| Year |
Citation |
Score |
| 2023 |
Machado FA, Mongle CS, Slater G, Penna A, Wisniewski A, Soffin A, Dutra V, Uyeda JC. Rules of teeth development align microevolution with macroevolution in extant and extinct primates. Nature Ecology & Evolution. PMID 37652997 DOI: 10.1038/s41559-023-02167-w |
0.769 |
|
| 2023 |
Rolland J, Henao-Diaz LF, Doebeli M, Germain R, Harmon LJ, Knowles LL, Liow LH, Mank JE, Machac A, Otto SP, Pennell M, Salamin N, Silvestro D, Sugawara M, Uyeda J, et al. Conceptual and empirical bridges between micro- and macroevolution. Nature Ecology & Evolution. PMID 37429904 DOI: 10.1038/s41559-023-02116-7 |
0.71 |
|
| 2022 |
Liow LH, Uyeda J, Hunt G. Cross-disciplinary information for understanding macroevolution. Trends in Ecology & Evolution. PMID 36456381 DOI: 10.1016/j.tree.2022.10.013 |
0.306 |
|
| 2022 |
Mongle CS, Nesbitt A, Machado FA, Smaers JB, Turner AH, Grine FE, Uyeda JC. A common mechanism drives the alignment between the micro- and macroevolution of primate. Evolution; International Journal of Organic Evolution. PMID 36005286 DOI: 10.1111/evo.14600 |
0.764 |
|
| 2022 |
Porto DS, Dahdul WM, Lapp H, Balhoff JP, Vision TJ, Mabee PM, Uyeda J. Assessing Bayesian Phylogenetic Information Content of Morphological Data Using Knowledge from Anatomy Ontologies. Systematic Biology. PMID 35285502 DOI: 10.1093/sysbio/syac022 |
0.727 |
|
| 2021 |
Román Palacios C, Wright A, Uyeda J. treedata.table: a wrapper for data.table that enables fast manipulation of large phylogenetic trees matched to data. Peerj. 9: e12450. PMID 34900417 DOI: 10.7717/peerj.12450 |
0.582 |
|
| 2021 |
Uyeda JC, Bone N, McHugh S, Rolland J, Pennell MW. How should functional relationships be evaluated using phylogenetic comparative methods? A case study using metabolic rate and body temperature. Evolution; International Journal of Organic Evolution. PMID 33788258 DOI: 10.1111/evo.14213 |
0.615 |
|
| 2020 |
Farallo VR, Muñoz MM, Uyeda JC, Miles DB. Scaling between macro- to microscale climatic data reveals strong phylogenetic inertia in niche evolution in plethodontid salamanders. Evolution; International Journal of Organic Evolution. PMID 32190909 DOI: 10.1111/Evo.13959 |
0.396 |
|
| 2019 |
Tarasov S, Miko I, Yoder M, Uyeda J. Exploring and Reconstructing Ancestral Anatomies using Ontology-Informed Approaches Biodiversity Information Science and Standards. 3. DOI: 10.3897/BISS.3.37038 |
0.372 |
|
| 2019 |
Tarasov S, Mikó I, Yoder MJ, Uyeda JC. PARAMO: A Pipeline for Reconstructing Ancestral Anatomies Using Ontologies and Stochastic Mapping Insect Systematics and Diversity. 3. DOI: 10.1093/Isd/Ixz009 |
0.779 |
|
| 2018 |
Uyeda JC, Zenil-Ferguson R, Pennell MW. Rethinking phylogenetic comparative methods. Systematic Biology. PMID 29701838 DOI: 10.1093/Sysbio/Syy031 |
0.787 |
|
| 2018 |
Zanne AE, Pearse WD, Cornwell WK, McGlinn DJ, Wright IJ, Uyeda JC. Functional biogeography of angiosperms: life at the extremes. The New Phytologist. PMID 29603243 DOI: 10.1111/Nph.15114 |
0.452 |
|
| 2017 |
Boucher FC, Démery V, Conti E, Harmon LJ, Uyeda J. A General Model For Estimating Macroevolutionary Landscapes. Systematic Biology. PMID 29029264 DOI: 10.1093/Sysbio/Syx075 |
0.65 |
|
| 2017 |
Hagey TJ, Uyeda JC, Crandell KE, Cheney JA, Autumn K, Harmon LJ. Tempo and mode of performance evolution across multiple independent origins of adhesive toe pads in lizards. Evolution; International Journal of Organic Evolution. PMID 28745397 DOI: 10.1111/Evo.13318 |
0.78 |
|
| 2017 |
Uyeda JC, Pennell MW, Miller ET, Maia R, McClain CR. The Evolution of Energetic Scaling across the Vertebrate Tree of Life. The American Naturalist. 190: 185-199. PMID 28731792 DOI: 10.1086/692326 |
0.715 |
|
| 2016 |
Uyeda JC, Harmon LJ, Blank CE. A Comprehensive Study of Cyanobacterial Morphological and Ecological Evolutionary Dynamics through Deep Geologic Time. Plos One. 11: e0162539. PMID 27649395 DOI: 10.1371/Journal.Pone.0162539 |
0.688 |
|
| 2015 |
Uyeda JC, Caetano DS, Pennell MW. Comparative Analysis of Principal Components Can be Misleading. Systematic Biology. 64: 677-89. PMID 25841167 DOI: 10.1093/Sysbio/Syv019 |
0.792 |
|
| 2014 |
Uyeda JC, Harmon LJ. A novel Bayesian method for inferring and interpreting the dynamics of adaptive landscapes from phylogenetic comparative data. Systematic Biology. 63: 902-18. PMID 25077513 DOI: 10.1093/Sysbio/Syu057 |
0.684 |
|
| 2014 |
Pennell MW, Eastman JM, Slater GJ, Brown JW, Uyeda JC, FitzJohn RG, Alfaro ME, Harmon LJ. geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees. Bioinformatics (Oxford, England). 30: 2216-8. PMID 24728855 DOI: 10.1093/Bioinformatics/Btu181 |
0.768 |
|
| 2014 |
Pennell MW, Harmon LJ, Uyeda JC. Speciation is unlikely to drive divergence rates. Trends in Ecology & Evolution. 29: 72-3. PMID 24418606 DOI: 10.1016/J.Tree.2013.12.010 |
0.76 |
|
| 2014 |
Pennell MW, Harmon LJ, Uyeda JC. Is there room for punctuated equilibrium in macroevolution? Trends in Ecology & Evolution. 29: 23-32. PMID 23978567 DOI: 10.1016/J.Tree.2013.07.004 |
0.774 |
|
| 2012 |
Jones AG, Bürger R, Arnold SJ, Hohenlohe PA, Uyeda JC. The effects of stochastic and episodic movement of the optimum on the evolution of the G-matrix and the response of the trait mean to selection. Journal of Evolutionary Biology. 25: 2210-31. PMID 22957960 DOI: 10.1111/J.1420-9101.2012.02598.X |
0.547 |
|
| 2011 |
Uyeda JC, Hansen TF, Arnold SJ, Pienaar J. The million-year wait for macroevolutionary bursts. Proceedings of the National Academy of Sciences of the United States of America. 108: 15908-13. PMID 21873251 DOI: 10.1073/Pnas.1014503108 |
0.643 |
|
| 2011 |
Westphal MF, Morey SR, Uyeda JC, Morgan TJ. Molecular phylogeny of the subfamily Amphistichinae (Teleostei: Embiotocidae) reveals parallel divergent evolution of red pigmentation in two rapidly evolving lineages of sand-dwelling surfperch. Journal of Fish Biology. 79: 313-30. PMID 21781095 DOI: 10.1111/J.1095-8649.2011.03011.X |
0.361 |
|
| 2009 |
Uyeda JC, Arnold SJ, Hohenlohe PA, Mead LS. Drift promotes speciation by sexual selection. Evolution; International Journal of Organic Evolution. 63: 583-94. PMID 19087180 DOI: 10.1111/J.1558-5646.2008.00589.X |
0.556 |
|
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