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David (Dave) C. Tank - Publications

Affiliations: 
University of Wyoming, Laramie, WY, United States 
 University of Idaho, Moscow, ID, United States 
Area:
botany, phylogenetics
Website:
http://davetank.github.io/tank-lab/
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62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Medina N, Tank DC, Espíndola A. Calceolariaceae809: A bait set for targeted sequencing of nuclear loci. Applications in Plant Sciences. 11: e11557. PMID 38106533 DOI: 10.1002/aps3.11557  0.796
2023 Duckett DJ, Calder K, Sullivan J, Tank DC, Carstens BC. Reduced representation approaches produce similar results to whole genome sequencing for some common phylogeographic analyses. Plos One. 18: e0291941. PMID 38032899 DOI: 10.1371/journal.pone.0291941  0.618
2022 Smith ML, Wallace J, Tank DC, Sullivan J, Carstens BC. The role of multiple Pleistocene refugia in promoting diversification in the Pacific Northwest. Molecular Ecology. PMID 35780485 DOI: 10.1111/mec.16595  0.619
2022 Morales-Briones DF, Lin N, Huang EY, Grossenbacher DL, Sobel JM, Gilmore CD, Tank DC, Yang Y. Phylogenomic analyses in Phrymaceae reveal extensive gene tree discordance in relationships among major clades. American Journal of Botany. PMID 35462411 DOI: 10.1002/ajb2.1860  0.809
2022 Ruffley M, Smith ML, Espíndola A, Turck DF, Mitchell N, Carstens B, Sullivan J, Tank DC. Genomic evidence of an ancient Inland Temperate Rainforest in the Pacific Northwest of North America. Molecular Ecology. PMID 35322900 DOI: 10.1111/mec.16431  0.804
2021 Frost LA, O'Leary N, Lagomarsino LP, Tank DC, Olmstead RG. Phylogeny, classification, and character evolution of tribe Citharexyleae (Verbenaceae). American Journal of Botany. 108: 1982-2001. PMID 34669193 DOI: 10.1002/ajb2.1750  0.564
2021 Marx HE, Carboni M, Douzet R, Perrier C, Delbart F, Thuiller W, Lavergne S, Tank DC. Can functional genomic diversity provide novel insights into mechanisms of community assembly? A pilot study from an invaded alpine streambed. Ecology and Evolution. 11: 12075-12091. PMID 34522362 DOI: 10.1002/ece3.7973  0.786
2021 Morales-Briones DF, Gehrke B, Huang CH, Liston A, Ma H, Marx HE, Tank DC, Yang Y. Analysis of paralogs in target enrichment data pinpoints multiple ancient polyploidy events in Alchemilla s.l. (Rosaceae). Systematic Biology. PMID 33978764 DOI: 10.1093/sysbio/syab032  0.803
2020 Goldberg AR, Conway CJ, Tank DC, Andrews KR, Gour DS, Waits LP. Diet of a rare herbivore based on DNA metabarcoding of feces: Selection, seasonality, and survival. Ecology and Evolution. 10: 7627-7643. PMID 32760553 DOI: 10.1002/Ece3.6488  0.358
2019 Ruffley M, Peterson K, Week B, Tank DC, Harmon LJ. Identifying models of trait-mediated community assembly using random forests and approximate Bayesian computation. Ecology and Evolution. 9: 13218-13230. PMID 31871640 DOI: 10.1002/Ece3.5773  0.793
2019 Morales-Briones DF, Arias T, Di Stilio VS, Tank DC. Chloroplast primers for clade-wide phylogenetic studies of . Applications in Plant Sciences. 7: e11294. PMID 31667022 DOI: 10.1002/Aps3.11294  0.794
2019 Morales-Briones DF, Romoleroux K, Tank DC. Three new species of (Rosaceae) from South America. Phytokeys. 127: 93-119. PMID 31379452 DOI: 10.3897/Phytokeys.127.36324  0.789
2019 Marx HE, Richards M, Johnson GM, Tank DC. Increasing phylogenetic stochasticity at high elevations on summits across a remote North American wilderness. American Journal of Botany. PMID 31291472 DOI: 10.1002/Ajb2.1328  0.748
2019 Jacobs SJ, Herzog S, Tank DC. Quantifying morphological variation in the species complex (Orobanchaceae). Peerj. 7: e7090. PMID 31259097 DOI: 10.7717/Peerj.7090  0.768
2019 Martine CT, Jordon-Thaden IE, McDonnell AJ, Cantley JT, Hayes DS, Roche MD, Frawley ES, Gilman IS, Tank DC. Phylogeny of the Australian Solanum dioicum group using seven nuclear genes, with consideration of Symon's fruit and seed dispersal hypotheses. Plos One. 14: e0207564. PMID 30998778 DOI: 10.1371/Journal.Pone.0207564  0.432
2019 Morales-Briones DF, Tank DC. Extensive allopolyploidy in the neotropical genus Lachemilla (Rosaceae) revealed by PCR-based target enrichment of the nuclear ribosomal DNA cistron and plastid phylogenomics. American Journal of Botany. 106: 415-437. PMID 30882906 DOI: 10.1002/Ajb2.1253  0.792
2019 Sullivan J, Smith ML, Espíndola A, Ruffley M, Rankin A, Tank D, Carstens B. Integrating life history traits into predictive phylogeography. Molecular Ecology. PMID 30667113 DOI: 10.1111/Mec.15029  0.777
2019 Nesom G, Fraga NS, Barker WR, Beardsley PM, Tank D, Baldwin B, Olmstead R. Response to “The case for the continued use of the genus name Mimulus for all monkeyflowers” Taxon. 68: 624-627. DOI: 10.1002/Tax.12124  0.473
2018 Pelletier TA, Carstens BC, Tank DC, Sullivan J, Espíndola A. Predicting plant conservation priorities on a global scale. Proceedings of the National Academy of Sciences of the United States of America. 115: 13027-13032. PMID 30509998 DOI: 10.1073/Pnas.1804098115  0.804
2018 Blischak PD, Latvis M, Morales-Briones DF, Johnson JC, Di Stilio VS, Wolfe AD, Tank DC. Fluidigm2PURC: Automated processing and haplotype inference for double-barcoded PCR amplicons. Applications in Plant Sciences. 6: e01156. PMID 30131898 DOI: 10.1002/Aps3.1156  0.784
2018 Landis JB, Soltis DE, Li Z, Marx HE, Barker MS, Tank DC, Soltis PS. Impact of whole-genome duplication events on diversification rates in angiosperms. American Journal of Botany. PMID 29719043 DOI: 10.1002/Ajb2.1060  0.787
2018 Jacobs SJ, Kristoferson C, Uribe-Convers S, Latvis M, Tank DC. Incongruence in molecular species delimitation schemes: what to do when adding more data is difficult. Molecular Ecology. PMID 29701315 DOI: 10.1111/Mec.14590  0.797
2018 Morales-Briones DF, Liston A, Tank DC. Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae). The New Phytologist. PMID 29604235 DOI: 10.1111/Nph.15099  0.832
2018 Ruffley M, Smith ML, Espíndola A, Carstens BC, Sullivan J, Tank DC. Combining allele frequency and tree-based approaches improves phylogeographic inference from natural history collections. Molecular Ecology. PMID 29334417 DOI: 10.1111/Mec.14491  0.797
2018 Gilman IS, Tank DC. Species Tree Estimation using ddRADseq Data from Historical Specimens Confirms the Monophyly of Highly Disjunct Species of Chloropyron (Orobanchaceae) Systematic Botany. 43: 701-708. DOI: 10.1600/036364418X697418  0.477
2018 Morales-Briones DF, Romoleroux K, Kolář F, Tank DC. Phylogeny and Evolution of the Neotropical Radiation of Lachemilla (Rosaceae): Uncovering a History of Reticulate Evolution and Implications for Infrageneric Classification Systematic Botany. 43: 17-34. DOI: 10.1600/036364418X696897  0.796
2018 Smith ML, Ruffley M, Rankin AM, Espíndola A, Tank DC, Sullivan J, Carstens BC. Testing for the presence of cryptic diversity in tail-dropper slugs (Prophysaon) using molecular data Biological Journal of the Linnean Society. 124: 518-532. DOI: 10.1093/Biolinnean/Bly067  0.619
2017 Marx HE, Dentant C, Renaud J, Delunel R, Tank DC, Lavergne S. Riders in the sky (islands): using a mega-phylogenetic approach to understand plant species distribution and coexistence at the altitudinal limits of angiosperm plant life. Journal of Biogeography. 44: 2618-2630. PMID 29249850 DOI: 10.1111/Jbi.13073  0.768
2017 Latvis M, Jacobs SJ, Mortimer SME, Richards M, Blischak PD, Mathews S, Tank DC. Primers for Castilleja and their utility across Orobanchaceae: II. Single-copy nuclear loci. Applications in Plant Sciences. 5. PMID 28989822 DOI: 10.3732/Apps.1700038  0.77
2017 Latvis M, Mortimer SME, Morales-Briones DF, Torpey S, Uribe-Convers S, Jacobs SJ, Mathews S, Tank DC. Primers for Castilleja and their utility across Orobanchaceae: I. Chloroplast primers. Applications in Plant Sciences. 5. PMID 28989821 DOI: 10.3732/Apps.1700020  0.763
2017 Smith ML, Ruffley M, Espíndola A, Tank DC, Sullivan J, Carstens BC. Demographic Model Selection using Random Forests and the Site Frequency Spectrum. Molecular Ecology. PMID 28665011 DOI: 10.1111/Mec.14223  0.777
2016 Espíndola A, Ruffley M, Smith ML, Carstens BC, Tank DC, Sullivan J. Identifying cryptic diversity with predictive phylogeography. Proceedings. Biological Sciences. 283. PMID 27798300 DOI: 10.1098/Rspb.2016.1529  0.808
2016 Uribe-Convers S, Settles ML, Tank DC. A Phylogenomic Approach Based on PCR Target Enrichment and High Throughput Sequencing: Resolving the Diversity within the South American Species of Bartsia L. (Orobanchaceae). Plos One. 11: e0148203. PMID 26828929 DOI: 10.1371/Journal.Pone.0148203  0.789
2016 Uribe-Convers S, Tank DC. Phylogenetic Revision of the Genus Bartsia (Orobanchaceae): Disjunct Distributions Correlate to Independent Lineages Systematic Botany. 41: 672-684. DOI: 10.1600/036364416X692299  0.796
2015 Uribe-Convers S, Tank DC. Shifts in diversification rates linked to biogeographic movement into new areas: An example of a recent radiation in the Andes. American Journal of Botany. 102: 1854-69. PMID 26542843 DOI: 10.3732/Ajb.1500229  0.787
2015 Tank DC, Eastman JM, Pennell MW, Soltis PS, Soltis DE, Hinchliff CE, Brown JW, Sessa EB, Harmon LJ. Nested radiations and the pulse of angiosperm diversification: increased diversification rates often follow whole genome duplications. The New Phytologist. 207: 454-67. PMID 26053261 DOI: 10.1111/Nph.13491  0.779
2015 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, et al. Zanne et al. reply. Nature. 521: E6-7. PMID 25993971 DOI: 10.1038/Nature14394  0.737
2015 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, et al. Corrigendum: Three keys to the radiation of angiosperms into freezing environments. Nature. 521: 380. PMID 25993966 DOI: 10.1038/Nature14371  0.755
2015 Nürk NM, Uribe-Convers S, Gehrke B, Tank DC, Blattner FR. Oligocene niche shift, Miocene diversification - cold tolerance and accelerated speciation rates in the St. John's Worts (Hypericum, Hypericaceae). Bmc Evolutionary Biology. 15: 80. PMID 25944090 DOI: 10.1186/S12862-015-0359-4  0.808
2015 Nürk NM, Uribe-Convers S, Gehrke B, Tank DC, Blattner FR. Oligocene niche shift, Miocene diversification - cold tolerance and accelerated speciation rates in the St. John's Worts (Hypericum, Hypericaceae) Bmc Evolutionary Biology. 1-13. DOI: 10.1186/s12862-015-0359-4  0.739
2015 Marx HE, Giblin DE, Dunwiddie PW, Tank DC. Deconstructing Darwin's Naturalization Conundrum in the San Juan Islands using community phylogenetics and functional traits Diversity and Distributions. DOI: 10.1111/Ddi.12401  0.755
2014 Uribe-Convers S, Duke JR, Moore MJ, Tank DC. A long PCR-based approach for DNA enrichment prior to next-generation sequencing for systematic studies. Applications in Plant Sciences. 2. PMID 25202592 DOI: 10.3732/Apps.1300063  0.791
2014 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O'Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, et al. Three keys to the radiation of angiosperms into freezing environments. Nature. 506: 89-92. PMID 24362564 DOI: 10.1038/Nature12872  0.81
2014 Fitzjohn RG, Pennell MW, Zanne AE, Stevens PF, Tank DC, Cornwell WK. How much of the world is woody? Journal of Ecology. 102: 1266-1272. DOI: 10.1111/1365-2745.12260  0.451
2014 Cornwell WK, Westoby M, Falster DS, Fitzjohn RG, O'Meara BC, Pennell MW, McGlinn DJ, Eastman JM, Moles AT, Reich PB, Tank DC, Wright IJ, Aarssen L, Beaulieu JM, Kooyman RM, et al. Functional distinctiveness of major plant lineages Journal of Ecology. 102: 345-356. DOI: 10.1111/1365-2745.12208  0.799
2014 Zanne AE, Tank DC, Cornwell WK, Eastman JM, Smith SA, FitzJohn RG, McGlinn DJ, O’Meara BC, Moles AT, Reich PB, Royer DL, Soltis DE, Stevens PF, Westoby M, Wright IJ, et al. Erratum: Corrigendum: Three keys to the radiation of angiosperms into freezing environments Nature. 514: 394-394. DOI: 10.1038/Nature13842  0.689
2013 Fant JB, Weinberg-Wolf H, Tank DC, Skogen KA. Characterization of microsatellite loci in Castilleja sessiliflora and transferability to 24 Castilleja species (Orobanchaceae). Applications in Plant Sciences. 1. PMID 25202558 DOI: 10.3732/Apps.1200564  0.37
2013 Carstens BC, Brennan RS, Chua V, Duffie CV, Harvey MG, Koch RA, McMahan CD, Nelson BJ, Newman CE, Satler JD, Seeholzer G, Posbic K, Tank DC, Sullivan J. Model selection as a tool for phylogeographic inference: an example from the willow Salix melanopsis. Molecular Ecology. 22: 4014-28. PMID 23848064 DOI: 10.1111/Mec.12347  0.653
2013 Beaulieu JM, Tank DC, Donoghue MJ. A Southern Hemisphere origin for campanulid angiosperms, with traces of the break-up of Gondwana. Bmc Evolutionary Biology. 13: 80. PMID 23565668 DOI: 10.1186/1471-2148-13-80  0.703
2013 Eastman JM, Harmon LJ, Tank DC. Congruification: Support for time scaling large phylogenetic trees Methods in Ecology and Evolution. 4: 688-691. DOI: 10.1111/2041-210X.12051  0.705
2012 Clay DL, Novak SJ, Serpe MD, Tank DC, Smith JF. Homoploid hybrid speciation in a rare endemic Castilleja from Idaho (Castilleja christii, Orobanchaceae). American Journal of Botany. 99: 1976-90. PMID 23211568 DOI: 10.3732/Ajb.1200326  0.344
2012 Goldberg CS, Tank DC, Uribe-Convers S, Bosworth WR, Marx HE, Waits LP. Species designation of the Bruneau Dune tiger beetle (Cicindela waynei) is supported by phylogenetic analysis of mitochondrial DNA sequence data Conservation Genetics. 13: 373-380. DOI: 10.1007/S10592-011-0295-9  0.81
2011 Soltis DE, Smith SA, Cellinese N, Wurdack KJ, Tank DC, Brockington SF, Refulio-Rodriguez NF, Walker JB, Moore MJ, Carlsward BS, Bell CD, Latvis M, Crawley S, Black C, Diouf D, et al. Angiosperm phylogeny: 17 genes, 640 taxa. American Journal of Botany. 98: 704-30. PMID 21613169 DOI: 10.3732/Ajb.1000404  0.802
2010 Marx HE, O'Leary N, Yuan YW, Lu-Irving P, Tank DC, Múlgura ME, Olmstead RG. A molecular phylogeny and classification of Verbenaceae. American Journal of Botany. 97: 1647-63. PMID 21616800 DOI: 10.3732/Ajb.1000144  0.816
2010 Tank DC, Donoghue MJ. Phylogeny and Phylogenetic Nomenclature of the Campanulidae Based on an Expanded Sample of Genes and Taxa Systematic Botany. 35: 425-441. DOI: 10.1600/036364410791638306  0.601
2009 Tank DC, Olmstead RG. The evolutionary origin of a second radiation of annual Castilleja (Orobanchaceae) species in South America: The role of long distance dispersal and allopolyploidy. American Journal of Botany. 96: 1907-21. PMID 21622312 DOI: 10.3732/Ajb.0800416  0.623
2009 Tank DC, Egger JM, Olmstead RG. Phylogenetic classification of subtribe castillejinae (orobanchaceae) Systematic Botany. 34: 182-197. DOI: 10.1600/036364409787602357  0.6
2008 Tank DC, Olmstead RG. From annuals to perennials: phylogeny of subtribe Castillejinae (Orobanchaceae). American Journal of Botany. 95: 608-25. PMID 21632387 DOI: 10.3732/Ajb.2007346  0.627
2008 Smith SA, Tank DC, Boulanger LA, Bascom-Slack CA, Eisenman K, Kingery D, Babbs B, Fenn K, Greene JS, Hann BD, Keehner J, Kelley-Swift EG, Kembaiyan V, Lee SJ, Li P, et al. Bioactive endophytes warrant intensified exploration and conservation. Plos One. 3: e3052. PMID 18725962 DOI: 10.1371/Journal.Pone.0003052  0.654
2006 Tank DC, Beardsley PM, Kelchner SA, Olmstead RG. Review of the systematics of Scrophulariaceae s.l. and their current disposition Australian Systematic Botany. 19: 289-307. DOI: 10.1071/Sb05009  0.694
2001 Tank DC, Sang T. Phylogenetic utility of the glycerol-3-phosphate acyltransferase gene: evolution and implications in Paeonia (Paeoniaceae). Molecular Phylogenetics and Evolution. 19: 421-9. PMID 11399150 DOI: 10.1006/Mpev.2001.0931  0.379
2000 Wang XQ, Tank DC, Sang T. Phylogeny and divergence times in Pinaceae: evidence from three genomes. Molecular Biology and Evolution. 17: 773-81. PMID 10779538 DOI: 10.1093/Oxfordjournals.Molbev.A026356  0.398
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