| Year |
Citation |
Score |
| 2024 |
Luan T, Commichaux S, Hoffmann M, Jayeola V, Jang JH, Pop M, Rand H, Luo Y. Benchmarking short and long read polishing tools for nanopore assemblies: achieving near-perfect genomes for outbreak isolates. Bmc Genomics. 25: 679. PMID 38978005 DOI: 10.1186/s12864-024-10582-x |
0.378 |
|
| 2024 |
Timme RE, Woods J, Jones JL, Calci KR, Rodriguez R, Barnes C, Leard E, Craven M, Chen H, Boerner C, Grim C, Windsor AM, Ramachandran P, Muruvanda T, Rand H, ... ... Hoffmann M, et al. SARS-CoV-2 wastewater variant surveillance: pandemic response leveraging FDA's GenomeTrakr network. Msystems. e0141523. PMID 38819130 DOI: 10.1128/msystems.01415-23 |
0.549 |
|
| 2024 |
Han J, Aljahdali N, Zhao S, Tang H, Harbottle H, Hoffmann M, Frye JG, Foley SL. Infection biology of . Ecosal Plus. eesp00012023. PMID 38415623 DOI: 10.1128/ecosalplus.esp-0001-2023 |
0.34 |
|
| 2023 |
Kristensen T, Sørensen LH, Pedersen SK, Jensen JD, Mordhorst H, Lacy-Roberts N, Lukjancenko O, Luo Y, Hoffmann M, Hendriksen RS. Results of the 2020 Genomic Proficiency Test for the network of European Union Reference Laboratory for Antimicrobial Resistance assessing whole-genome-sequencing capacities. Microbial Genomics. 9. PMID 37526643 DOI: 10.1099/mgen.0.001076 |
0.434 |
|
| 2023 |
Worley JN, Crothers JW, Wolfgang WJ, Venkata SLG, Hoffmann M, Jayeola V, Klompas M, Allard M, Bry L. Prospective Genomic Surveillance Reveals Cryptic MRSA Outbreaks with Local to International Origins among NICU Patients. Journal of Clinical Microbiology. e0001423. PMID 37022157 DOI: 10.1128/jcm.00014-23 |
0.382 |
|
| 2023 |
Commichaux S, Rand H, Javkar K, Molloy EK, Pettengill JB, Pightling A, Hoffmann M, Pop M, Jayeola V, Foley S, Luo Y. Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation. Bmc Genomics. 24: 165. PMID 37016310 DOI: 10.1186/s12864-023-09245-0 |
0.511 |
|
| 2022 |
Hammad AM, Gonzalez-Escalona N, El Tahan A, Abbas NH, Koenig SSK, Allué-Guardia A, Eppinger M, Hoffmann M. Pathogenome comparison and global phylogeny of Escherichia coli ST1485 strains. Scientific Reports. 12: 18495. PMID 36323726 DOI: 10.1038/s41598-022-20342-0 |
0.419 |
|
| 2022 |
Davies CP, Jurkiw T, Haendiges J, Reed E, Anderson N, Grasso-Kelley E, Hoffmann M, Zheng J. Changes in the genomes and methylomes of three serovars after long-term storage in ground black pepper. Frontiers in Microbiology. 13: 970135. PMID 36160197 DOI: 10.3389/fmicb.2022.970135 |
0.337 |
|
| 2022 |
Weiss ZF, Hoffmann M, Seetharaman S, Taffner S, Allerd M, Luo Y, Pearson Z, Baker MA, Klompas M, Bry L, Pecora N. Nosocomial Pluralibacter gergoviae Isolates Expressing NDM and KPC Carbapenemases Characterized Using Whole-Genome Sequencing. Antimicrobial Agents and Chemotherapy. e0109322. PMID 36121219 DOI: 10.1128/aac.01093-22 |
0.487 |
|
| 2022 |
Jurkiw T, Haendiges J, Luo Y, Bell R, Hoffmann M, Zheng J. Closed Genome Sequences of Serovar Javiana Isolates from Various Sources. Microbiology Resource Announcements. e0022322. PMID 35727015 DOI: 10.1128/mra.00223-22 |
0.511 |
|
| 2022 |
Negrete FJ, Ko K, Jang H, Hoffmann M, Lehner A, Stephan R, Fanning S, Tall BD, Gopinath GR. Complete genome sequences and genomic characterization of five plasmids harbored by environmentally persistent Cronobacter sakazakii strains ST83 H322 and ST64 GK1025B obtained from powdered infant formula manufacturing facilities. Gut Pathogens. 14: 23. PMID 35668537 DOI: 10.1186/s13099-022-00500-5 |
0.378 |
|
| 2022 |
Stevens EL, Carleton HA, Beal J, Tillman GE, Lindsey RL, Lauer AC, Pightling A, Jarvis KG, Ottesen A, Ramachandran P, Hintz L, Katz LS, Folster JP, Whichard JM, Trees E, ... ... Hoffmann M, et al. The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States. Journal of Food Protection. PMID 35259246 DOI: 10.4315/JFP-21-437 |
0.585 |
|
| 2022 |
Trinetta V, Mendez EA, Hoffmann M, Zheng J. Whole-Genome Sequences of Two Listeria monocytogenes Biofilm Formers. Microbiology Resource Announcements. e0106221. PMID 35254124 DOI: 10.1128/mra.01062-21 |
0.473 |
|
| 2021 |
Haendiges J, Davidson GR, Pettengill JB, Reed E, Ramachandran P, Blessington T, Miller JD, Anderson N, Myoda S, Brown EW, Zheng J, Tikekar R, Hoffmann M. Genomic evidence of environmental and resident Salmonella Senftenberg and Montevideo contamination in the pistachio supply-chain. Plos One. 16: e0259471. PMID 34735518 DOI: 10.1371/journal.pone.0259471 |
0.635 |
|
| 2021 |
Javkar K, Rand H, Hoffmann M, Luo Y, Sarria S, Thirunavukkarasu N, Pillai CA, McGann P, Johnson JK, Strain E, Pop M. Whole-Genome Assessment of Clinical Isolates Uncovers Potentially Novel Factors Influencing Carbapenem Resistance. Frontiers in Microbiology. 12: 714284. PMID 34659144 DOI: 10.3389/fmicb.2021.714284 |
0.413 |
|
| 2021 |
Yao K, González-Escalona N, Hoffmann M. Multiple Displacement Amplification as a Solution for Low Copy Number Plasmid Sequencing. Frontiers in Microbiology. 12: 617487. PMID 33643244 DOI: 10.3389/fmicb.2021.617487 |
0.427 |
|
| 2021 |
Worley JN, Javkar K, Hoffmann M, Hysell K, Garcia-Williams A, Tagg K, Kanjilal S, Strain E, Pop M, Allard M, Francois Watkins L, Bry L. Genomic Drivers of Multidrug-Resistant Affecting Vulnerable Patient Populations in the United States and Abroad. Mbio. 12. PMID 33500335 DOI: 10.1128/mBio.03188-20 |
0.427 |
|
| 2020 |
Timme RE, Lafon PC, Balkey M, Adams JK, Wagner D, Carleton H, Strain E, Hoffmann M, Sabol A, Rand H, Lindsey R, Sheehan D, Baugher JD, Trees E. Gen-FS coordinated proficiency test data for genomic foodborne pathogen surveillance, 2017 and 2018 exercises. Scientific Data. 7: 402. PMID 33214563 DOI: 10.1038/s41597-020-00740-7 |
0.317 |
|
| 2020 |
Yang H, Hoffmann M, Allard MW, Brown EW, Chen Y. Microevolution and Gain or Loss of Mobile Genetic Elements of Outbreak-Related in Food Processing Environments Identified by Whole Genome Sequencing Analysis. Frontiers in Microbiology. 11: 866. PMID 32547499 DOI: 10.3389/fmicb.2020.00866 |
0.659 |
|
| 2020 |
Hoffmann M, Miller J, Melka D, Allard MW, Brown EW, Pettengill JB. Temporal Dynamics of subsp. Serovar Agona Isolates From a Recurrent Multistate Outbreak. Frontiers in Microbiology. 11: 478. PMID 32265893 DOI: 10.3389/fmicb.2020.00478 |
0.661 |
|
| 2020 |
Hurley D, Hoffmann M, Muruvanda T, Allard MW, Brown EW, Martins M, Fanning S. Atypical serovars in murine and human macrophage infection models. Infection and Immunity. PMID 32014897 DOI: 10.1128/IAI.00353-19 |
0.482 |
|
| 2020 |
Rauch HE, Haendiges J, Balkey M, Hoffmann M. Five Closed Genome Sequences from a 2017-2018 Multistrain, Multistate Kratom Outbreak. Microbiology Resource Announcements. 9. PMID 31948965 DOI: 10.1128/MRA.01395-19 |
0.442 |
|
| 2019 |
Miller D, Yao K, Whitney B, Sanchez Leon M, Tallent S, Hoffmann M. Complete Genome Sequences of Two Salmonella enterica subsp. Serovar Anatum Strains Isolated from Papaya. Microbiology Resource Announcements. 8. PMID 31806740 DOI: 10.1128/MRA.01071-19 |
0.564 |
|
| 2019 |
Haendiges J, Gonzalez-Escalona N, Miller JD, Hoffmann M. Complete Genome Sequences of Four Salmonella enterica Strains Associated with Pistachios Assembled Using a Combination of Short- and Long-Read Sequencing. Microbiology Resource Announcements. 8. PMID 31537673 DOI: 10.1128/MRA.00975-19 |
0.504 |
|
| 2019 |
González-Escalona N, Allard MA, Brown EW, Sharma S, Hoffmann M. Nanopore sequencing for fast determination of plasmids, phages, virulence markers, and antimicrobial resistance genes in Shiga toxin-producing Escherichia coli. Plos One. 14: e0220494. PMID 31361781 DOI: 10.1371/journal.pone.0220494 |
0.65 |
|
| 2019 |
Mormile MR, Edwards T, Frank R, Geurin Z, Haendiges J, Hoffmann M, Miller J. Whole-Genome Analysis of Halomonas sp. Soap Lake #7, Reveals It Possesses Putative Mrp Antiporter Operon Groups 1 and 2. Genome Biology and Evolution. PMID 31214690 DOI: 10.1093/Gbe/Evz117 |
0.342 |
|
| 2019 |
Hsu CH, Li C, Hoffmann M, McDermott P, Abbott J, Ayers S, Tyson GH, Tate H, Yao K, Allard M, Zhao S. Comparative Genomic Analysis of Virulence, Antimicrobial Resistance, and Plasmid Profiles of Dublin Isolated from Sick Cattle, Retail Beef, and Humans in the United States. Microbial Drug Resistance (Larchmont, N.Y.). PMID 31149890 DOI: 10.1089/mdr.2019.0045 |
0.494 |
|
| 2019 |
Hammad AM, Hoffmann M, Gonzalez-Escalona N, Abbas NH, Yao K, Koenig S, Allué-Guardia A, Eppinger M. Genomic features of colistin resistant Escherichia coli ST69 strain harboring mcr-1 on IncHI2 plasmid from raw milk cheese in Egypt. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 31029792 DOI: 10.1016/j.meegid.2019.04.021 |
0.4 |
|
| 2019 |
Guard J, Cao G, Luo Y, Baugher JD, Davison S, Yao K, Hoffmann M, Zhang G, Likens N, Bell R, Zheng J, Brown E, Allard M. Genome sequence analysis of 91 Salmonella Enteritidis isolates from mice caught on poultry farms in the mid 1990s. Genomics. PMID 30974149 DOI: 10.1016/J.Ygeno.2019.04.005 |
0.56 |
|
| 2019 |
Haendiges J, Keller S, Suehr Q, Anderson N, Reed E, Zheng J, Miller JD, Hoffmann M. Erratum for Haendiges et al., "Complete Genome Sequences of Five Salmonella enterica Strains Used in Inoculation Cocktails in Low-Moisture Food Storage Studies". Microbiology Resource Announcements. 8. PMID 30834383 DOI: 10.1128/MRA.00126-19 |
0.371 |
|
| 2019 |
Keefer AB, Xiaoli L, M'ikanatha NM, Yao K, Hoffmann M, Dudley EG. Retrospective whole-genome sequencing analysis distinguished PFGE and drug-resistance-matched retail meat and clinical Salmonella isolates. Microbiology (Reading, England). PMID 30672732 DOI: 10.1099/Mic.0.000768 |
0.441 |
|
| 2019 |
Haendiges J, Keller S, Suehr Q, Anderson N, Reed E, Zheng J, Miller JD, Hoffmann M. Complete Genome Sequences of Five Salmonella enterica Strains Used in Inoculation Cocktails in Low-Moisture Food Storage Studies. Microbiology Resource Announcements. 8. PMID 30643905 DOI: 10.1128/MRA.01588-18 |
0.485 |
|
| 2018 |
González-Escalona N, Yao K, Hoffmann M. Closed Genome Sequence of Salmonella enterica Serovar Richmond Strain CFSAN000191, Obtained with Nanopore Sequencing. Microbiology Resource Announcements. 7. PMID 30574589 DOI: 10.1128/MRA.01472-18 |
0.551 |
|
| 2018 |
Haendiges J, Yao K, Miller JD, Hoffmann M. First Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Worthington Strain CFSAN051295, Isolated from Pistachio. Microbiology Resource Announcements. 7. PMID 30533820 DOI: 10.1128/MRA.01407-18 |
0.546 |
|
| 2018 |
Hoffmann M, Yao K, Allard M, Sanchez M, Andersen LP, Hasman H, Hammerum AM. Complete Genome Sequence of a Vancomycin-Resistant Sequence Type 203 Enterococcus faecium Strain with Belonging to Complex Type 859. Microbiology Resource Announcements. 7. PMID 30533800 DOI: 10.1128/MRA.00815-18 |
0.432 |
|
| 2018 |
Pecora N, Zhao X, Nudel K, Hoffmann M, Li N, Onderdonk AB, Yokoe D, Brown E, Allard M, Bry L. Diverse vectors and mechanisms spread NDM beta-lactamases among carbapenem resistant in the Greater Boston area. Antimicrobial Agents and Chemotherapy. PMID 30530605 DOI: 10.1128/AAC.02040-18 |
0.608 |
|
| 2018 |
Tyson GH, Sabo JL, Hoffmann M, Hsu CH, Mukherjee S, Hernandez J, Tillman G, Wasilenko JL, Haro J, Simmons M, Wilson Egbe W, White PL, Dessai U, Mcdermott PF. Novel linezolid resistance plasmids in Enterococcus from food animals in the USA. The Journal of Antimicrobial Chemotherapy. PMID 30272180 DOI: 10.1093/jac/dky369 |
0.458 |
|
| 2018 |
Pirone-Davies C, Chen Y, Pightling A, Ryan G, Wang Y, Yao K, Hoffmann M, Allard MW. Genes significantly associated with lineage II food isolates of Listeria monocytogenes. Bmc Genomics. 19: 708. PMID 30253738 DOI: 10.1186/s12864-018-5074-2 |
0.333 |
|
| 2018 |
Haendiges J, Blessington T, Zheng J, Davidson G, Miller JD, Hoffmann M. Complete Genome Sequences of Four Salmonella enterica subsp. enterica Serovar Senftenberg and Montevideo Isolates Associated with a 2016 Multistate Outbreak in the United States. Genome Announcements. 6. PMID 29954918 DOI: 10.1128/Genomea.00630-18 |
0.551 |
|
| 2018 |
Wentz TG, Yao K, Schill KM, Reddy NR, Skinner GE, Morrissey TR, Wang Y, Muruvanda T, Manickam G, Pillai CA, Thirunavukkarasu N, Hoffmann M, Hammack TS, Brown EW, Allard MW, et al. Closed Genome Sequence of Clostridium botulinum Strain CFSAN064329 (62A). Genome Announcements. 6. PMID 29954889 DOI: 10.1128/genomeA.00528-18 |
0.567 |
|
| 2018 |
Timme RE, Rand H, Sanchez Leon M, Hoffmann M, Strain E, Allard M, Roberson D, Baugher JD. GenomeTrakr proficiency testing for foodborne pathogen surveillance: an exercise from 2015. Microbial Genomics. PMID 29906258 DOI: 10.1099/mgen.0.000185 |
0.423 |
|
| 2018 |
Piombo E, Sela N, Wisniewski M, Hoffmann M, Gullino ML, Allard MW, Levin E, Spadaro D, Droby S. Genome Sequence, Assembly and Characterization of Two Strains Used as Biocontrol Agents of Postharvest Diseases. Frontiers in Microbiology. 9: 593. PMID 29666611 DOI: 10.3389/fmicb.2018.00593 |
0.444 |
|
| 2018 |
Cao G, Allard M, Hoffmann M, Muruvanda T, Luo Y, Payne J, Meng K, Zhao S, McDermott P, Brown E, Meng J. Sequence Analysis of IncA/C and IncI1 Plasmids Isolated from Multidrug-Resistant Salmonella Newport Using Single-Molecule Real-Time Sequencing. Foodborne Pathogens and Disease. PMID 29620958 DOI: 10.1089/Fpd.2017.2385 |
0.624 |
|
| 2018 |
Tadesse DA, Hoffmann M, Sarria S, Lam C, Brown E, Allard M, McDermott PF. Complete Genome Sequences of 14 Salmonella enterica Serovar Enteritidis Strains Recovered from Human Clinical Cases between 1949 and 1995 in the United States. Genome Announcements. 6. PMID 29301885 DOI: 10.1128/genomeA.01406-17 |
0.671 |
|
| 2017 |
Binet R, Pettengill EA, Hoffmann M, Hammack TS, Monday SR. Construction of stable fluorescent laboratory control strains for several food safety relevant Enterobacteriaceae. Food Microbiology. 76: 553-563. PMID 30166187 DOI: 10.1016/j.fm.2017.10.014 |
0.322 |
|
| 2017 |
Wentz TG, Muruvanda T, Lomonaco S, Thirunavukkarasu N, Hoffmann M, Allard MW, Hodge DR, Pillai SP, Hammack TS, Brown EW, Sharma SK. Closed Genome Sequence of Chryseobacterium piperi Strain CTMT/ATCC BAA-1782, a Gram-Negative Bacterium with Clostridial Neurotoxin-Like Coding Sequences. Genome Announcements. 5. PMID 29192076 DOI: 10.1128/genomeA.01296-17 |
0.624 |
|
| 2017 |
Allard MW, Bell R, Ferreira CM, Gonzalez-Escalona N, Hoffmann M, Muruvanda T, Ottesen A, Ramachandran P, Reed E, Sharma S, Stevens E, Timme R, Zheng J, Brown EW. Genomics of foodborne pathogens for microbial food safety. Current Opinion in Biotechnology. 49: 224-229. PMID 29169072 DOI: 10.1016/J.Copbio.2017.11.002 |
0.62 |
|
| 2017 |
Hoffmann M, Pettengill JB, Gonzalez-Escalona N, Miller J, Ayers SL, Zhao S, Allard MW, McDermott PF, Brown EW, Monday SR. Comparative Sequence Analysis of Multidrug-Resistant IncA/C Plasmids from Salmonella enterica. Frontiers in Microbiology. 8: 1459. PMID 28824587 DOI: 10.3389/fmicb.2017.01459 |
0.627 |
|
| 2017 |
Hu L, Zhang G, Allard MW, Yao K, Stones R, Hoffmann M, Brown EW. Complete Genome Sequences of Two Salmonella enterica subsp. enterica Serovar Enteritidis Strains Isolated from Egg Products in the United States. Genome Announcements. 5. PMID 28663302 DOI: 10.1128/genomeA.00614-17 |
0.652 |
|
| 2017 |
Yao K, Muruvanda T, Allard MW, Hoffmann M. Complete Genome Sequences of Three Salmonella enterica subsp. enterica Serovar Saintpaul Isolates Associated with a 2013 Multistate Outbreak in the United States. Genome Announcements. 5. PMID 28572327 DOI: 10.1128/genomeA.00456-17 |
0.523 |
|
| 2017 |
Tate H, Folster JP, Hsu CH, Chen J, Hoffmann M, Li C, Morales C, Tyson GH, Mukerjee S, Brown AC, Green A, Wilson W, Dessai U, Abbott J, Joseph L, et al. Comparative Analysis of Extended Spectrum Beta- Lactamase CTX-M-65-Producing Salmonella Infantis Isolates from Humans, Food Animals, and Retail Chickens in the United States. Antimicrobial Agents and Chemotherapy. PMID 28483962 DOI: 10.1128/AAC.00488-17 |
0.397 |
|
| 2017 |
Zheng J, Luo Y, Reed E, Bell R, Brown EW, Hoffmann M. Whole-genome comparative analysis of Salmonella enterica serovar Newport strains reveals lineage-specific divergence. Genome Biology and Evolution. PMID 28379364 DOI: 10.1093/gbe/evx065 |
0.661 |
|
| 2017 |
Yao K, Roberts RJ, Allard MW, Hoffmann M. Complete Genome and Methylome Sequences of Salmonella enterica subsp. enterica Serovars Typhimurium, Saintpaul, and Stanleyville from the SARA/SARB Collection. Genome Announcements. 5. PMID 28302778 DOI: 10.1128/Genomea.00031-17 |
0.506 |
|
| 2016 |
Lorenz SC, Kotewicz ML, Hoffmann M, Gonzalez-Escalona N, Fischer M, Kase JA. Complete Genome Sequences of Four Enterohemolysin-Positive (ehxA) Enterocyte Effacement-Negative Shiga Toxin-Producing Escherichia coli Strains. Genome Announcements. 4. PMID 27587806 DOI: 10.1128/Genomea.00846-16 |
0.486 |
|
| 2016 |
Lorenz SC, Monday SR, Hoffmann M, Fischer M, Kase JA. Plasmids from Shiga toxin-producing Escherichia coli of rare Enterohemolysin (ehxA) Subtypes reveal Pathogenicity Potential and display a Novel Evolutionary Path. Applied and Environmental Microbiology. PMID 27542930 DOI: 10.1128/Aem.01839-16 |
0.323 |
|
| 2016 |
Yao K, Muruvanda T, Roberts RJ, Payne J, Allard MW, Hoffmann M. Complete Genome and Methylome Sequences of Salmonella enterica subsp. enterica Serovar Panama (ATCC 7378) and Salmonella enterica subsp. enterica Serovar Sloterdijk (ATCC 15791). Genome Announcements. 4. PMID 26988049 DOI: 10.1128/Genomea.00133-16 |
0.534 |
|
| 2016 |
Yao K, Muruvanda T, Roberts RJ, Payne J, Allard MW, Hoffmann M. Complete Genome and Methylome Sequences of Two Salmonella enterica spp. Genome Announcements. 4. PMID 26798102 DOI: 10.1128/Genomea.01599-15 |
0.495 |
|
| 2015 |
Pettengill EA, Hoffmann M, Binet R, Roberts RJ, Payne J, Allard M, Michelacci V, Minelli F, Morabito S. Complete Genome Sequence of Enteroinvasive Escherichia coli O96:H19 Associated with a Severe Foodborne Outbreak. Genome Announcements. 3. PMID 26251502 DOI: 10.1128/Genomea.00883-15 |
0.452 |
|
| 2015 |
Hoffmann M, Payne J, Roberts RJ, Allard MW, Brown EW, Pettengill JB. Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United States. Genome Announcements. 3. PMID 26139714 DOI: 10.1128/Genomea.00690-15 |
0.685 |
|
| 2015 |
Hoffmann M, Luo Y, Monday SR, Gonzalez-Escalona N, Ottesen AR, Muruvanda T, Wang C, Kastanis G, Keys C, Janies D, Senturk IF, Catalyurek UV, Wang H, Hammack TS, Wolfgang WJ, et al. Tracing Origins of the Salmonella Bareilly Strain Causing a Food-borne Outbreak in the United States. The Journal of Infectious Diseases. PMID 25995194 DOI: 10.1093/Infdis/Jiv297 |
0.623 |
|
| 2015 |
Pirone-Davies C, Hoffmann M, Roberts RJ, Muruvanda T, Timme RE, Strain E, Luo Y, Payne J, Luong K, Song Y, Tsai YC, Boitano M, Clark TA, Korlach J, Evans PS, et al. Genome-wide methylation patterns in Salmonella enterica Subsp. enterica Serovars. Plos One. 10: e0123639. PMID 25860355 DOI: 10.1371/Journal.Pone.0123639 |
0.338 |
|
| 2015 |
Cao G, Allard MW, Hoffmann M, Monday SR, Muruvanda T, Luo Y, Payne J, Rump L, Meng K, Zhao S, McDermott PF, Brown EW, Meng J. Complete Sequences of Six IncA/C Plasmids of Multidrug-Resistant Salmonella enterica subsp. enterica Serotype Newport. Genome Announcements. 3. PMID 25720681 DOI: 10.1128/Genomea.00027-15 |
0.58 |
|
| 2014 |
Hoffmann M, Muruvanda T, Pirone C, Korlach J, Timme R, Payne J, Evans P, Meng J, Brown EW, Allard MW. First Fully Closed Genome Sequence of Salmonella enterica subsp. enterica Serovar Cubana Associated with a Food-Borne Outbreak. Genome Announcements. 2. PMID 25359917 DOI: 10.1128/Genomea.01112-14 |
0.668 |
|
| 2014 |
Hoffmann M, Zhao S, Pettengill J, Luo Y, Monday SR, Abbott J, Ayers SL, Cinar HN, Muruvanda T, Li C, Allard MW, Whichard J, Meng J, Brown EW, McDermott PF. Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals. Genome Biology and Evolution. 6: 1046-68. PMID 24732280 DOI: 10.1093/Gbe/Evu079 |
0.651 |
|
| 2014 |
Hoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S. Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast. Genome Announcements. 2. PMID 24699967 DOI: 10.1128/genomeA.00294-14 |
0.652 |
|
| 2013 |
Hoffmann M, Monday SR, McCarthy PJ, Lopez JV, Fischer M, Brown EW. Genetic and phylogenetic evidence for horizontal gene transfer among ecologically disparate groups of marine Vibrio. Cladistics : the International Journal of the Willi Hennig Society. 29: 46-64. PMID 34814374 DOI: 10.1111/j.1096-0031.2012.00416.x |
0.526 |
|
| 2013 |
Hoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S. Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast. Genome Announcements. 1. PMID 24356834 DOI: 10.1128/Genomea.01068-13 |
0.676 |
|
| 2013 |
Chen Y, Mukherjee S, Hoffmann M, Kotewicz ML, Young S, Abbott J, Luo Y, Davidson MK, Allard M, McDermott P, Zhao S. Whole-genome sequencing of gentamicin-resistant Campylobacter coli isolated from U.S. retail meats reveals novel plasmid-mediated aminoglycoside resistance genes. Antimicrobial Agents and Chemotherapy. 57: 5398-405. PMID 23959310 DOI: 10.1128/AAC.00669-13 |
0.531 |
|
| 2013 |
Hoffmann M, Luo Y, Lafon PC, Timme R, Allard MW, McDermott PF, Brown EW, Zhao S. Genome Sequences of Salmonella enterica Serovar Heidelberg Isolates Isolated in the United States from a Multistate Outbreak of Human Salmonella Infections. Genome Announcements. 1. PMID 23405335 DOI: 10.1128/Genomea.00004-12 |
0.624 |
|
| 2012 |
Hoffmann M, Zhao S, Luo Y, Li C, Folster JP, Whichard J, Allard MW, Brown EW, McDermott PF. Genome sequences of five Salmonella enterica serovar Heidelberg isolates associated with a 2011 multistate outbreak in the United States. Journal of Bacteriology. 194: 3274-5. PMID 22628505 DOI: 10.1128/Jb.00419-12 |
0.606 |
|
| 2012 |
Hoffmann M, Monday SR, Allard MW, Strain EA, Whittaker P, Naum M, McCarthy PJ, Lopez JV, Fischer M, Brown EW. Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea. International Journal of Systematic and Evolutionary Microbiology. 62: 1736-43. PMID 21930677 DOI: 10.1099/Ijs.0.032375-0 |
0.493 |
|
| 2010 |
Hoffmann M, Fischer M, Ottesen A, McCarthy PJ, Lopez JV, Brown EW, Monday SR. Population dynamics of Vibrio spp. associated with marine sponge microcosms. The Isme Journal. 4: 1608-12. PMID 20596073 DOI: 10.1038/Ismej.2010.85 |
0.538 |
|
| 2010 |
Hoffmann M, Brown EW, Feng PC, Keys CE, Fischer M, Monday SR. PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species. Bmc Microbiology. 10: 90. PMID 20331883 DOI: 10.1186/1471-2180-10-90 |
0.428 |
|
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