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Dongping Zhong - Publications

Affiliations: 
Chemistry and Biochemistry Ohio State University, Columbus, Columbus, OH 
Area:
Femtobiology, Biomolecular Interactions, Protein Dynamics
Website:
http://chemistry.osu.edu/faculty/zhong
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115 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zhou Y, Tang S, Chen Z, Zhou Z, Huang J, Kang XW, Zou S, Wang B, Zhang T, Ding B, Zhong D. Origin of the multi-phasic quenching dynamics in the BLUF domains across the species. Nature Communications. 15: 623. PMID 38245518 DOI: 10.1038/s41467-023-44565-5  0.365
2023 Zhang Y, Yang J, Liu N, Wang L, Lu F, Chen J, Zhong D. Ultrafast Nonequilibrium Dynamics of Vibrationally Hot Electron Transfer in Flavodoxin. The Journal of Physical Chemistry Letters. 14: 10657-10663. PMID 38031667 DOI: 10.1021/acs.jpclett.3c02438  0.36
2022 Wu R, Yang C, Wang L, Zhong D. Ultrafast Dynamics of Fatty Acid Photodecarboxylase in Anionic Semiquinone State. The Journal of Physical Chemistry Letters. 13: 11023-11028. PMID 36413431 DOI: 10.1021/acs.jpclett.2c02183  0.324
2022 Zhou Z, Chen Z, Kang XW, Zhou Y, Wang B, Tang S, Zou S, Zhang Y, Hu Q, Bai F, Ding B, Zhong D. The nature of proton-coupled electron transfer in a blue light using flavin domain. Proceedings of the National Academy of Sciences of the United States of America. 119: e2203996119. PMID 35737837 DOI: 10.1073/pnas.2203996119  0.335
2022 Yang J, Zhang Y, Lu Y, Wang L, Lu F, Zhong D. Ultrafast Dynamics of Nonequilibrium Short-Range Electron Transfer in Semiquinone Flavodoxin. The Journal of Physical Chemistry Letters. 3202-3208. PMID 35377652 DOI: 10.1021/acs.jpclett.2c00057  0.394
2022 Li X, Liu Z, Ren H, Kundu M, Zhong FW, Wang L, Gao J, Zhong D. Dynamics and mechanism of dimer dissociation of photoreceptor UVR8. Nature Communications. 13: 93. PMID 35013256 DOI: 10.1038/s41467-021-27756-w  0.664
2021 Yang J, Zhang Y, He TF, Lu Y, Wang L, Ding B, Zhong D. Ultrafast nonequilibrium dynamics of short-range protein electron transfer in flavodoxin. Physical Chemistry Chemical Physics : Pccp. 24: 382-391. PMID 34889914 DOI: 10.1039/d1cp04445a  0.391
2021 Wang Y, Veglia G, Zhong D, Gao J. Activation mechanism of cryptochrome through an allosteric switch. Science Advances. 7. PMID 34144991 DOI: 10.1126/sciadv.abg3815  0.316
2021 Macro N, Chen L, Yang Y, Mondal T, Wang L, Horovitz A, Zhong D. Slowdown of Water Dynamics from the Top to the Bottom of the GroEL Cavity. The Journal of Physical Chemistry Letters. 5723-5730. PMID 34129341 DOI: 10.1021/acs.jpclett.1c01216  0.351
2020 Li X, Liu Z, Ren H, Kundu M, Wang L, Gao J, Zhong D. Dynamics and mechanism of light harvesting in UV photoreceptor UVR8. Chemical Science. 11: 12553-12569. PMID 34094455 DOI: 10.1039/d0sc04909c  0.615
2020 Wang D, Li X, Wang L, Yang X, Zhong D. Elucidating Ultrafast Multiphasic Dynamics in Photoisomerization of Cyanobacteriochrome. The Journal of Physical Chemistry Letters. PMID 32940473 DOI: 10.1021/Acs.Jpclett.0C02467  0.482
2020 Li X, Ren H, Kundu M, Liu Z, Zhong FW, Wang L, Gao J, Zhong D. A leap in quantum efficiency through light harvesting in photoreceptor UVR8. Nature Communications. 11: 4316. PMID 32859932 DOI: 10.1038/S41467-020-17838-6  0.607
2020 Wang D, Li X, Zhang S, Wang L, Yang X, Zhong D. Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 32759207 DOI: 10.1073/Pnas.2001114117  0.516
2020 Wang D, Qin Y, Zhang M, Li X, Wang L, Yang X, Zhong D. The Origin of Ultrafast Multiphasic Dynamics in Photoisomerization of Bacteriophytochrome. The Journal of Physical Chemistry Letters. PMID 32614188 DOI: 10.1021/Acs.Jpclett.0C01394  0.782
2020 Lu Y, Kundu M, Zhong D. Effects of nonequilibrium fluctuations on ultrafast short-range electron transfer dynamics. Nature Communications. 11: 2822. PMID 32499536 DOI: 10.1038/S41467-020-15535-Y  0.448
2020 He J, Liu Z, Cao Z, Zhang H, Meng Y, Chen B, Zhong D. Visualizing the Redox Reaction Dynamics of Perovskite Nanocrystals in Real and Reciprocal Space. The Journal of Physical Chemistry Letters. PMID 32119555 DOI: 10.1021/Acs.Jpclett.0C00265  0.354
2020 Lu Y, Zhong D. Nonequilibrium dynamics of photoinduced forward and backward electron transfer reactions. The Journal of Chemical Physics. 152: 065102. PMID 32061242 DOI: 10.1063/1.5132814  0.482
2020 Houston P, Macro N, Kang M, Chen L, Yang J, Wang L, Wu Z, Zhong D. Ultrafast Dynamics of Water-Protein Coupled Motions Around the Surface of Eye Crystallin. Journal of the American Chemical Society. PMID 31991083 DOI: 10.1021/Jacs.9B13506  0.456
2019 Wang D, Qin Y, Zhang S, Wang L, Yang X, Zhong D. Elucidating the Molecular Mechanism of Ultrafast Pfr-State Photoisomerization in Bathy Bacteriophytochrome PaBphP. The Journal of Physical Chemistry Letters. 6197-6201. PMID 31577445 DOI: 10.1021/Acs.Jpclett.9B02446  0.764
2019 Lu Y, Zhong D. Understanding of Short-Range Electron Transfer Dynamics in Proteins. The Journal of Physical Chemistry Letters. PMID 30607958 DOI: 10.1021/Acs.Jpclett.8B03749  0.464
2018 Wang X, Zhou Z, Tang Y, Chen J, Zhong D, Xu JH. Excited State Decay Pathways of 2'-deoxy-5-Methylcytidine and Deoxycytidine Revisited in Solution: A Comprehensive Kinetic Study by Femtosecond Transient Absorption. The Journal of Physical Chemistry. B. PMID 29939745 DOI: 10.1021/Acs.Jpcb.8B00927  0.386
2018 Kundu M, He TF, Lu Y, Wang L, Zhong D. Short-Range Electron Transfer in Reduced Flavodoxin: Ultrafast Nonequilibrium Dynamics Coupled with Protein Fluctuations. The Journal of Physical Chemistry Letters. PMID 29722985 DOI: 10.1021/Acs.Jpclett.8B00882  0.487
2017 Zhang M, Wang L, Zhong D. Photolyase: Dynamics and electron-transfer mechanisms of DNA repair. Archives of Biochemistry and Biophysics. PMID 28802828 DOI: 10.1016/J.Abb.2017.08.007  0.455
2017 Yang J, Wang Y, Wang L, Zhong D. Mapping Hydration Dynamics Around a β-Barrel Protein. Journal of the American Chemical Society. PMID 28248506 DOI: 10.1021/Jacs.6B12463  0.465
2017 Qin Y, Zhang L, Wang L, Zhong D. Observation of the Global Dynamic Collectivity of a Hydration Shell Around Apomyoglobin. The Journal of Physical Chemistry Letters. PMID 28212034 DOI: 10.1021/Acs.Jpclett.7B00205  0.784
2016 Zhang M, Wang L, Zhong D. Photolyase: Dynamics and Mechanisms of Repair of Sun-Induced DNA Damage. Photochemistry and Photobiology. PMID 27991674 DOI: 10.1111/Php.12695  0.465
2016 Zhang M, Wang L, Shu S, Sancar A, Zhong D. Bifurcating electron-transfer pathways in DNA photolyases determine the repair quantum yield. Science (New York, N.Y.). 354: 209-213. PMID 27738168 DOI: 10.1126/Science.Aah6071  0.372
2016 Qin Y, Jia M, Yang J, Wang D, Wang L, Xu J, Zhong D. The Molecular Origin of Ultrafast Water-Protein Coupled Interactions. The Journal of Physical Chemistry Letters. PMID 27700094 DOI: 10.1021/Acs.Jpclett.6B01954  0.77
2016 Gu X, Park SY, Tonelli M, Cornilescu G, Xia T, Zhong D, Schroeder SJ. NMR Structures and Dynamics in a Prohead RNA Bulge Loop that Specifically Binds Metal Ions. The Journal of Physical Chemistry Letters. PMID 27631837 DOI: 10.1021/Acs.Jpclett.6B01465  0.536
2016 Qin Y, Wang L, Zhong D. Dynamics and mechanism of ultrafast water-protein interactions. Proceedings of the National Academy of Sciences of the United States of America. PMID 27339138 DOI: 10.1073/Pnas.1602916113  0.781
2016 Faraji S, Zhong D, Dreuw A. Characterization of the Intermediate in and Identification of the Repair Mechanism of (6-4) Photolesions by Photolyases. Angewandte Chemie (International Ed. in English). PMID 26996356 DOI: 10.1002/Anie.201511950  0.38
2015 Zhong D, Jia M, Yang J, Qin Y, Wang D, Pan H, Wang L, Xu J. Determination of Protein Surface Hydration by Systematic Charge Mutations. The Journal of Physical Chemistry Letters. PMID 26636354 DOI: 10.1021/Acs.Jpclett.5B02530  0.779
2015 Gao J, Wang X, Zhang M, Bian M, Deng W, Zuo Z, Yang Z, Zhong D, Lin C. Trp triad-dependent rapid photoreduction is not required for the function of Arabidopsis CRY1. Proceedings of the National Academy of Sciences of the United States of America. PMID 26106155 DOI: 10.1073/Pnas.1504404112  0.314
2015 Tan C, Liu Z, Li J, Guo X, Wang L, Sancar A, Zhong D. The molecular origin of high DNA-repair efficiency by photolyase. Nature Communications. 6: 7302. PMID 26065359 DOI: 10.1038/Ncomms8302  0.668
2015 Liu Z, Wang L, Zhong D. Dynamics and mechanisms of DNA repair by photolyase. Physical Chemistry Chemical Physics : Pccp. 17: 11933-49. PMID 25870862 DOI: 10.1039/C4Cp05286B  0.688
2015 Zhong D. Electron transfer mechanisms of DNA repair by photolyase. Annual Review of Physical Chemistry. 66: 691-715. PMID 25830375 DOI: 10.1146/Annurev-Physchem-040513-103631  0.44
2015 Gao G, Li Y, Wang W, Zhong D, Wang S, Gong Q. Picosecond time-resolved fluorescent spectroscopy of 1-anilino-8-naphthalene sulfonate binding with staphylococcal nuclease in the native and molten globule states. Journal of Photochemistry and Photobiology. B, Biology. 145: 60-5. PMID 25771383 DOI: 10.1016/J.Jphotobiol.2015.02.018  0.34
2015 Guo X, Liu Z, Song Q, Wang L, Zhong D. Dynamics and mechanism of UV-damaged DNA repair in indole-thymine dimer adduct: molecular origin of low repair quantum efficiency. The Journal of Physical Chemistry. B. 119: 3446-55. PMID 25635531 DOI: 10.1021/Jp512413T  0.688
2015 Gao GY, Li Y, Wang W, Zhong DP, Wang SF, Gong QH. Spectroscopic characterization of staphylococcal nuclease mutants with tryptophan at internal sites Chinese Physics Letters. 32. DOI: 10.1088/0256-307X/32/4/048701  0.425
2015 Zhang M, Liu Z, Li J, Wang L, Zhong D. Study of Proton Transfer in Escherichia Coli Photolyase Biophysical Journal. 108: 378a-379a. DOI: 10.1016/J.Bpj.2014.11.2077  0.672
2014 Yang Y, Qin Y, Ding Q, Bakhtina M, Wang L, Tsai MD, Zhong D. Ultrafast water dynamics at the interface of the polymerase-DNA binding complex. Biochemistry. 53: 5405-13. PMID 25105470 DOI: 10.1021/Bi500810A  0.763
2014 Tan C, Guo L, Ai Y, Li J, Wang L, Sancar A, Luo Y, Zhong D. Direct determination of resonance energy transfer in photolyase: structural alignment for the functional state. The Journal of Physical Chemistry. A. 118: 10522-30. PMID 25000823 DOI: 10.1021/Jp504349B  0.365
2014 Liu Z, Tan C, Guo X, Li J, Wang L, Zhong D. Dynamic Determination of Active-Site Reactivity in Semiquinone Photolyase by the Cofactor Photoreduction. The Journal of Physical Chemistry Letters. 5: 820-825. PMID 24803991 DOI: 10.1021/Jz500077S  0.679
2014 Liu Z, Li X, Zhong FW, Li J, Wang L, Shi Y, Zhong D. Quenching Dynamics of Ultraviolet-Light Perception by UVR8 Photoreceptor. The Journal of Physical Chemistry Letters. 5: 69-72. PMID 24490003 DOI: 10.1021/Jz402396K  0.683
2014 Ozturk N, Selby CP, Zhong D, Sancar A. Mechanism of photosignaling by Drosophila cryptochrome: role of the redox status of the flavin chromophore. The Journal of Biological Chemistry. 289: 4634-42. PMID 24379403 DOI: 10.1074/Jbc.M113.542498  0.351
2013 Qin Y, Yang Y, Zhang L, Fowler JD, Qiu W, Wang L, Suo Z, Zhong D. Direct probing of solvent accessibility and mobility at the binding interface of polymerase (Dpo4)-DNA complex. The Journal of Physical Chemistry. A. 117: 13926-34. PMID 24308461 DOI: 10.1021/Jp410051W  0.774
2013 He TF, Guo L, Guo X, Chang CW, Wang L, Zhong D. Femtosecond dynamics of short-range protein electron transfer in flavodoxin. Biochemistry. 52: 9120-8. PMID 24289221 DOI: 10.1021/Bi401137U  0.455
2013 Liu Z, Tan C, Guo X, Li J, Wang L, Sancar A, Zhong D. Determining complete electron flow in the cofactor photoreduction of oxidized photolyase. Proceedings of the National Academy of Sciences of the United States of America. 110: 12966-71. PMID 23882080 DOI: 10.1073/Pnas.1311073110  0.665
2013 Liu Z, Zhang M, Guo X, Tan C, Li J, Wang L, Sancar A, Zhong D. Dynamic determination of the functional state in photolyase and the implication for cryptochrome. Proceedings of the National Academy of Sciences of the United States of America. 110: 12972-7. PMID 23882072 DOI: 10.1073/Pnas.1311077110  0.699
2012 Qin Y, Chang CW, Wang L, Zhong D. Validation of response function construction and probing heterogeneous protein hydration by intrinsic tryptophan. The Journal of Physical Chemistry. B. 116: 13320-30. PMID 23075091 DOI: 10.1021/Jp305118N  0.774
2012 Yang J, Zhang L, Wang L, Zhong D. Femtosecond conical intersection dynamics of tryptophan in proteins and validation of slowdown of hydration layer dynamics. Journal of the American Chemical Society. 134: 16460-3. PMID 22992183 DOI: 10.1021/Ja305283J  0.506
2012 Kao YT, Guo X, Yang Y, Liu Z, Hassanali A, Song QH, Wang L, Zhong D. Ultrafast dynamics of nonequilibrium electron transfer in photoinduced redox cycle: solvent mediation and conformation flexibility. The Journal of Physical Chemistry. B. 116: 9130-40. PMID 22735101 DOI: 10.1021/Jp304518F  0.663
2012 Liu Z, Guo X, Tan C, Li J, Kao YT, Wang L, Sancar A, Zhong D. Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase. Journal of the American Chemical Society. 134: 8104-14. PMID 22533849 DOI: 10.1021/Ja2105009  0.66
2012 Kao YT, Song QH, Saxena C, Wang L, Zhong D. Dynamics and mechanism of DNA repair in a biomimetic system: flavin-thymine dimer adduct. Journal of the American Chemical Society. 134: 1501-3. PMID 22239341 DOI: 10.1021/Ja2112788  0.45
2012 Stevens JA, Link JJ, Zang C, Wang L, Zhong D. Ultrafast dynamics of nonequilibrium resonance energy transfer and probing globular protein flexibility of myoglobin. The Journal of Physical Chemistry. A. 116: 2610-9. PMID 21863851 DOI: 10.1021/Jp206106J  0.805
2011 Li X, Wang Q, Yu X, Liu H, Yang H, Zhao C, Liu X, Tan C, Klejnot J, Zhong D, Lin C. Arabidopsis cryptochrome 2 (CRY2) functions by the photoactivation mechanism distinct from the tryptophan (trp) triad-dependent photoreduction. Proceedings of the National Academy of Sciences of the United States of America. 108: 20844-9. PMID 22139370 DOI: 10.1073/Pnas.1114579108  0.322
2011 Liu Z, Tan C, Guo X, Kao YT, Li J, Wang L, Sancar A, Zhong D. Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase. Proceedings of the National Academy of Sciences of the United States of America. 108: 14831-6. PMID 21804035 DOI: 10.1073/Pnas.1110927108  0.67
2011 Hassanali AA, Zhong D, Singer SJ. An AIMD study of the CPD repair mechanism in water: reaction free energy surface and mechanistic implications. The Journal of Physical Chemistry. B. 115: 3848-59. PMID 21417374 DOI: 10.1021/Jp107722Z  0.423
2011 Hassanali AA, Zhong D, Singer SJ. An AIMD study of CPD repair mechanism in water: role of solvent in ring splitting. The Journal of Physical Chemistry. B. 115: 3860-71. PMID 21417372 DOI: 10.1021/Jp107723W  0.309
2011 Ozturk N, Selby CP, Annayev Y, Zhong D, Sancar A. Reaction mechanism of Drosophila cryptochrome. Proceedings of the National Academy of Sciences of the United States of America. 108: 516-21. PMID 21187431 DOI: 10.1073/Pnas.1017093108  0.326
2011 Zhong D, Pal SK, Zewail AH. Biological water: A critique Chemical Physics Letters. 503: 1-11. DOI: 10.1016/J.Cplett.2010.12.077  0.695
2010 Liu B, Liu H, Zhong D, Lin C. Searching for a photocycle of the cryptochrome photoreceptors. Current Opinion in Plant Biology. 13: 578-86. PMID 20943427 DOI: 10.1016/J.Pbi.2010.09.005  0.356
2010 Chang CW, He TF, Guo L, Stevens JA, Li T, Wang L, Zhong D. Mapping solvation dynamics at the function site of flavodoxin in three redox states. Journal of the American Chemical Society. 132: 12741-7. PMID 20731381 DOI: 10.1021/Ja1050154  0.503
2010 Li J, Liu Z, Tan C, Guo X, Wang L, Sancar A, Zhong D. Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase. Nature. 466: 887-890. PMID 20657578 DOI: 10.1038/Nature09192  0.692
2010 Chang CW, Guo L, Kao YT, Li J, Tan C, Li T, Saxena C, Liu Z, Wang L, Sancar A, Zhong D. Ultrafast solvation dynamics at binding and active sites of photolyases. Proceedings of the National Academy of Sciences of the United States of America. 107: 2914-9. PMID 20133751 DOI: 10.1073/Pnas.1000001107  0.722
2010 Stevens JA, Link JJ, Kao YT, Zang C, Wang L, Zhong D. Ultrafast dynamics of resonance energy transfer in myoglobin: probing local conformation fluctuations. The Journal of Physical Chemistry. B. 114: 1498-505. PMID 20047308 DOI: 10.1021/Jp910013F  0.806
2010 Zhong D. From Femtochemistry to 4D Microscopy Science China Physics, Mechanics and Astronomy. 53: 977-986. DOI: 10.1007/S11433-010-3219-7  0.316
2009 Zhang L, Yang Y, Kao YT, Wang L, Zhong D. Protein hydration dynamics and molecular mechanism of coupled water-protein fluctuations. Journal of the American Chemical Society. 131: 10677-91. PMID 19586028 DOI: 10.1021/Ja902918P  0.464
2009 Zang C, Stevens JA, Link JJ, Guo L, Wang L, Zhong D. Ultrafast proteinquake dynamics in cytochrome c. Journal of the American Chemical Society. 131: 2846-52. PMID 19203189 DOI: 10.1021/Ja8057293  0.806
2009 Hassanali A, Zhong D, Singer S. Molecular Mechanisms in the Repair of the Cyclobutane Dimer Biophysical Journal. 96: 342a. DOI: 10.1016/J.Bpj.2008.12.1717  0.396
2009 Li T, Hassanali AA, Zhong D, Singer SJ. Hydration Dynamics As Revealed By The Fluorescence Stokes Shift: The Origin Of Slow Hydration Dynamics And Breakdown Of Linear Response Biophysical Journal. 96: 302a. DOI: 10.1016/J.Bpj.2008.12.1503  0.525
2009 Zhong D. Hydration dynamics and coupled water-protein fluctuations probed by intrinsic tryptophan Advances in Chemical Physics. 143: 83-149. DOI: 10.1002/9780470508602.ch3  0.347
2008 Oztürk N, Kao YT, Selby CP, Kavakli IH, Partch CL, Zhong D, Sancar A. Purification and characterization of a type III photolyase from Caulobacter crescentus. Biochemistry. 47: 10255-61. PMID 18771290 DOI: 10.1021/Bi801085A  0.337
2008 Kao YT, Saxena C, He TF, Guo L, Wang L, Sancar A, Zhong D. Ultrafast dynamics of flavins in five redox states. Journal of the American Chemical Society. 130: 13132-9. PMID 18767842 DOI: 10.1021/Ja8045469  0.497
2008 Kao YT, Tan C, Song SH, Oztürk N, Li J, Wang L, Sancar A, Zhong D. Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase. Journal of the American Chemical Society. 130: 7695-701. PMID 18500802 DOI: 10.1021/Ja801152H  0.492
2008 Qiu W, Li T, Zhang L, Yang Y, Kao Y, Wang L, Zhong D. Ultrafast quenching of tryptophan fluorescence in proteins: Interresidue and intrahelical electron transfer Chemical Physics. 350: 154-164. DOI: 10.1016/J.Chemphys.2008.01.061  0.492
2007 Oztürk N, Song SH, Ozgür S, Selby CP, Morrison L, Partch C, Zhong D, Sancar A. Structure and function of animal cryptochromes. Cold Spring Harbor Symposia On Quantitative Biology. 72: 119-31. PMID 18419269 DOI: 10.1101/Sqb.2007.72.015  0.349
2007 Zhang L, Wang L, Kao YT, Qiu W, Yang Y, Okobiah O, Zhong D. Mapping hydration dynamics around a protein surface. Proceedings of the National Academy of Sciences of the United States of America. 104: 18461-6. PMID 18003912 DOI: 10.1073/Pnas.0707647104  0.506
2007 Kao YT, Saxena C, Wang L, Sancar A, Zhong D. Femtochemistry in enzyme catalysis: DNA photolyase. Cell Biochemistry and Biophysics. 48: 32-44. PMID 17703066 DOI: 10.1007/S12013-007-0034-5  0.495
2007 Song SH, Oztürk N, Denaro TR, Arat NO, Kao YT, Zhu H, Zhong D, Reppert SM, Sancar A. Formation and function of flavin anion radical in cryptochrome 1 blue-light photoreceptor of monarch butterfly. The Journal of Biological Chemistry. 282: 17608-12. PMID 17459876 DOI: 10.1074/Jbc.M702874200  0.354
2007 Qiu W, Wang L, Lu W, Boechler A, Sanders DA, Zhong D. Dissection of complex protein dynamics in human thioredoxin. Proceedings of the National Academy of Sciences of the United States of America. 104: 5366-71. PMID 17369362 DOI: 10.1073/Pnas.0608498104  0.566
2007 Zhong D. Ultrafast catalytic processes in enzymes. Current Opinion in Chemical Biology. 11: 174-81. PMID 17353141 DOI: 10.1016/J.Cbpa.2007.02.034  0.42
2007 Li T, Hassanali AA, Kao YT, Zhong D, Singer SJ. Hydration dynamics and time scales of coupled water-protein fluctuations. Journal of the American Chemical Society. 129: 3376-82. PMID 17319669 DOI: 10.1021/Ja0685957  0.512
2006 Kim J, Lu W, Qiu W, Wang L, Caffrey M, Zhong D. Ultrafast hydration dynamics in the lipidic cubic phase: Discrete water structures in nanochannels. The Journal of Physical Chemistry. B. 110: 21994-2000. PMID 17064169 DOI: 10.1021/Jp062806C  0.459
2006 Zhang L, Kao YT, Qiu W, Wang L, Zhong D. Femtosecond studies of tryptophan fluorescence dynamics in proteins: local solvation and electronic quenching. The Journal of Physical Chemistry. B. 110: 18097-103. PMID 16970418 DOI: 10.1021/Jp063025E  0.492
2006 Qiu W, Kao YT, Zhang L, Yang Y, Wang L, Stites WE, Zhong D, Zewail AH. Protein surface hydration mapped by site-specific mutations. Proceedings of the National Academy of Sciences of the United States of America. 103: 13979-84. PMID 16968773 DOI: 10.1073/Pnas.0606235103  0.631
2006 Qiu W, Zhang L, Okobiah O, Yang Y, Wang L, Zhong D, Zewail AH. Ultrafast solvation dynamics of human serum albumin: correlations with conformational transitions and site-selected recognition. The Journal of Physical Chemistry. B. 110: 10540-9. PMID 16722765 DOI: 10.1021/Jp055989W  0.605
2006 Hassanali AA, Li T, Zhong D, Singer SJ. A molecular dynamics study of Lys-Trp-Lys: structure and dynamics in solution following photoexcitation. The Journal of Physical Chemistry. B. 110: 10497-508. PMID 16722759 DOI: 10.1021/Jp0601926  0.547
2006 Zhong D. Ultrafast protein dynamics Femtochemistry Vii. 346-356. DOI: 10.1016/B978-044452821-6/50049-6  0.394
2005 Qiu W, Zhang L, Kao YT, Lu W, Li T, Kim J, Sollenberger GM, Wang L, Zhong D. Ultrafast hydration dynamics in melittin folding and aggregation: helix formation and tetramer self-assembly. The Journal of Physical Chemistry. B. 109: 16901-10. PMID 16853151 DOI: 10.1021/Jp0511754  0.437
2005 Wang H, Saxena C, Quan D, Sancar A, Zhong D. Femtosecond dynamics of flavin cofactor in DNA photolyase: radical reduction, local solvation, and charge recombination. The Journal of Physical Chemistry. B. 109: 1329-33. PMID 16851098 DOI: 10.1021/Jp044652B  0.519
2005 Kao YT, Saxena C, Wang L, Sancar A, Zhong D. Direct observation of thymine dimer repair in DNA by photolyase. Proceedings of the National Academy of Sciences of the United States of America. 102: 16128-32. PMID 16169906 DOI: 10.1073/Pnas.0506586102  0.485
2005 Saxena C, Wang H, Kavakli IH, Sancar A, Zhong D. Ultrafast dynamics of resonance energy transfer in cryptochrome. Journal of the American Chemical Society. 127: 7984-5. PMID 15926801 DOI: 10.1021/Ja0421607  0.46
2004 Saxena C, Sancar A, Zhong D. Femtosecond dynamics of DNA photolyase: Energy transfer of antenna initiation and electron transfer of cofactor reduction Journal of Physical Chemistry B. 108: 18026-18033. DOI: 10.1021/Jp048376C  0.45
2004 Lu W, Qiu W, Kim J, Okobiah O, Hu J, Gokel GW, Zhong D. Femtosecond studies of crown ethers: Supramolecular solvation, local solvent structure and cation-π interaction Chemical Physics Letters. 394: 415-422. DOI: 10.1016/J.Cplett.2004.07.032  0.375
2004 Lu W, Kim J, Qiu W, Zhong D. Femtosecond studies of tryptophan solvation: correlation function and water dynamics at lipid surfaces Chemical Physics Letters. 388: 120-126. DOI: 10.1016/J.Cplett.2004.03.012  0.433
2002 Zhong D, Pal SK, Zhang D, Chan SI, Zewail AH. Femtosecond dynamics of rubredoxin: tryptophan solvation and resonance energy transfer in the protein. Proceedings of the National Academy of Sciences of the United States of America. 99: 13-8. PMID 11752400 DOI: 10.1073/Pnas.012582399  0.716
2001 Zhong D, Pal SK, Zewail AH. Femtosecond studies of protein-DNA binding and dynamics: histone I. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 2: 219-27. PMID 23696483 DOI: 10.1002/1439-7641(20010417)2:4<219::Aid-Cphc219>3.0.Co;2-K  0.693
2001 Qu X, Wan C, Becker HC, Zhong D, Zewail AH. The anticancer drug-DNA complex: femtosecond primary dynamics for anthracycline antibiotics function. Proceedings of the National Academy of Sciences of the United States of America. 98: 14212-7. PMID 11724924 DOI: 10.1073/Pnas.241509698  0.503
2001 Zhong D, Pal SK, Wan C, Zewail AH. Femtosecond dynamics of a drug-protein complex: daunomycin with Apo riboflavin-binding protein. Proceedings of the National Academy of Sciences of the United States of America. 98: 11873-8. PMID 11592998 DOI: 10.1073/Pnas.211440298  0.705
2001 Zhong D, Zewail AH. Femtosecond dynamics of flavoproteins: charge separation and recombination in riboflavine (vitamin B2)-binding protein and in glucose oxidase enzyme. Proceedings of the National Academy of Sciences of the United States of America. 98: 11867-72. PMID 11592997 DOI: 10.1073/Pnas.211440398  0.599
2000 Zhong D, Douhal A, Zewail AH. Femtosecond studies of protein-ligand hydrophobic binding and dynamics: human serum albumin. Proceedings of the National Academy of Sciences of the United States of America. 97: 14056-61. PMID 11106379 DOI: 10.1073/Pnas.250491297  0.59
1999 Zhong D, Zewail AH. Femtosecond dynamics of dative bonding: concepts of reversible and dissociative electron transfer reactions. Proceedings of the National Academy of Sciences of the United States of America. 96: 2602-7. PMID 10077556 DOI: 10.1073/Pnas.96.6.2602  0.576
1999 Zhong D, Zewail AH. Femtosecond dynamics of dative bonding: Concepts of reversible and dissociative electron transfer reactions Proceedings of the National Academy of Sciences of the United States of America. 96: 2602-2607. DOI: 10.1073/pnas.96.6.2602  0.52
1999 Zhong D, Bernhardt TM, Zewail AH. Femtosecond Real-Time Probing of Reactions. 24. Time, Velocity, and Orientation Mapping of the Dynamics of Dative Bonding in Bimolecular Electron Transfer Reactions† The Journal of Physical Chemistry A. 103: 10093-10117. DOI: 10.1021/Jp9919359  0.594
1998 Zhong D, Zewail AH. Femtosecond Real-Time Probing of Reactions. 23. Studies of Temporal, Velocity, Angular, and State Dynamics from Transition States to Final Products by Femtosecond-Resolved Mass Spectrometry The Journal of Physical Chemistry A. 102: 4031-4058. DOI: 10.1021/Jp9805196  0.583
1998 Zhong D, Diau EWG, Bernhardt TM, De Feyter S, Roberts JD, Zewail AH. Femtosecond dynamics of valence-bond isomers of azines: Transition states and conical intersections Chemical Physics Letters. 298: 129-140. DOI: 10.1016/S0009-2614(98)01160-9  0.441
1997 Zhong D, Ahmad S, Zewail AH. Femtosecond Elimination Reaction Dynamics Journal of the American Chemical Society. 119: 5978-5979. DOI: 10.1021/Ja9710013  0.549
1997 Zhong D, Ahmad S, Cheng PY, Zewail AH. Femtosecond Nucleophilic Substitution Reaction Dynamics Journal of the American Chemical Society. 119: 2305-2306. DOI: 10.1021/Ja963879K  0.504
1996 Zhong D, Cheng PY, Zewail AH. Bimolecular reactions observed by femtosecond detachment to aligned transition states: Inelastic and reactive dynamics The Journal of Chemical Physics. 105: 7864-7867. DOI: 10.1063/1.472606  0.586
1996 Cheng PY, Zhong D, Zewail AH. Femtosecond real‐time probing of reactions. XXI. Direct observation of transition‐state dynamics and structure in charge‐transfer reactions The Journal of Chemical Physics. 105: 6216-6248. DOI: 10.1063/1.472478  0.576
1995 Cheng PY, Zhong D, Zewail AH. Transition states of charge‐transfer reactions: Femtosecond dynamics and the concept of harpooning in the bimolecular reaction of benzene with iodine The Journal of Chemical Physics. 103: 5153-5156. DOI: 10.1063/1.470603  0.39
1995 Cheng PY, Zhong D, Zewail AH. Femtosecond Velocity-Gating of Complex Structures in Solvent Cages The Journal of Physical Chemistry. 99: 15733-15737. DOI: 10.1021/J100043A009  0.485
1995 Cheng P, Zhong D, Zewail A. Microscopic solvation and femtochemistry of charge-transfer reactions: the problem of benzene(s)-iodine binary complexes and their solvent structures Chemical Physics Letters. 242: 369-379. DOI: 10.1016/0009-2614(95)00780-8  0.611
1995 Cheng P, Zhong D, Zewail AH. Kinetic-energy, femtosecond resolved reaction dynamics. Modes of dissociation (in iodobenzene) from time-velocity correlations Chemical Physics Letters. 237: 399-405. DOI: 10.1016/0009-2614(95)00364-A  0.551
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