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Brian D. Badgley, Ph.D. - Publications

Affiliations: 
University of South Florida, Tampa, FL, United States 
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 DeVilbiss SE, Steele MK, Brown BL, Badgley BD. Stream bacterial diversity peaks at intermediate freshwater salinity and varies by salt type. The Science of the Total Environment. 840: 156690. PMID 35714745 DOI: 10.1016/j.scitotenv.2022.156690  0.32
2021 Harb C, Pan J, DeVilbiss S, Badgley B, Marr LC, Schmale DG, Foroutan H. Increasing Freshwater Salinity Impacts Aerosolized Bacteria. Environmental Science & Technology. PMID 33819033 DOI: 10.1021/acs.est.0c08558  0.341
2020 Luo S, Waller L, Badgley B, He Z, Young EB. Effects of bacterial inoculation and nitrogen loading on bacterial-algal consortium composition and functions in an integrated photobioelectrochemical system. The Science of the Total Environment. 716: 137135. PMID 32059304 DOI: 10.1016/J.Scitotenv.2020.137135  0.396
2019 Badgley BD, Steele MK, Cappellin C, Burger J, Jian J, Neher TP, Orentas M, Wagner R. Fecal indicator dynamics at the watershed scale: Variable relationships with land use, season, and water chemistry. The Science of the Total Environment. 697: 134113. PMID 32380608 DOI: 10.1016/J.Scitotenv.2019.134113  0.428
2019 Osburn ED, McBride SG, Aylward FO, Badgley BD, Strahm BD, Knoepp JD, Barrett JE. Soil Bacterial and Fungal Communities Exhibit Distinct Long-Term Responses to Disturbance in Temperate Forests. Frontiers in Microbiology. 10: 2872. PMID 31921050 DOI: 10.3389/Fmicb.2019.02872  0.353
2019 Wepking C, Badgley B, Barrett JE, Knowlton KF, Lucas JM, Minick KJ, Ray PP, Shawver SE, Strickland MS. Prolonged exposure to manure from livestock-administered antibiotics decreases ecosystem carbon-use efficiency and alters nitrogen cycling. Ecology Letters. PMID 31595680 DOI: 10.1111/Ele.13390  0.377
2019 Weiskerger CJ, Brandão J, Ahmed W, Aslan A, Avolio L, Badgley BD, Boehm AB, Edge TA, Fleisher JM, Heaney CD, Jordao L, Kinzelman JL, Klaus JS, Kleinheinz GT, Meriläinen P, et al. Impacts of a changing earth on microbial dynamics and human health risks in the continuum between beach water and sand. Water Research. 162: 456-470. PMID 31301475 DOI: 10.1016/J.Watres.2019.07.006  0.427
2019 Medina D, Hughey MC, Walke JB, Becker MH, Pontarelli K, Sun S, Badgley B, Belden LK. Amphibian skin fungal communities vary across host species and do not correlate with infection by a pathogenic fungus. Environmental Microbiology. PMID 31087743 DOI: 10.1111/1462-2920.14682  0.345
2019 Vander Vorste R, Timpano AJ, Cappellin C, Badgley BD, Zipper CE, Schoenholtz SH. Microbial and macroinvertebrate communities, but not leaf decomposition, change along a mining-induced salinity gradient Freshwater Biology. 64: 671-684. DOI: 10.1111/Fwb.13253  0.329
2019 Sun S, Badgley BD. Changes in microbial functional genes within the soil metagenome during forest ecosystem restoration Soil Biology and Biochemistry. 135: 163-172. DOI: 10.1016/J.Soilbio.2019.05.004  0.348
2018 Waller LJ, Evanylo GK, Krometis LH, Strickland MS, Wynn-Thompson T, Badgley BD. Engineered and Environmental Controls of Microbial Denitrification in Established Bioretention Cells. Environmental Science & Technology. PMID 29634901 DOI: 10.1021/Acs.Est.7B06704  0.4
2018 Blaszczak JR, Steele MK, Badgley BD, Heffernan JB, Hobbie SE, Morse JL, Rivers EN, Hall SJ, Neill C, Pataki DE, Groffman PM, Bernhardt ES. Sediment chemistry of urban stormwater ponds and controls on denitrification Ecosphere. 9: e02318. DOI: 10.1002/Ecs2.2318  0.31
2017 Yuan H, Sun S, Abu-Reesh IM, Badgley B, He Z. Unravelling and Reconstructing the Nexus of Salinity, Electricity and Microbial Ecology for Bioelectrochemical Desalination. Environmental Science & Technology. PMID 28954508 DOI: 10.1021/Acs.Est.7B03763  0.384
2017 Li X, Sun S, Yuan H, Badgley BD, He Z. Mainstream upflow nitritation-anammox system with hybrid anaerobic pretreatment: Long-term performance and microbial community dynamics. Water Research. 125: 298-308. PMID 28866445 DOI: 10.1016/J.Watres.2017.08.048  0.384
2017 Cantor J, Krometis LA, Sarver E, Cook N, Badgley B. Tracking the downstream impacts of inadequate sanitation in central Appalachia. Journal of Water and Health. 15: 580-590. PMID 28771155 DOI: 10.2166/Wh.2017.005  0.437
2017 Garner E, Benitez R, von Wagoner E, Sawyer R, Schaberg E, Hession WC, Krometis LH, Badgley BD, Pruden A. Stormwater loadings of antibiotic resistance genes in an urban stream. Water Research. 123: 144-152. PMID 28662396 DOI: 10.1016/J.Watres.2017.06.046  0.365
2017 Sun S, Li S, Avera BN, Strahm BD, Badgley BD. Soil bacterial and fungal communities show distinct recovery patterns during forest ecosystem restoration. Applied and Environmental Microbiology. PMID 28476769 DOI: 10.1128/Aem.00966-17  0.378
2017 Wepking C, Avera B, Badgley B, Barrett JE, Franklin J, Knowlton KF, Ray PP, Smitherman C, Strickland MS. Exposure to dairy manure leads to greater antibiotic resistance and increased mass-specific respiration in soil microbial communities. Proceedings. Biological Sciences. 284. PMID 28356447 DOI: 10.1098/Rspb.2016.2233  0.352
2016 Young S, Nayak B, Sun S, Badgley B, Rohr J, Harwood VJ. Vancomycin resistant enterococci and bacterial community structure following a sewage spill into an aquatic environment. Applied and Environmental Microbiology. PMID 27422829 DOI: 10.1128/Aem.01927-16  0.46
2016 Li X, Sun S, Badgley BD, He Z. Long-term performance and microbial community characterization of an osmotic anammox system for removing reverse-fluxed ammonium. Bioresource Technology. 211: 628-635. PMID 27046789 DOI: 10.1016/J.Biortech.2016.03.137  0.373
2016 Li X, Sun S, Badgley BD, Sung S, Zhang H, He Z. Nitrogen removal by granular nitritation-anammox in an upflow membrane-aerated biofilm reactor. Water Research. 94: 23-31. PMID 26921710 DOI: 10.1016/J.Watres.2016.02.031  0.358
2015 Liao H, Krometis LA, Cully Hession W, Benitez R, Sawyer R, Schaberg E, von Wagoner E, Badgley BD. Storm loads of culturable and molecular fecal indicators in an inland urban stream. The Science of the Total Environment. 530: 347-56. PMID 26050960 DOI: 10.1016/J.Scitotenv.2015.05.098  0.356
2014 Guentzel KS, Hondzo M, Badgley BD, Finlay JC, Sadowsky MJ, Kozarek JL. Measurement and Modeling of Denitrification in Sand-Bed Streams under Various Land Uses. Journal of Environmental Quality. 43: 1013-23. PMID 25602830 DOI: 10.2134/Jeq2013.06.0249  0.397
2014 Liao H, Krometis LA, Hession WC, House LL, Kline K, Badgley BD. Hydrometeorological and physicochemical drivers of fecal indicator bacteria in urban stream bottom sediments. Journal of Environmental Quality. 43: 2034-43. PMID 25602220 DOI: 10.2134/Jeq2014.06.0255  0.445
2014 Harwood VJ, Staley C, Badgley BD, Borges K, Korajkic A. Microbial source tracking markers for detection of fecal contamination in environmental waters: relationships between pathogens and human health outcomes. Fems Microbiology Reviews. 38: 1-40. PMID 23815638 DOI: 10.1111/1574-6976.12031  0.375
2013 Sinigalliano CD, Ervin JS, Van De Werfhorst LC, Badgley BD, Ballesté E, Bartkowiak J, Boehm AB, Byappanahalli M, Goodwin KD, Gourmelon M, Griffith J, Holden PA, Jay J, Layton B, Lee C, et al. Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources. Water Research. 47: 6883-96. PMID 23916157 DOI: 10.1016/J.Watres.2013.02.059  0.322
2013 Ebentier DL, Hanley KT, Cao Y, Badgley BD, Boehm AB, Ervin JS, Goodwin KD, Gourmelon M, Griffith JF, Holden PA, Kelty CA, Lozach S, McGee C, Peed LA, Raith M, et al. Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods. Water Research. 47: 6839-48. PMID 23911226 DOI: 10.1016/J.Watres.2013.01.060  0.336
2013 Cao Y, Van De Werfhorst LC, Dubinsky EA, Badgley BD, Sadowsky MJ, Andersen GL, Griffith JF, Holden PA. Evaluation of molecular community analysis methods for discerning fecal sources and human waste. Water Research. 47: 6862-72. PMID 23880215 DOI: 10.1016/J.Watres.2013.02.061  0.359
2013 Ran Q, Badgley BD, Dillon N, Dunny GM, Sadowsky MJ. Occurrence, genetic diversity, and persistence of enterococci in a Lake Superior watershed. Applied and Environmental Microbiology. 79: 3067-75. PMID 23455345 DOI: 10.1128/Aem.03908-12  0.401
2013 Sugawara M, Epstein B, Badgley BD, Unno T, Xu L, Reese J, Gyaneshwar P, Denny R, Mudge J, Bharti AK, Farmer AD, May GD, Woodward JE, Médigue C, Vallenet D, et al. Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies. Genome Biology. 14: R17. PMID 23425606 DOI: 10.1186/Gb-2013-14-2-R17  0.308
2013 Thomas FIM, Kregting LT, Badgley BD, Donahue MJ, Yund PO. Fertilization in a sea urchin is not only a water column process: Effects of water flow on fertilization near a spawing female Marine Ecology Progress Series. 494: 231-240. DOI: 10.3354/Meps10601  0.54
2012 Badgley BD, Ferguson J, Hou Z, Sadowsky MJ. A model laboratory system to study the synergistic interaction and growth of environmental Escherichia coli with macrophytic green algae Journal of Great Lakes Research. 38: 390-395. DOI: 10.1016/J.Jglr.2012.03.005  0.355
2011 Badgley BD, Thomas FI, Harwood VJ. Quantifying environmental reservoirs of fecal indicator bacteria associated with sediment and submerged aquatic vegetation. Environmental Microbiology. 13: 932-42. PMID 21208357 DOI: 10.1111/J.1462-2920.2010.02397.X  0.6
2011 Badgley BD, Ferguson J, Vanden Heuvel A, Kleinheinz GT, McDermott CM, Sandrin TR, Kinzelman J, Junion EA, Byappanahalli MN, Whitman RL, Sadowsky MJ. Multi-scale temporal and spatial variation in genotypic composition of Cladophora-borne Escherichia coli populations in Lake Michigan. Water Research. 45: 721-31. PMID 20851450 DOI: 10.1016/J.Watres.2010.08.041  0.355
2010 Badgley BD, Nayak BS, Harwood VJ. The importance of sediment and submerged aquatic vegetation as potential habitats for persistent strains of enterococci in a subtropical watershed. Water Research. 44: 5857-66. PMID 20678788 DOI: 10.1016/J.Watres.2010.07.005  0.447
2010 Badgley BD, Thomas FI, Harwood VJ. The effects of submerged aquatic vegetation on the persistence of environmental populations of Enterococcus spp. Environmental Microbiology. 12: 1271-81. PMID 20192964 DOI: 10.1111/J.1462-2920.2010.02169.X  0.587
2009 Korajkic A, Badgley BD, Brownell MJ, Harwood VJ. Application of microbial source tracking methods in a Gulf of Mexico field setting. Journal of Applied Microbiology. 107: 1518-27. PMID 19457032 DOI: 10.1111/J.1365-2672.2009.04351.X  0.464
2006 Badgley BD, Lipschultz F, Sebens KP. Nitrate uptake by the reef coral Diploria strigosa: Effects of concentration, water flow, and irradiance Marine Biology. 149: 327-338. DOI: 10.1007/S00227-005-0180-5  0.344
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