| Year |
Citation |
Score |
| 2023 |
Michael AK, Stoos L, Crosby P, Eggers N, Nie XY, Makasheva K, Minnich M, Healy KL, Weiss J, Kempf G, Cavadini S, Kater L, Seebacher J, Vecchia L, Chakraborty D, et al. Cooperation between bHLH transcription factors and histones for DNA access. Nature. PMID 37407816 DOI: 10.1038/s41586-023-06282-3 |
0.739 |
|
| 2023 |
Isbel L, Iskar M, Durdu S, Weiss J, Grand RS, Hietter-Pfeiffer E, Kozicka Z, Michael AK, Burger L, Thomä NH, Schübeler D. Readout of histone methylation by Trim24 locally restricts chromatin opening by p53. Nature Structural & Molecular Biology. PMID 37386214 DOI: 10.1038/s41594-023-01021-8 |
0.715 |
|
| 2022 |
Setiaputra D, Escribano-Díaz C, Reinert JK, Sadana P, Zong D, Callen E, Sifri C, Seebacher J, Nussenzweig A, Thomä NH, Durocher D. RIF1 acts in DNA repair through phosphopeptide recognition of 53BP1. Molecular Cell. PMID 35216668 DOI: 10.1016/j.molcel.2022.01.025 |
0.444 |
|
| 2022 |
Cable J, Weber-Ban E, Clausen T, Walters KJ, Sharon M, Finley DJ, Gu Y, Hanna J, Feng Y, Martens S, Simonsen A, Hansen M, Zhang H, Goodwin JM, Reggio A, et al. Targeted protein degradation: from small molecules to complex organelles-a Keystone Symposia report. Annals of the New York Academy of Sciences. PMID 35000205 DOI: 10.1111/nyas.14745 |
0.474 |
|
| 2021 |
Grand RS, Burger L, Gräwe C, Michael AK, Isbel L, Hess D, Hoerner L, Iesmantavicius V, Durdu S, Pregnolato M, Krebs AR, Smallwood SA, Thomä N, Vermeulen M, Schübeler D. BANP opens chromatin and activates CpG-island-regulated genes. Nature. PMID 34234345 DOI: 10.1038/s41586-021-03689-8 |
0.732 |
|
| 2021 |
Michael AK, Thomä NH. Reading the chromatinized genome. Cell. PMID 34146479 DOI: 10.1016/j.cell.2021.05.029 |
0.749 |
|
| 2020 |
Pathare GR, Decout A, Glück S, Cavadini S, Makasheva K, Hovius R, Kempf G, Weiss J, Kozicka Z, Guey B, Melenec P, Fierz B, Thomä NH, Ablasser A. Structural mechanism of cGAS inhibition by the nucleosome. Nature. PMID 32911482 DOI: 10.1038/S41586-020-2750-6 |
0.453 |
|
| 2020 |
Michael AK, Grand RS, Isbel L, Cavadini S, Kozicka Z, Kempf G, Bunker RD, Schenk AD, Graff-Meyer A, Pathare GR, Weiss J, Matsumoto S, Burger L, Schübeler D, Thomä NH. Mechanisms of OCT4-SOX2 motif readout on nucleosomes. Science (New York, N.Y.). PMID 32327602 DOI: 10.1126/science.abb0074 |
0.76 |
|
| 2019 |
Rabl J, Bunker RD, Schenk AD, Cavadini S, Gill ME, Abdulrahman W, Andrés-Pons A, Luijsterburg MS, Ibrahim AFM, Branigan E, Aguirre JD, Marceau AH, Guérillon C, Bouwmeester T, Hassiepen U, et al. Structural Basis of BRCC36 Function in DNA Repair and Immune Regulation. Molecular Cell. PMID 31253574 DOI: 10.2210/Pdb6Gvw/Pdb |
0.646 |
|
| 2019 |
Matsumoto S, Cavadini S, Bunker RD, Grand RS, Potenza A, Rabl J, Yamamoto J, Schenk AD, Schübeler D, Iwai S, Sugasawa K, Kurumizaka H, Thomä NH. Publisher Correction: DNA damage detection in nucleosomes involves DNA register shifting. Nature. PMID 31239520 DOI: 10.1038/s41586-019-1343-8 |
0.308 |
|
| 2019 |
Fontana GA, Hess D, Reinert JK, Mattarocci S, Falquet B, Klein D, Shore D, Thomä NH, Rass U. Rif1 S-acylation mediates DNA double-strand break repair at the inner nuclear membrane. Nature Communications. 10: 2535. PMID 31182712 DOI: 10.1038/s41467-019-10349-z |
0.357 |
|
| 2019 |
Matsumoto S, Cavadini S, Bunker RD, Grand RS, Potenza A, Rabl J, Yamamoto J, Schenk AD, Schübeler D, Iwai S, Sugasawa K, Kurumizaka H, Thomä NH. DNA damage detection in nucleosomes involves DNA register shifting. Nature. PMID 31142837 DOI: 10.1038/s41586-019-1259-3 |
0.461 |
|
| 2018 |
Cannavo E, Johnson D, Andres SN, Kissling VM, Reinert JK, Garcia V, Erie DA, Hess D, Thomä NH, Enchev RI, Peter M, Williams RS, Neale MJ, Cejka P. Regulatory control of DNA end resection by Sae2 phosphorylation. Nature Communications. 9: 4016. PMID 30275497 DOI: 10.1038/S41467-018-06417-5 |
0.375 |
|
| 2018 |
Fontana GA, Reinert JK, Thomä NH, Rass U. Shepherding DNA ends: Rif1 protects telomeres and chromosome breaks. Microbial Cell (Graz, Austria). 5: 327-343. PMID 29992129 DOI: 10.15698/mic2018.07.639 |
0.3 |
|
| 2018 |
Ostapcuk V, Mohn F, Carl SH, Basters A, Hess D, Iesmantavicius V, Lampersberger L, Flemr M, Pandey A, Thomä NH, Betschinger J, Bühler M. Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes. Nature. 557: 739-743. PMID 29795351 DOI: 10.1038/S41586-018-0153-8 |
0.414 |
|
| 2017 |
Mattarocci S, Reinert JK, Bunker RD, Fontana GA, Shi T, Klein D, Cavadini S, Faty M, Shyian M, Hafner L, Shore D, Thomä NH, Rass U. Rif1 maintains telomeres and mediates DNA repair by encasing DNA ends. Nature Structural & Molecular Biology. PMID 28604726 DOI: 10.1038/nsmb.3420 |
0.421 |
|
| 2016 |
Cavadini S, Fischer ES, Bunker RD, Potenza A, Lingaraju GM, Goldie KN, Mohamed WI, Faty M, Petzold G, Beckwith RE, Tichkule RB, Hassiepen U, Abdulrahman W, Pantelic RS, Matsumoto S, et al. Cullin-RING ubiquitin E3 ligase regulation by the COP9 signalosome. Nature. 531: 598-603. PMID 27029275 DOI: 10.1038/Nature17416 |
0.362 |
|
| 2016 |
Lingaraju GM, Böhm K, Rabl J, Cavadini S, Fischer ES, Kassube SA, Thomä NH. The crossroads of ubiquitination and DNA repair: A structural perspective Dna Replication, Recombination, and Repair: Molecular Mechanisms and Pathology. 211-232. DOI: 10.1007/978-4-431-55873-6_9 |
0.357 |
|
| 2015 |
Osakabe A, Tachiwana H, Kagawa W, Horikoshi N, Matsumoto S, Hasegawa M, Matsumoto N, Toga T, Yamamoto J, Hanaoka F, Thomä NH, Sugasawa K, Iwai S, Kurumizaka H. Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome. Scientific Reports. 5: 16330. PMID 26573481 DOI: 10.1038/Srep16330 |
0.431 |
|
| 2015 |
Matsumoto S, Fischer ES, Yasuda T, Dohmae N, Iwai S, Mori T, Nishi R, Yoshino K, Sakai W, Hanaoka F, Thomä NH, Sugasawa K. Functional regulation of the DNA damage-recognition factor DDB2 by ubiquitination and interaction with xeroderma pigmentosum group C protein. Nucleic Acids Research. 43: 1700-13. PMID 25628365 DOI: 10.1093/nar/gkv038 |
0.427 |
|
| 2014 |
Mattarocci S, Shyian M, Lemmens L, Damay P, Altintas DM, Shi T, Bartholomew CR, Thomä NH, Hardy CF, Shore D. Rif1 controls DNA replication timing in yeast through the PP1 phosphatase Glc7. Cell Reports. 7: 62-9. PMID 24685139 DOI: 10.1016/j.celrep.2014.03.010 |
0.366 |
|
| 2014 |
Bocquet N, Bizard AH, Abdulrahman W, Larsen NB, Faty M, Cavadini S, Bunker RD, Kowalczykowski SC, Cejka P, Hickson ID, Thomä NH. Structural and mechanistic insight into Holliday-junction dissolution by Topoisomerase IIIα and RMI1 Nature Structural and Molecular Biology. 21: 261-268. PMID 24509834 DOI: 10.1038/Nsmb.2775 |
0.427 |
|
| 2013 |
Shi T, Bunker RD, Mattarocci S, Ribeyre C, Faty M, Gut H, Scrima A, Rass U, Rubin SM, Shore D, Thomä NH. Rif1 and Rif2 shape telomere function and architecture through multivalent Rap1 interactions. Cell. 153: 1340-53. PMID 23746845 DOI: 10.1016/j.cell.2013.05.007 |
0.648 |
|
| 2013 |
Lemmens L, Mattarocci S, Marcomini I, Shi T, Follonier C, Lopes M, Thomä N, Shore D. Global control of DNA replication timing by the budding yeast telomere protein Rif1 Epigenetics & Chromatin. 6. DOI: 10.1186/1756-8935-6-S1-P99 |
0.319 |
|
| 2012 |
Pines A, Vrouwe MG, Marteijn JA, Typas D, Luijsterburg MS, Cansoy M, Hensbergen P, Deelder A, de Groot A, Matsumoto S, Sugasawa K, Thoma N, Vermeulen W, Vrieling H, Mullenders L. PARP1 promotes nucleotide excision repair through DDB2 stabilization and recruitment of ALC1. The Journal of Cell Biology. 199: 235-49. PMID 23045548 DOI: 10.1083/jcb.201112132 |
0.416 |
|
| 2012 |
Hegnauer AM, Hustedt N, Shimada K, Pike BL, Vogel M, Amsler P, Rubin SM, van Leeuwen F, Guénolé A, van Attikum H, Thomä NH, Gasser SM. An N-terminal acidic region of Sgs1 interacts with Rpa70 and recruits Rad53 kinase to stalled forks. The Embo Journal. 31: 3768-83. PMID 22820947 DOI: 10.1038/emboj.2012.195 |
0.59 |
|
| 2011 |
Fischer ES, Scrima A, Böhm K, Matsumoto S, Lingaraju GM, Faty M, Yasuda T, Cavadini S, Wakasugi M, Hanaoka F, Iwai S, Gut H, Sugasawa K, Thomä NH. The molecular basis of CRL4DDB2/CSA ubiquitin ligase architecture, targeting, and activation. Cell. 147: 1024-39. PMID 22118460 DOI: 10.1016/j.cell.2011.10.035 |
0.377 |
|
| 2011 |
Bell O, Tiwari VK, Thomä NH, Schübeler D. Determinants and dynamics of genome accessibility. Nature Reviews. Genetics. 12: 554-64. PMID 21747402 DOI: 10.1038/Nrg3017 |
0.422 |
|
| 2011 |
Schmitges FW, Prusty AB, Faty M, Stützer A, Lingaraju GM, Aiwazian J, Sack R, Hess D, Li L, Zhou S, Bunker RD, Wirth U, Bouwmeester T, Bauer A, Ly-Hartig N, et al. Histone methylation by PRC2 is inhibited by active chromatin marks. Molecular Cell. 42: 330-41. PMID 21549310 DOI: 10.1016/J.Molcel.2011.03.025 |
0.346 |
|
| 2008 |
Scrima A, Koníčková R, Czyzewski BK, Kawasaki Y, Jeffrey PD, Groisman R, Nakatani Y, Iwai S, Pavletich NP, Thomä NH. Structural Basis of UV DNA-Damage Recognition by the DDB1-DDB2 Complex Cell. 135: 1213-1223. PMID 19109893 DOI: 10.1016/J.Cell.2008.10.045 |
0.64 |
|
| 2007 |
Mazina OM, Rossi MJ, Thomä NH, Mazin AV. Interactions of human Rad54 protein with branched DNA molecules Journal of Biological Chemistry. 282: 21068-21080. PMID 17545145 DOI: 10.1074/Jbc.M701992200 |
0.433 |
|
| 2005 |
Thomä NH, Czyzewski BK, Alexeev AA, Mazin AV, Kowalczykowski SC, Pavletich NP. Structure of the SWI2/SNF2 chromatin-remodeling domain of eukaryotic Rad54 Nature Structural and Molecular Biology. 12: 350-356. PMID 15806108 DOI: 10.1038/Nsmb919 |
0.697 |
|
| 2002 |
Yang H, Jeffrey PD, Miller J, Kinnucan E, Sun Y, Thomä NH, Zheng N, Chen PL, Lee WH, Pavletich NP. BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure Science. 297: 1837-1848. PMID 12228710 DOI: 10.1126/Science.297.5588.1837 |
0.7 |
|
| 2002 |
Dursina B, Thomä NH, Sidorovitch V, Niculae A, Iakovenko A, Rak A, Albert S, Ceacareanu AC, Kölling R, Herrmann C, Goody RS, Alexandrov K. Interaction of yeast Rab geranylgeranyl transferase with its protein and lipid substrates. Biochemistry. 41: 6805-16. PMID 12022885 DOI: 10.1021/bi016067w |
0.3 |
|
| 2000 |
Thomä NH, Evans PR, Leadlay PF. Protection of radical intermediates at the active site of adenosylcobalamin-dependent methylmalonyl-CoA mutase. Biochemistry. 39: 9213-21. PMID 10924114 DOI: 10.1021/Bi0004302 |
0.532 |
|
| 1998 |
Thomä NH, Meier TW, Evans PR, Leadlay PF. Stabilization of radical intermediates by an active-site tyrosine residue in methylmalonyl-CoA mutase. Biochemistry. 37: 14386-93. PMID 9772164 DOI: 10.1021/Bi981375O |
0.542 |
|
| 1998 |
Thoma NH, Leadlay PF. 665th Meeting, University of Southampton, United Kingdom, 31 March - 2 April 1998: Structure and mechanism of enzymes: Mechanistic and structural studies on methylmalonyl-CoA mutase Biochemical Society Transactions. 26: 293-298. PMID 9765867 DOI: 10.1042/Bst0260293 |
0.506 |
|
| 1996 |
Thomä NH, Leadlay PF. Homology modeling of human methylmalonyl-CoA mutase: A structural basis for point mutations causing methylmalonic aciduria Protein Science. 5: 1922-1927. PMID 8880917 DOI: 10.1002/Pro.5560050919 |
0.532 |
|
| 1996 |
Meier TW, Thomä NH, Leadlay PF. Tritium isotope effects in adenosylcobalamin-dependent methylmalonyl-CoA mutase. Biochemistry. 35: 11791-6. PMID 8794760 DOI: 10.1021/Bi961250O |
0.499 |
|
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