Kenneth Stedman - Publications

Affiliations: 
Biology Portland State University, Portland, OR, United States 
Area:
Virology Biology, Molecular Biology, Evolution and Development Biology
Website:
http://web.pdx.edu/~kstedman/

38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Taggart NT, Crabtree AM, Creagh JW, Bizarria R, Li S, de la Higuera I, Barnes JE, Shipley MA, Boyer JM, Stedman KM, Ytreberg FM, Rowley PA. Novel viruses of the family Partitiviridae discovered in Saccharomyces cerevisiae. Plos Pathogens. 19: e1011418. PMID 37285383 DOI: 10.1371/journal.ppat.1011418  0.397
2020 de la Higuera I, Kasun GW, Torrance EL, Pratt AA, Maluenda A, Colombet J, Bisseux M, Ravet V, Dayaram A, Stainton D, Kraberger S, Zawar-Reza P, Goldstien S, Briskie JV, White R, ... ... Stedman KM, et al. Unveiling Crucivirus Diversity by Mining Metagenomic Data. Mbio. 11. PMID 32873755 DOI: 10.1128/mBio.01410-20  0.465
2020 Ceballos RM, Drummond CG, Stacy CL, Padilla-Crespo E, Stedman KM. Host-Dependent Differences in Replication Strategy of the Spindle-Shaped Virus Strain SSV9 (a.k.a., SSVK1): Infection Profiles in Hosts of the Family Sulfolobaceae. Frontiers in Microbiology. 11: 1218. PMID 32760354 DOI: 10.3389/fmicb.2020.01218  0.324
2019 de la Higuera I, Torrance EL, Pratt AA, Kasun GW, Maluenda A, Stedman KM. Genome Sequences of Three Cruciviruses Found in the Willamette Valley (Oregon). Microbiology Resource Announcements. 8. PMID 31171623 DOI: 10.1128/MRA.00447-19  0.346
2018 Goodman DA, Stedman KM. Comparative genetic and genomic analysis of the novel fusellovirus Sulfolobus spindle-shaped virus 10. Virus Evolution. 4: vey022. PMID 30094064 DOI: 10.1093/ve/vey022  0.412
2018 Stedman KM. Viral Recombination: Ecology, Evolution, and Pathogenesis. Viruses. 10. PMID 29986376 DOI: 10.3390/v10070358  0.463
2018 Berliner AJ, Mochizuki T, Stedman KM. Astrovirology: Viruses at Large in the Universe. Astrobiology. PMID 29319335 DOI: 10.1089/ast.2017.1649  0.402
2017 Iverson EA, Goodman DA, Gorchels ME, Stedman KM. Genetic Analysis of the Major Capsid Protein of the Archaeal Fusellovirus SSV1: Mutational Flexibility and Conformational Change. Genes. 8. PMID 29292729 DOI: 10.3390/genes8120373  0.42
2017 Iverson EA, Goodman DA, Gorchels ME, Stedman KM. Extreme mutation tolerance: Nearly half of the archaeal fusellovirus SSV1 genes are not required for virus function, including the minor capsid protein gene, vp3. Journal of Virology. PMID 28148789 DOI: 10.1128/JVI.02406-16  0.313
2016 Lim SW, Lance ST, Stedman KM, Abate AR. PCR-activated cell sorting as a general, cultivation-free method for high-throughput identification and enrichment of virus hosts. Journal of Virological Methods. PMID 28042018 DOI: 10.1016/J.Jviromet.2016.12.009  0.345
2016 Lance ST, Sukovich DJ, Stedman KM, Abate AR. Peering below the diffraction limit: robust and specific sorting of viruses with flow cytometry. Virology Journal. 13: 201. PMID 27906039 DOI: 10.1186/S12985-016-0655-7  0.413
2016 Diemer GS, Stedman KM. Modeling Microvirus Capsid Protein Evolution Utilizing Metagenomic Sequence Data. Journal of Molecular Evolution. PMID 27383372 DOI: 10.1007/s00239-016-9751-y  0.751
2015 Stedman KM. Deep Recombination: RNA and ssDNA Virus Genes in DNA Virus and Host Genomes. Annual Review of Virology. 2: 203-17. PMID 26958913 DOI: 10.1146/annurev-virology-100114-055127  0.455
2015 Stedman KM, DeYoung M, Saha M, Sherman MB, Morais MC. Structural insights into the architecture of the hyperthermophilic Fusellovirus SSV1. Virology. 474: 105-9. PMID 25463608 DOI: 10.1016/J.Virol.2014.10.014  0.318
2013 Laidler JR, Shugart JA, Cady SL, Bahjat KS, Stedman KM. Reversible inactivation and desiccation tolerance of silicified viruses. Journal of Virology. 87: 13927-9. PMID 24109222 DOI: 10.1128/Jvi.02825-13  0.751
2013 Stedman K. Mechanisms for RNA capture by ssDNA viruses: grand theft RNA. Journal of Molecular Evolution. 76: 359-64. PMID 23784142 DOI: 10.1007/S00239-013-9569-9  0.457
2013 Stedman KM, Kosmicki NR, Diemer GS. Codon usage frequency of RNA virus genomes from high-temperature acidic-environment metagenomes. Journal of Virology. 87: 1919. PMID 23308027 DOI: 10.1128/Jvi.02610-12  0.73
2012 Iverson E, Stedman K. A genetic study of SSV1, the prototypical fusellovirus. Frontiers in Microbiology. 3: 200. PMID 22679442 DOI: 10.3389/fmicb.2012.00200  0.413
2012 Diemer GS, Stedman KM. A novel virus genome discovered in an extreme environment suggests recombination between unrelated groups of RNA and DNA viruses. Biology Direct. 7: 13. PMID 22515485 DOI: 10.1186/1745-6150-7-13  0.754
2010 Laidler JR, Stedman KM. Virus silicification under simulated hot spring conditions. Astrobiology. 10: 569-76. PMID 20735248 DOI: 10.1089/Ast.2010.0463  0.725
2007 Clore AJ, Stedman KM. The SSV1 viral integrase is not essential. Virology. 361: 103-11. PMID 17175004 DOI: 10.1016/j.virol.2006.11.003  0.389
2006 Erauso G, Stedman KM, van de Werken HJ, Zillig W, van der Oost J. Two novel conjugative plasmids from a single strain of Sulfolobus. Microbiology (Reading, England). 152: 1951-68. PMID 16804171 DOI: 10.1099/mic.0.28861-0  0.552
2004 Rice G, Tang L, Stedman K, Roberto F, Spuhler J, Gillitzer E, Johnson JE, Douglas T, Young M. The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life. Proceedings of the National Academy of Sciences of the United States of America. 101: 7716-20. PMID 15123802 DOI: 10.1073/Pnas.0401773101  0.511
2004 Wiedenheft B, Stedman K, Roberto F, Willits D, Gleske AK, Zoeller L, Snyder J, Douglas T, Young M. Comparative genomic analysis of hyperthermophilic archaeal Fuselloviridae viruses. Journal of Virology. 78: 1954-61. PMID 14747560 DOI: 10.1128/Jvi.78.4.1954-1961.2004  0.481
2003 Snyder JC, Stedman K, Rice G, Wiedenheft B, Spuhler J, Young MJ. Viruses of hyperthermophilic Archaea. Research in Microbiology. 154: 474-82. PMID 14499933 DOI: 10.1016/S0923-2508(03)00127-X  0.509
2003 Stedman KM, She Q, Phan H, Arnold HP, Holz I, Garrett RA, Zillig W. Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2. Research in Microbiology. 154: 295-302. PMID 12798235 DOI: 10.1016/S0923-2508(03)00074-3  0.613
2003 Jonuscheit M, Martusewitsch E, Stedman KM, Schleper C. A reporter gene system for the hyperthermophilic archaeon Sulfolobus solfataricus based on a selectable and integrative shuttle vector. Molecular Microbiology. 48: 1241-52. PMID 12787352 DOI: 10.1046/j.1365-2958.2003.03509.x  0.54
2001 Rice G, Stedman K, Snyder J, Wiedenheft B, Willits D, Brumfield S, McDermott T, Young MJ. Viruses from extreme thermal environments Proceedings of the National Academy of Sciences of the United States of America. 98: 13341-13345. PMID 11606757 DOI: 10.1073/Pnas.231170198  0.464
2001 Prangishvili D, Stedman K, Zillig W. Viruses of the extremely thermophilic archaeon Sulfolobus Trends in Microbiology. 9: 39-43. PMID 11166242 DOI: 10.1016/S0966-842X(00)01910-7  0.685
2000 Stedman KM, She Q, Phan H, Holz I, Singh H, Prangishvili D, Garrett R, Zillig W. pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: Insights into recombination and conjugation in Crenarchaeota Journal of Bacteriology. 182: 7014-7020. PMID 11092863 DOI: 10.1128/Jb.182.24.7014-7020.2000  0.556
1999 Arnold HP, She Q, Phan H, Stedman K, Prangishvili D, Holz I, Kristjansson JK, Garrett R, Zillig W. The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus Molecular Microbiology. 34: 217-226. PMID 10564466 DOI: 10.1046/J.1365-2958.1999.01573.X  0.663
1999 Stedman KM, Schleper C, Rumpf E, Zillig W. Genetic requirements for the function of the archaeal virus SSV1 in Sulfolobus solfataricus: Construction and testing of viral shuttle vectors Genetics. 152: 1397-1405. PMID 10430570  0.623
1998 She Q, Phan H, Garrett RA, Albers SV, Stedman KM, Zillig W. Genetic profile of pNOB8 from Sulfolobus: The first conjugative plasmid from an archaeon Extremophiles. 2: 417-425. PMID 9827331 DOI: 10.1007/S007920050087  0.557
1998 Prangishvili D, Albers SV, Holz I, Arnold HP, Stedman K, Klein T, Singh H, Hiort J, Schweier A, Kristjansson JK, Zillig W. Conjugation in archaea: Frequent occurrence of conjugative plasmids in Sulfolobus Plasmid. 40: 190-202. PMID 9806856 DOI: 10.1006/Plas.1998.1363  0.545
1998 Zillig W, Arnold HP, Holz I, Prangishvili D, Schweier A, Stedman K, She Q, Phan H, Garrett R, Kristjansson JK. Genetic elements in the extremely thermophilic archaeon Sulfolobus Extremophiles. 2: 131-140. PMID 9783157 DOI: 10.1007/S007920050052  0.61
1997 Nohaile M, Kern D, Wemmer D, Stedman K, Kustu S. Structural and functional analyses of activating amino acid substitutions in the receiver domain of NtrC: Evidence for an activating surface Journal of Molecular Biology. 273: 299-316. PMID 9367763 DOI: 10.1006/Jmbi.1997.1296  0.578
1994 Klose KE, North AK, Stedman KM, Kustu S. The major dimerization determinants of the nitrogen regulatory protein NTRC from enteric bacteria lie in its carboxy-terminal domain. Journal of Molecular Biology. 241: 233-45. PMID 8057363 DOI: 10.1006/Jmbi.1994.1492  0.673
1993 North AK, Klose KE, Stedman KM, Kustu S. Prokaryotic enhancer-binding proteins reflect eukaryote-like modularity: the puzzle of nitrogen regulatory protein C. Journal of Bacteriology. 175: 4267-73. PMID 8331061 DOI: 10.1128/Jb.175.14.4267-4273.1993  0.658
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