell RT, Ohi R, Tsai YH, de Cubas AA, Khan A, ... ... Strahl BD, et al. SETD2 Haploinsufficiency for Microtubule Methylation is an Early Driver of Genomic Instability in Renal Cell Carcinoma. Cancer Research. PMID 29724720 DOI: 10.1158/0008-5472.CAN-17-3460  1
2018 Suh JL, Watts B, Stuckey JI, Norris-Drouin JL, Cholensky SH, Dickson BM, An Y, Mathea S, Salah E, Knapp S, Khan A, Adams AT, Strahl BD, Sagum CA, Bedford MT, et al. Quantitative characterization of bivalent probes for a dual bromodomain protein, Transcription Initiation Factor TFIID subunit 1, TAF1. Biochemistry. PMID 29558110 DOI: 10.1021/acs.biochem.8b00150  1
2018 Meers MP, Adelman K, Duronio RJ, Strahl BD, McKay DJ, Matera AG. Transcription start site profiling uncovers divergent transcription and enhancer-associated RNAs in Drosophila melanogaster. Bmc Genomics. 19: 157. PMID 29466941 DOI: 10.1186/s12864-018-4510-7  1
2017 Dronamraju R, Jha DK, Eser U, Adams AT, Dominguez D, Choudhury R, Chiang YC, Rathmell WK, Emanuele MJ, Churchman LS, Strahl BD. Set2 methyltransferase facilitates cell cycle progression by maintaining transcriptional fidelity. Nucleic Acids Research. PMID 29294086 DOI: 10.1093/nar/gkx1276  1
2017 Veland N, Hardikar S, Zhong Y, Gayatri S, Dan J, Strahl BD, Rothbart SB, Bedford MT, Chen T. The Arginine Methyltransferase PRMT6 Regulates DNA Methylation and Contributes to Global DNA Hypomethylation in Cancer. Cell Reports. 21: 3390-3397. PMID 29262320 DOI: 10.1016/j.celrep.2017.11.082  1
2017 Klein BJ, Ahmad S, Vann KR, Andrews FH, Mayo ZA, Bourriquen G, Bridgers JB, Zhang J, Strahl BD, Côté J, Kutateladze TG. Yaf9 subunit of the NuA4 and SWR1 complexes targets histone H3K27ac through its YEATS domain. Nucleic Acids Research. PMID 29145630 DOI: 10.1093/nar/gkx1151  1
2017 Penke TJR, McKay DJ, Strahl BD, Matera AG, Duronio RJ. Functional Redundancy of Variant and Canonical Histone H3 Lysine 9 Modification in Drosophila. Genetics. PMID 29133298 DOI: 10.1534/genetics.117.300480  1
2017 Tencer AH, Cox KL, Di L, Bridgers JB, Lyu J, Wang X, Sims JK, Weaver TM, Allen HF, Zhang Y, Gatchalian J, Darcy MA, Gibson MD, Ikebe J, Li W, ... ... Strahl BD, et al. Covalent Modifications of Histone H3K9 Promote Binding of CHD3. Cell Reports. 21: 455-466. PMID 29020631 DOI: 10.1016/j.celrep.2017.09.054  1
2017 Tencer AH, Gatchalian J, Klein BJ, Khan A, Zhang Y, Strahl BD, van Wely KHM, Kutateladze TG. A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure (London, England : 1993). PMID 28919441 DOI: 10.1016/j.str.2017.08.009  1
2017 Dronamraju R, Ramachandran S, Jha DK, Adams AT, DiFiore JV, Parra MA, Dokholyan NV, Strahl BD. Redundant Functions for Nap1 and Chz1 in H2A.Z Deposition. Scientific Reports. 7: 10791. PMID 28883625 DOI: 10.1038/s41598-017-11003-8  1
2017 McDaniel SL, Hepperla AJ, Huang J, Dronamraju R, Adams AT, Kulkarni VG, Davis IJ, Strahl BD. H3K36 Methylation Regulates Nutrient Stress Response in Saccharomyces cerevisiae by Enforcing Transcriptional Fidelity. Cell Reports. 19: 2371-2382. PMID 28614721 DOI: 10.1016/j.celrep.2017.05.057  1
2017 McDaniel SL, Strahl BD. Shaping the cellular landscape with Set2/SETD2 methylation. Cellular and Molecular Life Sciences : Cmls. PMID 28386724 DOI: 10.1007/s00018-017-2517-x  1
2017 Khan A, Bridgers JB, Strahl BD. Expanding the Reader Landscape of Histone Acylation. Structure (London, England : 1993). 25: 571-573. PMID 28380336 DOI: 10.1016/j.str.2017.03.010  1
2017 Meers MP, Henriques T, Lavender CA, McKay DJ, Strahl BD, Duronio RJ, Adelman K, Matera AG. Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity. Elife. 6. PMID 28346137 DOI: 10.7554/eLife.23249  1
2017 Shanle EK, Shinsky SA, Bridgers JB, Bae N, Sagum C, Krajewski K, Rothbart SB, Bedford MT, Strahl BD. Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions. Epigenetics & Chromatin. 10: 12. PMID 28293301 DOI: 10.1186/s13072-017-0117-5  1
2016 Savitsky P, Krojer T, Fujisawa T, Lambert JP, Picaud S, Wang CY, Shanle EK, Krajewski K, Friedrichsen H, Kanapin A, Goding C, Schapira M, Samsonova A, Strahl BD, Gingras AC, et al. Multivalent Histone and DNA Engagement by a PHD/BRD/PWWP Triple Reader Cassette Recruits ZMYND8 to K14ac-Rich Chromatin. Cell Reports. 17: 2724-2737. PMID 27926874 DOI: 10.1016/j.celrep.2016.11.014  1
2016 Strikoudis A, Lazaris C, Trimarchi T, Galvao Neto AL, Yang Y, Ntziachristos P, Rothbart S, Buckley S, Dolgalev I, Stadtfeld M, Strahl BD, Dynlacht BD, Tsirigos A, Aifantis I. Regulation of transcriptional elongation in pluripotency and cell differentiation by the PHD-finger protein Phf5a. Nature Cell Biology. PMID 27749823 DOI: 10.1038/ncb3424  0.28
2016 Charpentier TH, Waldo GL, Lowery-Gionta EG, Krajewski K, Strahl BD, Kash TL, Harden TK, Sondek J. Potent and Selective Peptide-based Inhibition of the G protein Gαq. The Journal of Biological Chemistry. PMID 27742837 DOI: 10.1074/jbc.M116.740407  1
2016 Andrews FH, Tong Q, Sullivan KD, Cornett EM, Zhang Y, Ali M, Ahn J, Pandey A, Guo AH, Strahl BD, Costello JC, Espinosa JM, Rothbart SB, Kutateladze TG. Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase. Cell Reports. 16: 3195-207. PMID 27653685 DOI: 10.1016/j.celrep.2016.08.050  1
2016 Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, ... ... Strahl BD, et al. Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1. Elife. 5. PMID 27595565 DOI: 10.7554/eLife.17101  1
2016 Penke TJ, McKay DJ, Strahl BD, Matera AG, Duronio RJ. Direct interrogation of the role of H3K9 in metazoan heterochromatin function. Genes & Development. PMID 27566777 DOI: 10.1101/gad.286278.116  1
2016 Chen H, Workman JJ, Strahl BD, Laribee RN. Histone H3 and TORC1 prevent organelle dysfunction and cell death by promoting nuclear retention of HMGB proteins. Epigenetics & Chromatin. 9: 34. PMID 27540414 DOI: 10.1186/s13072-016-0083-3  1
2016 Andrews FH, Strahl BD, Kutateladze TG. Insights into newly discovered marks and readers of epigenetic information. Nature Chemical Biology. 12: 662-8. PMID 27538025 DOI: 10.1038/nchembio.2149  1
2016 Hacker KE, Fahey CC, Shinsky SA, Chiang YJ, DiFiore JV, Jha DK, Vo AH, Shavit JA, Davis IJ, Strahl BD, Rathmell WK. Structure/Function Analysis of Recurrent Mutations in SETD2 Reveals a Critical and Conserved Role for a SET Domain Residue in Maintaining Protein Stability and H3K36 Trimethylation. The Journal of Biological Chemistry. PMID 27528607 DOI: 10.1074/jbc.M116.739375  1
2016 McDaniel SL, Fligor JE, Chun R, Cui H, Bridgers JB, DiFiore JV, Guo AH, Li B, Strahl BD. Combinatorial Histone Readout by the Dual Plant Homeodomains (PHD) of Rco1 Mediates Rpd3S Chromatin Recruitment and the Maintenance of Transcriptional Fidelity. The Journal of Biological Chemistry. PMID 27226578 DOI: 10.1074/jbc.M116.720193  1
2016 Bedard LG, Dronamraju R, Kerschner JL, Hunter GO, Axley ED, Boyd AK, Strahl BD, Mosley AL. Quantitative analysis of dynamic protein interactions during transcription reveals a role for casein kinase II in PAF complex phosphorylation and regulation of H2B monoubiquitylation. The Journal of Biological Chemistry. PMID 27143358 DOI: 10.1074/jbc.M116.727735  1
2016 Yumerefendi H, Lerner AM, Zimmerman SP, Hahn K, Bear JE, Strahl BD, Kuhlman B. Light-induced nuclear export reveals rapid dynamics of epigenetic modifications. Nature Chemical Biology. PMID 27089030 DOI: 10.1038/nchembio.2068  1
2016 Andrews FH, Shinsky SA, Shanle EK, Bridgers JB, Gest A, Tsun IK, Krajewski K, Shi X, Strahl BD, Kutateladze TG. The Taf14 YEATS domain is a reader of histone crotonylation. Nature Chemical Biology. PMID 27089029 DOI: 10.1038/nchembio.2065  1
2016 Gatchalian J, Gallardo CM, Shinsky SA, Ospina RR, Liendo AM, Krajewski K, Klein BJ, Andrews FH, Strahl BD, M van Wely KH, Kutateladze TG. Chromatin condensation and recruitment of PHD finger proteins to histone H3K4me3 are mutually exclusive. Nucleic Acids Research. PMID 27016734 DOI: 10.1093/nar/gkw193  1
2016 Andrews FH, Shanle EK, Strahl BD, Kutateladze TG. The essential role of acetyllysine binding by the YEATS domain in transcriptional regulation. Transcription. 7: 14-20. PMID 26934307 DOI: 10.1080/21541264.2015.1125987  1
2016 Hattori T, Lai D, Dementieva IS, Montaño SP, Kurosawa K, Zheng Y, Akin LR, Świst-Rosowska KM, Grzybowski AT, Koide A, Krajewski K, Strahl BD, Kelleher NL, Ruthenburg AJ, Koide S. Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proceedings of the National Academy of Sciences of the United States of America. PMID 26862167 DOI: 10.1073/pnas.1522691113  1
2016 Sorenson MR, Jha DK, Ucles SA, Flood DM, Strahl BD, Stevens SW, Kress TL. Histone H3K36 methylation regulates pre-mRNA splicing in Saccharomyces cerevisiae. Rna Biology. 0. PMID 26821844 DOI: 10.1080/15476286.2016.1144009  1
2016 Andrews FH, Gatchalian J, Krajewski K, Strahl BD, Kutateladze TG. Regulation of Methyllysine Readers through Phosphorylation. Acs Chemical Biology. PMID 26726824 DOI: 10.1021/acschembio.5b00802  1
2016 Shanle EK, Tsun IK, Strahl BD. A course-based undergraduate research experience investigating p300 bromodomain mutations. Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology. 44: 68-74. PMID 26537758 DOI: 10.1002/bmb.20927  1
2015 Cliffe AR, Arbuckle JH, Vogel JL, Geden MJ, Rothbart SB, Cusack CL, Strahl BD, Kristie TM, Deshmukh M. Neuronal Stress Pathway Mediating a Histone Methyl/Phospho Switch Is Required for Herpes Simplex Virus Reactivation. Cell Host & Microbe. 18: 649-58. PMID 26651941 DOI: 10.1016/j.chom.2015.11.007  1
2015 Chen S, Yang Z, Wilkinson AW, Deshpande AJ, Sidoli S, Krajewski K, Strahl BD, Garcia BA, Armstrong SA, Patel DJ, Gozani O. The PZP Domain of AF10 Senses Unmodified H3K27 to Regulate DOT1L-Mediated Methylation of H3K79. Molecular Cell. PMID 26439302 DOI: 10.1016/j.molcel.2015.08.019  1
2015 Shanle EK, Andrews FH, Meriesh H, McDaniel SL, Dronamraju R, DiFiore JV, Jha D, Wozniak GG, Bridgers JB, Kerschner JL, Krajewski K, Martín GM, Morrison AJ, Kutateladze TG, Strahl BD. Association of Taf14 with acetylated histone H3 directs gene transcription and the DNA damage response. Genes & Development. 29: 1795-800. PMID 26341557 DOI: 10.1101/gad.269977.115  1
2015 Simon JM, Parker JS, Liu F, Rothbart SB, Ait-Si-Ali S, Strahl BD, Jin J, Davis IJ, Mosley AL, Pattenden SG. A Role for Widely Interspaced Zinc Finger (WIZ) in Retention of the G9a Methyltransferase on Chromatin. The Journal of Biological Chemistry. 290: 26088-102. PMID 26338712 DOI: 10.1074/jbc.M115.654459  1
2015 Zhang ZM, Rothbart SB, Allison DF, Cai Q, Harrison JS, Li L, Wang Y, Strahl BD, Wang GG, Song J. An Allosteric Interaction Links USP7 to Deubiquitination and Chromatin Targeting of UHRF1. Cell Reports. 12: 1400-6. PMID 26299963 DOI: 10.1016/j.celrep.2015.07.046  1
2015 Ali M, Daze KD, Strongin DE, Rothbart SB, Rincon-Arano H, Allen HF, Li J, Strahl BD, Hof F, Kutateladze TG. Molecular insight into inhibition of the methylated histone-plant homeodomain complexes by calixarenes. The Journal of Biological Chemistry. PMID 26229108 DOI: 10.1074/jbc.M115.669333  1
2015 Rothbart SB, Dickson BM, Raab JR, Grzybowski AT, Krajewski K, Guo AH, Shanle EK, Josefowicz SZ, Fuchs SM, Allis CD, Magnuson TR, Ruthenburg AJ, Strahl BD. An Interactive Database for the Assessment of Histone Antibody Specificity. Molecular Cell. 59: 502-11. PMID 26212453 DOI: 10.1016/j.molcel.2015.06.022  1
2015 Wang L, Xie L, Ramachandran S, Lee Y, Yan Z, Zhou L, Krajewski K, Liu F, Zhu C, Chen DJ, Strahl BD, Jin J, Dokholyan NV, Chen X. Non-canonical Bromodomain within DNA-PKcs Promotes DNA Damage Response and Radioresistance through Recognizing an IR-Induced Acetyl-Lysine on H2AX. Chemistry & Biology. PMID 26119999 DOI: 10.1016/j.chembiol.2015.05.014  1
2015 Rothbart SB, Dickson BM, Strahl BD. From histones to ribosomes: a chromatin regulator tangoes with translation. Cancer Discovery. 5: 228-30. PMID 25749972 DOI: 10.1158/2159-8290.CD-15-0073  1
2015 McKay DJ, Klusza S, Penke TJ, Meers MP, Curry KP, McDaniel SL, Malek PY, Cooper SW, Tatomer DC, Lieb JD, Strahl BD, Duronio RJ, Matera AG. Interrogating the function of metazoan histones using engineered gene clusters. Developmental Cell. 32: 373-86. PMID 25669886 DOI: 10.1016/j.devcel.2014.12.025  1
2015 Jha DK, Strahl BD. Erratum: An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair. Nature Communications. 6: 6015. PMID 25655584 DOI: 10.1038/ncomms7015  1
2015 Tong Q, Mazur SJ, Rincon-Arano H, Rothbart SB, Kuznetsov DM, Cui G, Liu WH, Gete Y, Klein BJ, Jenkins L, Mer G, Kutateladze AG, Strahl BD, Groudine M, Appella E, et al. An acetyl-methyl switch drives a conformational change in p53. Structure (London, England : 1993). 23: 322-31. PMID 25651062 DOI: 10.1016/j.str.2014.12.010  1
2015 Perfetti MT, Baughman BM, Dickson BM, Mu Y, Cui G, Mader P, Dong A, Norris JL, Rothbart SB, Strahl BD, Brown PJ, Janzen WP, Arrowsmith CH, Mer G, McBride KM, et al. Identification of a fragment-like small molecule ligand for the methyl-lysine binding protein, 53BP1. Acs Chemical Biology. 10: 1072-81. PMID 25590533 DOI: 10.1021/cb500956g  1
2015 Tong Q, Cui G, Botuyan MV, Rothbart SB, Hayashi R, Musselman CA, Singh N, Appella E, Strahl BD, Mer G, Kutateladze TG. Structural plasticity of methyllysine recognition by the tandem tudor domain of 53BP1. Structure (London, England : 1993). 23: 312-21. PMID 25579814 DOI: 10.1016/j.str.2014.11.013  1
2015 Dumesic PA, Homer CM, Moresco JJ, Pack LR, Shanle EK, Coyle SM, Strahl BD, Fujimori DG, Yates JR, Madhani HD. Product binding enforces the genomic specificity of a yeast polycomb repressive complex. Cell. 160: 204-18. PMID 25533783 DOI: 10.1016/j.cell.2014.11.039  1
2014 Gilbert TM, McDaniel SL, Byrum SD, Cades JA, Dancy BC, Wade H, Tackett AJ, Strahl BD, Taverna SD. A PWWP domain-containing protein targets the NuA3 acetyltransferase complex via histone H3 lysine 36 trimethylation to coordinate transcriptional elongation at coding regions. Molecular & Cellular Proteomics : McP. 13: 2883-95. PMID 25104842 DOI: 10.1074/mcp.M114.038224  1
2014 Jha DK, Pfister SX, Humphrey TC, Strahl BD. SET-ting the stage for DNA repair. Nature Structural & Molecular Biology. 21: 655-7. PMID 25093525 DOI: 10.1038/nsmb.2866  1
2014 Wozniak GG, Strahl BD. Catalysis-dependent stabilization of Bre1 fine-tunes histone H2B ubiquitylation to regulate gene transcription. Genes & Development. 28: 1647-52. PMID 25085417 DOI: 10.1101/gad.243121.114  1
2014 Shanle EK, Rothbart SB, Strahl BD. Chromatin biochemistry enters the next generation of code 'seq-ing'. Nature Methods. 11: 799-800. PMID 25075906 DOI: 10.1038/nmeth.3044  1
2014 Jha DK, Strahl BD. An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair. Nature Communications. 5: 3965. PMID 24910128 DOI: 10.1038/ncomms4965  1
2014 Greer EL, Beese-Sims SE, Brookes E, Spadafora R, Zhu Y, Rothbart SB, Aristizábal-Corrales D, Chen S, Badeaux AI, Jin Q, Wang W, Strahl BD, Colaiácovo MP, Shi Y. A histone methylation network regulates transgenerational epigenetic memory in C. elegans. Cell Reports. 7: 113-26. PMID 24685137 DOI: 10.1016/j.celrep.2014.02.044  1
2014 Wozniak GG, Strahl BD. Hitting the 'mark': interpreting lysine methylation in the context of active transcription. Biochimica Et Biophysica Acta. 1839: 1353-61. PMID 24631869 DOI: 10.1016/j.bbagrm.2014.03.002  1
2014 Rothbart SB, Strahl BD. Interpreting the language of histone and DNA modifications. Biochimica Et Biophysica Acta. 1839: 627-43. PMID 24631868 DOI: 10.1016/j.bbagrm.2014.03.001  1
2014 Kim HS, Mukhopadhyay R, Rothbart SB, Silva AC, Vanoosthuyse V, Radovani E, Kislinger T, Roguev A, Ryan CJ, Xu J, Jahari H, Hardwick KG, Greenblatt JF, Krogan NJ, Fillingham JS, ... Strahl BD, et al. Identification of a BET family bromodomain/casein kinase II/TAF-containing complex as a regulator of mitotic condensin function. Cell Reports. 6: 892-905. PMID 24565511 DOI: 10.1016/j.celrep.2014.01.029  1
2014 Klein BJ, Piao L, Xi Y, Rincon-Arano H, Rothbart SB, Peng D, Wen H, Larson C, Zhang X, Zheng X, Cortazar MA, Peña PV, Mangan A, Bentley DL, Strahl BD, et al. The histone-H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers. Cell Reports. 6: 325-35. PMID 24412361 DOI: 10.1016/j.celrep.2013.12.021  1
2014 Dronamraju R, Strahl BD. A feed forward circuit comprising Spt6, Ctk1 and PAF regulates Pol II CTD phosphorylation and transcription elongation. Nucleic Acids Research. 42: 870-81. PMID 24163256 DOI: 10.1093/nar/gkt1003  1
2013 Kinkelin K, Wozniak GG, Rothbart SB, Lidschreiber M, Strahl BD, Cramer P. Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue. Proceedings of the National Academy of Sciences of the United States of America. 110: 15277-82. PMID 24003114 DOI: 10.1073/pnas.1311010110  1
2013 Hattori T, Taft JM, Swist KM, Luo H, Witt H, Slattery M, Koide A, Ruthenburg AJ, Krajewski K, Strahl BD, White KP, Farnham PJ, Zhao Y, Koide S. Recombinant antibodies to histone post-translational modifications. Nature Methods. 10: 992-5. PMID 23955773 DOI: 10.1038/nmeth.2605  1
2013 McDaniel SL, Strahl BD. Stress-free with Rpd3: a unique chromatin complex mediates the response to oxidative stress. Molecular and Cellular Biology. 33: 3726-7. PMID 23938299 DOI: 10.1128/MCB.01000-13  1
2013 Gatchalian J, Fütterer A, Rothbart SB, Tong Q, Rincon-Arano H, Sánchez de Diego A, Groudine M, Strahl BD, Martínez-A C, van Wely KH, Kutateladze TG. Dido3 PHD modulates cell differentiation and division. Cell Reports. 4: 148-58. PMID 23831028 DOI: 10.1016/j.celrep.2013.06.014  1
2013 Ali M, Rincón-Arano H, Zhao W, Rothbart SB, Tong Q, Parkhurst SM, Strahl BD, Deng LW, Groudine M, Kutateladze TG. Molecular basis for chromatin binding and regulation of MLL5. Proceedings of the National Academy of Sciences of the United States of America. 110: 11296-301. PMID 23798402 DOI: 10.1073/pnas.1310156110  1
2013 Rothbart SB, Dickson BM, Ong MS, Krajewski K, Houliston S, Kireev DB, Arrowsmith CH, Strahl BD. Multivalent histone engagement by the linked tandem Tudor and PHD domains of UHRF1 is required for the epigenetic inheritance of DNA methylation. Genes & Development. 27: 1288-98. PMID 23752590 DOI: 10.1101/gad.220467.113  1
2013 Law JA, Du J, Hale CJ, Feng S, Krajewski K, Palanca AM, Strahl BD, Patel DJ, Jacobsen SE. Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature. 498: 385-9. PMID 23636332 DOI: 10.1038/nature12178  1
2013 Cai L, Rothbart SB, Lu R, Xu B, Chen WY, Tripathy A, Rockowitz S, Zheng D, Patel DJ, Allis CD, Strahl BD, Song J, Wang GG. An H3K36 methylation-engaging Tudor motif of polycomb-like proteins mediates PRC2 complex targeting. Molecular Cell. 49: 571-82. PMID 23273982 DOI: 10.1016/j.molcel.2012.11.026  1
2012 Ali M, Yan K, Lalonde ME, Degerny C, Rothbart SB, Strahl BD, Côté J, Yang XJ, Kutateladze TG. Tandem PHD fingers of MORF/MOZ acetyltransferases display selectivity for acetylated histone H3 and are required for the association with chromatin. Journal of Molecular Biology. 424: 328-38. PMID 23063713 DOI: 10.1016/j.jmb.2012.10.004  1
2012 Nishikori S, Hattori T, Fuchs SM, Yasui N, Wojcik J, Koide A, Strahl BD, Koide S. Broad ranges of affinity and specificity of anti-histone antibodies revealed by a quantitative peptide immunoprecipitation assay. Journal of Molecular Biology. 424: 391-9. PMID 23041298 DOI: 10.1016/j.jmb.2012.09.022  1
2012 Rothbart SB, Krajewski K, Nady N, Tempel W, Xue S, Badeaux AI, Barsyte-Lovejoy D, Martinez JY, Bedford MT, Fuchs SM, Arrowsmith CH, Strahl BD. Association of UHRF1 with methylated H3K9 directs the maintenance of DNA methylation. Nature Structural & Molecular Biology. 19: 1155-60. PMID 23022729 DOI: 10.1038/nsmb.2391  1
2012 Bánfai B, Jia H, Khatun J, Wood E, Risk B, Gundling WE, Kundaje A, Gunawardena HP, Yu Y, Xie L, Krajewski K, Strahl BD, Chen X, Bickel P, Giddings MC, et al. Long noncoding RNAs are rarely translated in two human cell lines. Genome Research. 22: 1646-57. PMID 22955977 DOI: 10.1101/gr.134767.111  1
2012 Rothbart SB, Krajewski K, Strahl BD, Fuchs SM. Peptide microarrays to interrogate the "histone code". Methods in Enzymology. 512: 107-35. PMID 22910205 DOI: 10.1016/B978-0-12-391940-3.00006-8  1
2012 Rizzardi LF, Dorn ES, Strahl BD, Cook JG. DNA replication origin function is promoted by H3K4 di-methylation in Saccharomyces cerevisiae. Genetics. 192: 371-84. PMID 22851644 DOI: 10.1534/genetics.112.142349  1
2012 Rothbart SB, Lin S, Britton LM, Krajewski K, Keogh MC, Garcia BA, Strahl BD. Poly-acetylated chromatin signatures are preferred epitopes for site-specific histone H4 acetyl antibodies. Scientific Reports. 2: 489. PMID 22761995 DOI: 10.1038/srep00489  1
2012 Stolzenburg S, Rots MG, Beltran AS, Rivenbark AG, Yuan X, Qian H, Strahl BD, Blancafort P. Targeted silencing of the oncogenic transcription factor SOX2 in breast cancer. Nucleic Acids Research. 40: 6725-40. PMID 22561374 DOI: 10.1093/nar/gks360  1
2012 Rivenbark AG, Stolzenburg S, Beltran AS, Yuan X, Rots MG, Strahl BD, Blancafort P. Epigenetic reprogramming of cancer cells via targeted DNA methylation. Epigenetics : Official Journal of the Dna Methylation Society. 7: 350-60. PMID 22419067 DOI: 10.4161/epi.19507  1
2012 Fuchs SM, Kizer KO, Braberg H, Krogan NJ, Strahl BD. RNA polymerase II carboxyl-terminal domain phosphorylation regulates protein stability of the Set2 methyltransferase and histone H3 di- and trimethylation at lysine 36. The Journal of Biological Chemistry. 287: 3249-56. PMID 22157004 DOI: 10.1074/jbc.M111.273953  1
2011 Fuchs SM, Strahl BD. Antibody recognition of histone post-translational modifications: emerging issues and future prospects. Epigenomics. 3: 247-9. PMID 22122332 DOI: 10.2217/epi.11.23  1
2011 Kerr SC, Azzouz N, Fuchs SM, Collart MA, Strahl BD, Corbett AH, Laribee RN. The Ccr4-Not complex interacts with the mRNA export machinery. Plos One. 6: e18302. PMID 21464899 DOI: 10.1371/journal.pone.0018302  1
2011 Gardner KE, Allis CD, Strahl BD. Operating on chromatin, a colorful language where context matters. Journal of Molecular Biology. 409: 36-46. PMID 21272588 DOI: 10.1016/j.jmb.2011.01.040  1
2011 Ramachandran S, Vogel L, Strahl BD, Dokholyan NV. Thermodynamic stability of histone H3 is a necessary but not sufficient driving force for its evolutionary conservation. Plos Computational Biology. 7: e1001042. PMID 21253558 DOI: 10.1371/journal.pcbi.1001042  1
2011 Gardner KE, Zhou L, Parra MA, Chen X, Strahl BD. Identification of lysine 37 of histone H2B as a novel site of methylation. Plos One. 6: e16244. PMID 21249157 DOI: 10.1371/journal.pone.0016244  1
2011 Fuchs SM, Krajewski K, Baker RW, Miller VL, Strahl BD. Influence of combinatorial histone modifications on antibody and effector protein recognition. Current Biology : Cb. 21: 53-8. PMID 21167713 DOI: 10.1016/j.cub.2010.11.058  1
2009 Nakanishi S, Lee JS, Gardner KE, Gardner JM, Takahashi YH, Chandrasekharan MB, Sun ZW, Osley MA, Strahl BD, Jaspersen SL, Shilatifard A. Histone H2BK123 monoubiquitination is the critical determinant for H3K4 and H3K79 trimethylation by COMPASS and Dot1. The Journal of Cell Biology. 186: 371-7. PMID 19667127 DOI: 10.1083/jcb.200906005  1
2009 Lickwar CR, Rao B, Shabalin AA, Nobel AB, Strahl BD, Lieb JD. The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency. Plos One. 4: e4886. PMID 19295910 DOI: 10.1371/journal.pone.0004886  1
2009 Fuchs SM, Laribee RN, Strahl BD. Protein modifications in transcription elongation. Biochimica Et Biophysica Acta. 1789: 26-36. PMID 18718879 DOI: 10.1016/j.bbagrm.2008.07.008  1
2008 Henikoff S, Strahl BD, Warburton PE. Epigenomics: a roadmap to chromatin. Science (New York, N.Y.). 322: 853. PMID 18988822 DOI: 10.1126/science.322.5903.853a  1
2008 Youdell ML, Kizer KO, Kisseleva-Romanova E, Fuchs SM, Duro E, Strahl BD, Mellor J. Roles for Ctk1 and Spt6 in regulating the different methylation states of histone H3 lysine 36. Molecular and Cellular Biology. 28: 4915-26. PMID 18541663 DOI: 10.1128/MCB.00001-08  1
2008 Merker JD, Dominska M, Greenwell PW, Rinella E, Bouck DC, Shibata Y, Strahl BD, Mieczkowski P, Petes TD. The histone methylase Set2p and the histone deacetylase Rpd3p repress meiotic recombination at the HIS4 meiotic recombination hotspot in Saccharomyces cerevisiae. Dna Repair. 7: 1298-308. PMID 18515193 DOI: 10.1016/j.dnarep.2008.04.009  1
2007 Rivenbark AG, Strahl BD. Molecular biology. Unlocking cell fate. Science (New York, N.Y.). 318: 403-4. PMID 17947570 DOI: 10.1126/science.1150321  1
2007 Wyce A, Xiao T, Whelan KA, Kosman C, Walter W, Eick D, Hughes TR, Krogan NJ, Strahl BD, Berger SL. H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. Molecular Cell. 27: 275-88. PMID 17643376 DOI: 10.1016/j.molcel.2007.01.035  1
2007 Laribee RN, Fuchs SM, Strahl BD. H2B ubiquitylation in transcriptional control: a FACT-finding mission. Genes & Development. 21: 737-43. PMID 17403775 DOI: 10.1101/gad.1541507  1
2007 Laribee RN, Shibata Y, Mersman DP, Collins SR, Kemmeren P, Roguev A, Weissman JS, Briggs SD, Krogan NJ, Strahl BD. CCR4/NOT complex associates with the proteasome and regulates histone methylation. Proceedings of the National Academy of Sciences of the United States of America. 104: 5836-41. PMID 17389396 DOI: 10.1073/pnas.0607996104  1
2007 Garcia BA, Hake SB, Diaz RL, Kauer M, Morris SA, Recht J, Shabanowitz J, Mishra N, Strahl BD, Allis CD, Hunt DF. Organismal differences in post-translational modifications in histones H3 and H4. The Journal of Biological Chemistry. 282: 7641-55. PMID 17194708 DOI: 10.1074/jbc.M607900200  1
2007 Morris SA, Rao B, Garcia BA, Hake SB, Diaz RL, Shabanowitz J, Hunt DF, Allis CD, Lieb JD, Strahl BD. Identification of histone H3 lysine 36 acetylation as a highly conserved histone modification. The Journal of Biological Chemistry. 282: 7632-40. PMID 17189264 DOI: 10.1074/jbc.M607909200  1
2007 Xiao T, Shibata Y, Rao B, Laribee RN, O'Rourke R, Buck MJ, Greenblatt JF, Krogan NJ, Lieb JD, Strahl BD. The RNA polymerase II kinase Ctk1 regulates positioning of a 5' histone methylation boundary along genes. Molecular and Cellular Biology. 27: 721-31. PMID 17088384 DOI: 10.1128/MCB.01628-06  1
2006 Kizer KO, Xiao T, Strahl BD. Accelerated nuclei preparation and methods for analysis of histone modifications in yeast. Methods (San Diego, Calif.). 40: 296-302. PMID 17101440 DOI: 10.1016/j.ymeth.2006.06.022  1
2006 Biswas D, Dutta-Biswas R, Mitra D, Shibata Y, Strahl BD, Formosa T, Stillman DJ. Opposing roles for Set2 and yFACT in regulating TBP binding at promoters. The Embo Journal. 25: 4479-89. PMID 16977311 DOI: 10.1038/sj.emboj.7601333  1
2006 Tripic T, Edmondson DG, Davie JK, Strahl BD, Dent SY. The Set2 methyltransferase associates with Ssn6 yet Tup1-Ssn6 repression is independent of histone methylation. Biochemical and Biophysical Research Communications. 339: 905-14. PMID 16329992 DOI: 10.1016/j.bbrc.2005.11.103  1
2006 Vojnic E, Simon B, Strahl BD, Sattler M, Cramer P. Structure and carboxyl-terminal domain (CTD) binding of the Set2 SRI domain that couples histone H3 Lys36 methylation to transcription. The Journal of Biological Chemistry. 281: 13-5. PMID 16286474 DOI: 10.1074/jbc.C500423200  1
2005 Keogh MC, Kurdistani SK, Morris SA, Ahn SH, Podolny V, Collins SR, Schuldiner M, Chin K, Punna T, Thompson NJ, Boone C, Emili A, Weissman JS, Hughes TR, Strahl BD, et al. Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex. Cell. 123: 593-605. PMID 16286008 DOI: 10.1016/j.cell.2005.10.025  1
2005 Rao B, Shibata Y, Strahl BD, Lieb JD. Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide. Molecular and Cellular Biology. 25: 9447-59. PMID 16227595 DOI: 10.1128/MCB.25.21.9447-9459.2005  1
2005 Adhvaryu KK, Morris SA, Strahl BD, Selker EU. Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa. Eukaryotic Cell. 4: 1455-64. PMID 16087750 DOI: 10.1128/EC.4.8.1455-1464.2005  1
2005 Morris SA, Shibata Y, Noma K, Tsukamoto Y, Warren E, Temple B, Grewal SI, Strahl BD. Histone H3 K36 methylation is associated with transcription elongation in Schizosaccharomyces pombe. Eukaryotic Cell. 4: 1446-54. PMID 16087749 DOI: 10.1128/EC.4.8.1446-1454.2005  1
2005 Laribee RN, Krogan NJ, Xiao T, Shibata Y, Hughes TR, Greenblatt JF, Strahl BD. BUR kinase selectively regulates H3 K4 trimethylation and H2B ubiquitylation through recruitment of the PAF elongation complex. Current Biology : Cb. 15: 1487-93. PMID 16040246 DOI: 10.1016/j.cub.2005.07.028  1
2005 Kizer KO, Phatnani HP, Shibata Y, Hall H, Greenleaf AL, Strahl BD. A novel domain in Set2 mediates RNA polymerase II interaction and couples histone H3 K36 methylation with transcript elongation. Molecular and Cellular Biology. 25: 3305-16. PMID 15798214 DOI: 10.1128/MCB.25.8.3305-3316.2005  1
2005 Xiao T, Kao CF, Krogan NJ, Sun ZW, Greenblatt JF, Osley MA, Strahl BD. Histone H2B ubiquitylation is associated with elongating RNA polymerase II. Molecular and Cellular Biology. 25: 637-51. PMID 15632065 DOI: 10.1128/MCB.25.2.637-651.2005  1
2005 Lee DY, Teyssier C, Strahl BD, Stallcup MR. Role of protein methylation in regulation of transcription. Endocrine Reviews. 26: 147-70. PMID 15479858 DOI: 10.1210/er.2004-0008  1
2004 Lee CK, Shibata Y, Rao B, Strahl BD, Lieb JD. Evidence for nucleosome depletion at active regulatory regions genome-wide. Nature Genetics. 36: 900-5. PMID 15247917 DOI: 10.1038/ng1400  1
2003 Anest V, Hanson JL, Cogswell PC, Steinbrecher KA, Strahl BD, Baldwin AS. A nucleosomal function for IkappaB kinase-alpha in NF-kappaB-dependent gene expression. Nature. 423: 659-63. PMID 12789343 DOI: 10.1038/nature01648  1
2003 Xiao T, Hall H, Kizer KO, Shibata Y, Hall MC, Borchers CH, Strahl BD. Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast. Genes & Development. 17: 654-63. PMID 12629047 DOI: 10.1101/gad.1055503  1
2002 Briggs SD, Xiao T, Sun ZW, Caldwell JA, Shabanowitz J, Hunt DF, Allis CD, Strahl BD. Gene silencing: trans-histone regulatory pathway in chromatin. Nature. 418: 498. PMID 12152067 DOI: 10.1038/nature00970  1
2002 Li J, Lin Q, Yoon HG, Huang ZQ, Strahl BD, Allis CD, Wong J. Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor Molecular and Cellular Biology. 22: 5688-5697. PMID 12138181 DOI: 10.1128/MCB.22.16.5688-5697.2002  1
2002 Miller WL, Shafiee-Kermani F, Strahl BD, Huang HJ. The nature of FSH induction by GnRH. Trends in Endocrinology and Metabolism: Tem. 13: 257-63. PMID 12128287  1
2002 Briggs SD, Strahl BD. Unraveling heterochromatin. Nature Genetics. 30: 241-2. PMID 11919553 DOI: 10.1038/ng0302-241  1
2002 Strahl BD, Grant PA, Briggs SD, Sun ZW, Bone JR, Caldwell JA, Mollah S, Cook RG, Shabanowitz J, Hunt DF, Allis CD. Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression. Molecular and Cellular Biology. 22: 1298-306. PMID 11839797 DOI: 10.1128/MCB.22.5.1298-1306.2002  1
2002 Bryk M, Briggs SD, Strahl BD, Curcio MJ, Allis CD, Winston F. Evidence that Set1, a factor required for methylation of histone H3, regulates rDNA silencing in S. cerevisiae by a Sir2-independent mechanism. Current Biology : Cb. 12: 165-70. PMID 11818070 DOI: 10.1016/S0960-9822(01)00652-2  1
2001 Huang HJ, Sebastian J, Strahl BD, Wu JC, Miller WL. The Promoter for the Ovine Follicle-Stimulating Hormone-β Gene (FSHβ) Confers FSHβ-Like Expression on Luciferase in Transgenic Mice: Regulatory Studies in Vivo and in Vitro. Endocrinology. 142: 2260-2266. PMID 28201426 DOI: 10.1210/endo.142.6.8202  1
2001 Huang HJ, Sebastian J, Strahl BD, Wu JC, Miller WL. Transcriptional Regulation of the Ovine Follicle-Stimulating Hormone-β Gene by Activin and Gonadotropin-Releasing Hormone (GnRH): Involvement of Two Proximal Activator Protein-1 Sites for GnRH Stimulation. Endocrinology. 142: 2267-2274. PMID 28201312 DOI: 10.1210/endo.142.6.8203  1
1998 Strahl BD, Huang HJ, Sebastian J, Ghosh BR, Miller WL. Transcriptional Activation of the Ovine Follicle-Stimulating Hormone β-Subunit Gene by Gonadotropin-Releasing Hormone: Involvement of Two Activating Protein-1-Binding Sites and Protein Kinase C* *This work was supported by the North Carolina State University Agricultural Research Service, NICHD Grant 34863, and the Mellon Foundation. Endocrinology. 139: 4455-4465. PMID 28200182 DOI: 10.1210/endo.139.11.6281  1
1997 Strahl BD, Huang HJ, Pedersen NR, Wu JC, Ghosh BR, Miller WL. Two Proximal Activating Protein-1-Binding Sites Are Sufficient to Stimulate Transcription of the Ovine Follicle-Stimulating Hormone-β Gene. Endocrinology. 138: 2621-2631. PMID 28199644 DOI: 10.1210/endo.138.6.5205  1
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