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Sara Branco, Ph.D. - Publications

Affiliations: 
2010 Evolutionary Biology University of Chicago, Chicago, IL 
Area:
General Biology, Ecology Biology, Evolution and Development Biology
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ke YH, Branco S, Bazzicalupo AL, Nguyen NH, Liao HL, Kennedy P, Bruns TD, Kuo A, LaButti K, Barry K, Grigoriev I, Vilgalys R. Genomic determination of breeding systems and trans-specific evolution of HD MAT genes in suilloid fungi. Genetics. PMID 37070772 DOI: 10.1093/genetics/iyad069  0.617
2020 Lofgren LA, Nguyen NH, Vilgalys R, Ruytinx J, Liao HL, Branco S, Kuo A, LaButti K, Lipzen A, Andreopoulos W, Pangilinan J, Riley R, Hundley H, Na H, Barry K, et al. Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. The New Phytologist. PMID 33355923 DOI: 10.1111/nph.17160  0.555
2020 Bazzicalupo AL, Thomas M, Munro-Ehrlich RM, Branco S. Gene Copy Number Variation Does Not Reflect Structure or Environmental Selection in Two Recently Diverged California Populations of . G3 (Bethesda, Md.). PMID 33051263 DOI: 10.1534/g3.120.401735  0.303
2020 Bazzicalupo AL, Ruytinx J, Ke YH, Coninx L, Colpaert JV, Nguyen NH, Vilgalys R, Branco S. Fungal heavy metal adaptation through single nucleotide polymorphisms and copy-number variation. Molecular Ecology. PMID 32866320 DOI: 10.1111/Mec.15618  0.314
2019 Carpentier F, Rodríguez de la Vega RC, Branco S, Snirc A, Coelho MA, Hood ME, Giraud T. Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi. Genome Research. PMID 31043437 DOI: 10.1101/Gr.242578.118  0.442
2019 Branco S. Fungal diversity from communities to genes Fungal Biology Reviews. 33: 225-237. DOI: 10.1016/J.Fbr.2019.06.003  0.42
2018 Lofgren LA, Uehling JK, Branco S, Bruns TD, Martin F, Kennedy PG. Genome-based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles. Molecular Ecology. PMID 30582650 DOI: 10.1111/Mec.14995  0.656
2018 Branco S, Carpentier F, Rodríguez de la Vega RC, Badouin H, Snirc A, Le Prieur S, Coelho MA, de Vienne DM, Hartmann FE, Begerow D, Hood ME, Giraud T. Multiple convergent supergene evolution events in mating-type chromosomes. Nature Communications. 9: 2000. PMID 29784936 DOI: 10.1038/S41467-018-04380-9  0.411
2017 Taylor JW, Branco S, Gao C, Hann-Soden C, Montoya L, Sylvain I, Gladieux P. Sources of Fungal Genetic Variation and Associating It with Phenotypic Diversity. Microbiology Spectrum. 5. PMID 28936945 DOI: 10.1128/Microbiolspec.Funk-0057-2016  0.753
2017 Rosenthal LM, Larsson KH, Branco S, Chung JA, Glassman SI, Liao HL, Peay KG, Smith DP, Talbot JM, Taylor JW, Vellinga EC, Vilgalys R, Bruns TD. Survey of corticioid fungi in North American pinaceous forests reveals hyperdiversity, underpopulated sequence databases, and species that are potentially ectomycorrhizal. Mycologia. 109: 115-127. PMID 28402791 DOI: 10.1080/00275514.2017.1281677  0.688
2016 Branco S, Bi K, Liao HL, Gladieux P, Badouin H, Ellison CE, Nguyen NH, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Continental-level population differentiation and environmental adaptation in the mushroom Suillus brevipes. Molecular Ecology. PMID 27761941 DOI: 10.1111/Mec.13892  0.782
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi. Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8. PMID 26195774 DOI: 10.1073/Pnas.1503159112  0.665
2015 Branco S, Gladieux P, Ellison CE, Kuo A, LaButti K, Lipzen A, Grigoriev IV, Liao HL, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Genetic isolation between two recently diverged populations of a symbiotic fungus. Molecular Ecology. 24: 2747-58. PMID 25728665 DOI: 10.1111/Mec.13132  0.784
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8908. DOI: 10.1073/pnas.1503159112  0.695
2015 Nguyen NH, Song Z, Bates ST, Branco S, Tedersoo L, Menke J, Schilling JS, Kennedy PG. FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild Fungal Ecology. DOI: 10.1016/J.Funeco.2015.06.006  0.458
2014 Liao HL, Chen Y, Bruns TD, Peay KG, Taylor JW, Branco S, Talbot JM, Vilgalys R. Metatranscriptomic analysis of ectomycorrhizal roots reveals genes associated with Piloderma-Pinus symbiosis: improved methodologies for assessing gene expression in situ. Environmental Microbiology. 16: 3730-42. PMID 25186788 DOI: 10.1111/1462-2920.12619  0.648
2014 Talbot JM, Bruns TD, Taylor JW, Smith DP, Branco S, Glassman SI, Erlandson S, Vilgalys R, Liao HL, Smith ME, Peay KG. Endemism and functional convergence across the North American soil mycobiome. Proceedings of the National Academy of Sciences of the United States of America. 111: 6341-6. PMID 24733885 DOI: 10.1073/Pnas.1402584111  0.63
2014 Gladieux P, Ropars J, Badouin H, Branca A, Aguileta G, de Vienne DM, Rodríguez de la Vega RC, Branco S, Giraud T. Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes. Molecular Ecology. 23: 753-73. PMID 24341913 DOI: 10.1111/Mec.12631  0.714
2014 Nilsson RH, Hyde KD, Pawłowska J, Ryberg M, Tedersoo L, Aas AB, Alias SA, Alves A, Anderson CL, Antonelli A, Arnold AE, Bahnmann B, Bahram M, Bengtsson-Palme J, Berlin A, ... Branco S, et al. Improving ITS sequence data for identification of plant pathogenic fungi Fungal Diversity. 67: 11-19. DOI: 10.1007/S13225-014-0291-8  0.455
2013 Branco S, Bruns TD, Singleton I. Fungi at a small scale: spatial zonation of fungal assemblages around single trees. Plos One. 8: e78295. PMID 24147130 DOI: 10.1371/Journal.Pone.0078295  0.598
2013 Bengtsson-Palme J, Ryberg M, Hartmann M, Branco S, Wang Z, Godhe A, De Wit P, Sánchez-García M, Ebersberger I, de Sousa F, Amend A, Jumpponen A, Unterseher M, Kristiansson E, Abarenkov K, et al. Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data Methods in Ecology and Evolution. 4: 914-919. DOI: 10.1111/2041-210X.12073  0.418
2013 Talbot JM, Bruns TD, Smith DP, Branco S, Glassman SI, Erlandson S, Vilgalys R, Peay KG. Independent roles of ectomycorrhizal and saprotrophic communities in soil organic matter decomposition Soil Biology and Biochemistry. 57: 282-291. DOI: 10.1016/J.Soilbio.2012.10.004  0.541
2011 Nilsson RH, Veldre V, Wang Z, Eckart M, Branco S, Hartmann M, Quince C, Godhe A, Bertrand Y, Alfredsson JF, Larsson K, Kõljalg U, Abarenkov K. A note on the incidence of reverse complementary fungal ITS sequences in the public sequence databases and a software tool for their detection and reorientation Mycoscience. 52: 278-282. DOI: 10.1007/S10267-010-0086-Z  0.401
2010 Avis PG, Branco S, Tang Y, Mueller GM. Pooled samples bias fungal community descriptions. Molecular Ecology Resources. 10: 135-41. PMID 21564998 DOI: 10.1111/J.1755-0998.2009.02743.X  0.771
2010 Branco S, Ree RH. Serpentine soils do not limit mycorrhizal fungal diversity. Plos One. 5: e11757. PMID 20668696 DOI: 10.1371/Journal.Pone.0011757  0.316
2008 Bruns TD, Blackwell M, Edwards I, Taylor AFS, Horton T, Zhang N, Kõljalg U, May G, Kuyper TW, Bever JD, Gilbert G, Taylor JW, DeSantis TZ, Pringle A, Borneman J, ... ... Branco S, et al. Preserving accuracy in GenBank Science. 319: 1616. PMID 18356505 DOI: 10.1126/Science.319.5870.1616A  0.593
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