Kim M. Pepin, Ph.D. - Publications

Affiliations: 
2006 University of Idaho, Moscow, ID, United States 
Area:
Genetics, Molecular Biology

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Pepin KM, Golnar AJ, Abdo Z, Podgórski T. Ecological drivers of African swine fever virus persistence in wild boar populations: Insight for control. Ecology and Evolution. 10: 2846-2859. PMID 32211160 DOI: 10.1002/Ece3.6100  0.449
2020 Pepin KM, Smyser TJ, Davis AJ, Miller RS, McKee S, VerCauteren KC, Kendall W, Slootmaker C. Optimal spatial prioritization of control resources for elimination of invasive species under demographic uncertainty. Ecological Applications : a Publication of the Ecological Society of America. PMID 32167631 DOI: 10.1002/Eap.2126  0.345
2020 Pepin KM, Snow NP, VerCauteren KC. Optimal bait density for delivery of acute toxicants to vertebrate pests Journal of Pest Science. 93: 723-735. DOI: 10.1007/S10340-020-01196-9  0.349
2019 Wilber MQ, Chinn SM, Beasley JC, Boughton RK, Brook RK, Ditchkoff SS, Fischer JW, Hartley SB, Holmstrom LK, Kilgo JC, Lewis JS, Miller RS, Snow NP, VerCauteren KC, Wisely SM, ... ... Pepin KM, et al. Predicting functional responses in agro-ecosystems from animal movement data to improve management of invasive pests. Ecological Applications : a Publication of the Ecological Society of America. PMID 31596984 DOI: 10.1002/eap.2015  0.325
2019 Cross PC, Prosser DJ, Ramey AM, Hanks EM, Pepin KM. Confronting models with data: the challenges of estimating disease spillover. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180435. PMID 31401965 DOI: 10.1098/Rstb.2018.0435  0.399
2019 Pepin KM, Hopken MW, Shriner SA, Spackman E, Abdo Z, Parrish C, Riley S, Lloyd-Smith JO, Piaggio AJ. Improving risk assessment of the emergence of novel influenza A viruses by incorporating environmental surveillance. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180346. PMID 31401963 DOI: 10.1098/Rstb.2018.0346  0.412
2019 Manlove KR, Sampson LM, Borremans B, Cassirer EF, Miller RS, Pepin KM, Besser TE, Cross PC. Epidemic growth rates and host movement patterns shape management performance for pathogen spillover at the wildlife-livestock interface. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180343. PMID 31401952 DOI: 10.1098/Rstb.2018.0343  0.381
2019 Sokolow SH, Nova N, Pepin KM, Peel AJ, Pulliam JRC, Manlove K, Cross PC, Becker DJ, Plowright RK, McCallum H, De Leo GA. Ecological interventions to prevent and manage zoonotic pathogen spillover. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180342. PMID 31401951 DOI: 10.1098/Rstb.2018.0342  0.333
2019 Pepin KM, Pedersen K, Wan XF, Cunningham FL, Webb CT, Wilber MQ. Individual-level antibody dynamics reveal potential drivers of influenza A seasonality in wild pig populations. Integrative and Comparative Biology. PMID 31251341 DOI: 10.1093/Icb/Icz118  0.315
2019 Miller RS, Pepin KM. Prospects for improving management of animal disease introductions using disease-dynamic models. Journal of Animal Science. PMID 30976799 DOI: 10.1093/Jas/Skz125  0.33
2019 Pepin K. Spatial dynamics of transmission and persistence of African swine fever in wild boar populations: insight for control Frontiers in Veterinary Science. 6. DOI: 10.3389/Conf.Fvets.2019.05.00009  0.351
2019 Pepin KM, Wolfson DW, Miller RS, Tabak MA, Snow NP, VerCauteren KC, Davis AJ. Accounting for heterogeneous invasion rates reveals management impacts on the spatial expansion of an invasive species Ecosphere. 10: e02657. DOI: 10.1002/Ecs2.2657  0.3
2018 Snow NP, Lavelle MJ, Halseth JM, Glow MP, VanNatta EH, Davis AJ, Pepin KM, Tabor RT, Leland BR, Staples LD, VerCauteren KC. Exposure of a Population of Invasive Wild Pigs to Simulated Toxic Bait containing Biomarker: Implications for Population Reduction. Pest Management Science. PMID 30324708 DOI: 10.1002/Ps.5235  0.309
2018 Davis AJ, Leland B, Bodenchuk M, VerCauteren KC, Pepin KM. Costs and effectiveness of damage management of an overabundant species (Sus scrofa) using aerial gunning Wildlife Research. 45: 696-705. DOI: 10.1071/Wr17170  0.334
2017 Pepin KM, Davis AJ, Cunningham FL, VerCauteren KC, Eckery DC. Potential effects of incorporating fertility control into typical culling regimes in wild pig populations. Plos One. 12: e0183441. PMID 28837610 DOI: 10.1371/Journal.Pone.0183441  0.367
2017 Pepin KM, Davis AJ, Streicker DG, Fischer JW, VerCauteren KC, Gilbert AT. Predicting spatial spread of rabies in skunk populations using surveillance data reported by the public. Plos Neglected Tropical Diseases. 11: e0005822. PMID 28759576 DOI: 10.1371/Journal.Pntd.0005822  0.368
2017 Davis AJ, Leland B, Bodenchuk M, VerCauteren KC, Pepin KM. Estimating population density for disease risk assessment: The importance of understanding the area of influence of traps using wild pigs as an example. Preventive Veterinary Medicine. 141: 33-37. PMID 28532991 DOI: 10.1016/J.Prevetmed.2017.04.004  0.362
2017 Pepin KM, Kay SL, Golas BD, Shriner SS, Gilbert AT, Miller RS, Graham AL, Riley S, Cross PC, Samuel MD, Hooten MB, Hoeting JA, Lloyd-Smith JO, Webb CT, Buhnerkempe MG. Inferring infection hazard in wildlife populations by linking data across individual and population scales. Ecology Letters. PMID 28090753 DOI: 10.1111/Ele.12732  0.398
2017 Pepin KM, Davis AJ, VerCauteren KC. Efficiency of different spatial and temporal strategies for reducing vertebrate pest populations Ecological Modelling. 365: 106-118. DOI: 10.1016/J.Ecolmodel.2017.10.005  0.394
2017 Davis AJ, McCreary R, Psiropoulos J, Brennan G, Cox T, Partin A, Pepin KM. Quantifying site-level usage and certainty of absence for an invasive species through occupancy analysis of camera-trap data Biological Invasions. 20: 877-890. DOI: 10.1007/S10530-017-1579-X  0.361
2016 Davis AJ, Hooten MB, Miller RS, Farnsworth ML, Lewis J, Moxcey M, Pepin KM. Inferring invasive species abundance using removal data from management actions. Ecological Applications : a Publication of the Ecological Society of America. 26: 2339-2346. PMID 27755739 DOI: 10.1002/Eap.1383  0.356
2016 Walter KS, Pepin KM, Webb CT, Gaff HD, Krause PJ, Pitzer VE, Diuk-Wasser MA. Invasion of two tick-borne diseases across New England: harnessing human surveillance data to capture underlying ecological invasion processes. Proceedings. Biological Sciences / the Royal Society. 283. PMID 27252022 DOI: 10.1098/Rspb.2016.0834  0.389
2016 Pepin KM, Davis AJ, Beasley J, Boughton R, Campbell T, Cooper SM, Gaston W, Hartley S, Kilgo JC, Wisely SM, Wyckoff C, Vercauteren KC. Contact heterogeneities in feral swine: Implications for disease management and future research Ecosphere. 7. DOI: 10.1002/Ecs2.1230  0.334
2015 Pepin KM, Leach CB, Marques-Toledo C, Laass KH, Paixao KS, Luis AD, Hayman DT, Johnson NG, Buhnerkempe MG, Carver S, Grear DA, Tsao K, Eiras AE, Webb CT. Utility of mosquito surveillance data for spatial prioritization of vector control against dengue viruses in three Brazilian cities. Parasites & Vectors. 8: 98. PMID 25889533 DOI: 10.1186/S13071-015-0659-Y  0.357
2014 Russell CA, Kasson PM, Donis RO, Riley S, Dunbar J, Rambaut A, Asher J, Burke S, Davis CT, Garten RJ, Gnanakaran S, Hay SI, Herfst S, Lewis NS, Lloyd-Smith JO, ... ... Pepin KM, et al. Improving pandemic influenza risk assessment. Elife. 3: e03883. PMID 25321142 DOI: 10.7554/Elife.03883  0.302
2014 O'Dea EB, Pepin KM, Lopman BA, Wilke CO. Fitting outbreak models to data from many small norovirus outbreaks. Epidemics. 6: 18-29. PMID 24593918 DOI: 10.1016/J.Epidem.2013.12.002  0.341
2014 Pepin KM, Spackman E, Brown JD, Pabilonia KL, Garber LP, Weaver JT, Kennedy DA, Patyk KA, Huyvaert KP, Miller RS, Franklin AB, Pedersen K, Bogich TL, Rohani P, Shriner SA, et al. Using quantitative disease dynamics as a tool for guiding response to avian influenza in poultry in the United States of America. Preventive Veterinary Medicine. 113: 376-97. PMID 24462191 DOI: 10.1016/J.Prevetmed.2013.11.011  0.417
2013 Pepin KM, Lloyd-Smith JO, Webb CT, Holcomb K, Zhu H, Guan Y, Riley S. Minimizing the threat of pandemic emergence from avian influenza in poultry systems. Bmc Infectious Diseases. 13: 592. PMID 24341669 DOI: 10.1186/1471-2334-13-592  0.337
2013 George DB, Webb CT, Pepin KM, Savage LT, Antolini MF. Persistence of black-tailed prairie-dog populations affected by plague in northern Colorado, USA. Ecology. 94: 1572-83. PMID 23951717 DOI: 10.1890/12-0719.1  0.348
2013 Pepin KM, Wang J, Webb CT, Hoeting JA, Poss M, Hudson PJ, Hong W, Zhu H, Guan Y, Riley S. Anticipating the prevalence of avian influenza subtypes H9 and H5 in live-bird markets. Plos One. 8: e56157. PMID 23409145 DOI: 10.1371/Journal.Pone.0056157  0.314
2013 Pepin KM, Riley S, Grenfell BT. Effects of influenza antivirals on individual and population immunity over many epidemic waves. Epidemiology and Infection. 141: 366-76. PMID 22459665 DOI: 10.1017/S0950268812000477  0.314
2013 Pepin KM, Wang J, Webb CT, Smith GJ, Poss M, Hudson PJ, Hong W, Zhu H, Riley S, Guan Y. Multiannual patterns of influenza A transmission in Chinese live bird market systems. Influenza and Other Respiratory Viruses. 7: 97-107. PMID 22458429 DOI: 10.1111/J.1750-2659.2012.00354.X  0.367
2013 Abdo Z, Stein M, Wojtowicz A, Pepin KM. The ABCs of Experimental Evolution Isrn Computational Biology. 2013: 1-7. DOI: 10.1155/2013/467943  0.352
2012 Pepin KM, VanDalen KK, Mooers NL, Ellis JW, Sullivan HJ, Root JJ, Webb CT, Franklin AB, Shriner SA. Quantification of heterosubtypic immunity between avian influenza subtypes H3N8 and H4N6 in multiple avian host species. The Journal of General Virology. 93: 2575-83. PMID 22956733 DOI: 10.1099/Vir.0.045427-0  0.4
2012 Pepin KM, Eisen RJ, Mead PS, Piesman J, Fish D, Hoen AG, Barbour AG, Hamer S, Diuk-Wasser MA. Geographic variation in the relationship between human Lyme disease incidence and density of infected host-seeking Ixodes scapularis nymphs in the Eastern United States. The American Journal of Tropical Medicine and Hygiene. 86: 1062-71. PMID 22665620 DOI: 10.4269/Ajtmh.2012.11-0630  0.365
2010 Pepin KM, Lass S, Pulliam JR, Read AF, Lloyd-Smith JO. Identifying genetic markers of adaptation for surveillance of viral host jumps. Nature Reviews. Microbiology. 8: 802-13. PMID 20938453 DOI: 10.1038/Nrmicro2440  0.383
2010 Pepin KM, Volkov I, Banavar JR, Wilke CO, Grenfell BT. Phenotypic differences in viral immune escape explained by linking within-host dynamics to host-population immunity. Journal of Theoretical Biology. 265: 501-10. PMID 20570681 DOI: 10.1016/J.Jtbi.2010.05.036  0.349
2010 Steinmeyer SH, Wilke CO, Pepin KM. Methods of modelling viral disease dynamics across the within- and between-host scales: the impact of virus dose on host population immunity. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 1931-41. PMID 20478888 DOI: 10.1098/Rstb.2010.0065  0.397
2010 Volkov I, Pepin KM, Lloyd-Smith JO, Banavar JR, Grenfell BT. Synthesizing within-host and population-level selective pressures on viral populations: the impact of adaptive immunity on viral immune escape. Journal of the Royal Society, Interface / the Royal Society. 7: 1311-8. PMID 20335194 DOI: 10.1098/Rsif.2009.0560  0.37
2009 Lloyd-Smith JO, George D, Pepin KM, Pitzer VE, Pulliam JR, Dobson AP, Hudson PJ, Grenfell BT. Epidemic dynamics at the human-animal interface. Science (New York, N.Y.). 326: 1362-7. PMID 19965751 DOI: 10.1126/Science.1177345  0.365
2008 Pepin KM, Domsic J, McKenna R. Genomic evolution in a virus under specific selection for host recognition. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 8: 825-34. PMID 18804189 DOI: 10.1016/J.Meegid.2008.08.008  0.443
2008 Pepin KM, Wichman HA. Experimental evolution and genome sequencing reveal variation in levels of clonal interference in large populations of bacteriophage phiX174. Bmc Evolutionary Biology. 8: 85. PMID 18366653 DOI: 10.1186/1471-2148-8-85  0.632
2008 Pepin KM, Lambeth K, Hanley KA. Asymmetric competitive suppression between strains of dengue virus. Bmc Microbiology. 8: 28. PMID 18261207 DOI: 10.1186/1471-2180-8-28  0.317
2007 Pepin KM, Wichman HA. Variable epistatic effects between mutations at host recognition sites in phiX174 bacteriophage. Evolution; International Journal of Organic Evolution. 61: 1710-24. PMID 17598750 DOI: 10.1111/J.1558-5646.2007.00143.X  0.607
2006 Pepin KM, Samuel MA, Wichman HA. Variable pleiotropic effects from mutations at the same locus hamper prediction of fitness from a fitness component. Genetics. 172: 2047-56. PMID 16361237 DOI: 10.1534/Genetics.105.049817  0.625
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