Year |
Citation |
Score |
2015 |
Bahar AA, Liu Z, Garafalo M, Kallenbach N, Ren D. Controlling Persister and Biofilm Cells of Gram-Negative Bacteria with a New 1,3,5-Triazine Derivative. Pharmaceuticals (Basel, Switzerland). 8: 696-710. PMID 26473884 DOI: 10.3390/Ph8040696 |
0.407 |
|
2015 |
Bahar AA, Liu Z, Totsingan F, Buitrago C, Kallenbach N, Ren D. Synthetic dendrimeric peptide active against biofilm and persister cells of Pseudomonas aeruginosa. Applied Microbiology and Biotechnology. 99: 8125-35. PMID 26012420 DOI: 10.1007/S00253-015-6645-7 |
0.437 |
|
2014 |
Xiao X, Kallenbach N, Zhang Y. Peptide Conformation Analysis Using an Integrated Bayesian Approach. Journal of Chemical Theory and Computation. 10: 4152-4159. PMID 25221447 DOI: 10.1021/Ct500433D |
0.424 |
|
2014 |
Miller SE, Watkins AM, Kallenbach NR, Arora PS. Effects of side chains in helix nucleation differ from helix propagation. Proceedings of the National Academy of Sciences of the United States of America. 111: 6636-41. PMID 24753597 DOI: 10.1073/Pnas.1322833111 |
0.44 |
|
2013 |
Vanderlee G, Liu Z, Kallenbach NR, Yip CM. Action of Arginine and Tryptophan Containing Antimicrobial Peptides on Supported Lipid Bilayers Biophysical Journal. 104: 236a. DOI: 10.1016/J.Bpj.2012.11.1335 |
0.439 |
|
2013 |
Vanderlee G, Liu Z, Kallenbach NR, Yip CM. Action of Arginine and Tryptophan Containing Antimicrobial Peptides on Supported Lipid Bilayers Biophysical Journal. 104: 236a. DOI: 10.1016/j.bpj.2012.11.1335 |
0.371 |
|
2012 |
Kallenbach NR, Dominguez R. Dystrophin's tandem calponin-homology domains: is the case closed? Biophysical Journal. 103: 1818-9. PMID 23199908 DOI: 10.1016/J.Bpj.2012.09.037 |
0.343 |
|
2012 |
Miller SE, Kallenbach NR, Arora PS. Reversible α-helix formation controlled by a hydrogen bond surrogate. Tetrahedron. 68: 4434-4437. PMID 23144512 DOI: 10.1016/J.Tet.2011.12.068 |
0.36 |
|
2012 |
He L, Navarro AE, Shi Z, Kallenbach NR. End effects influence short model peptide conformation. Journal of the American Chemical Society. 134: 1571-6. PMID 22176215 DOI: 10.1021/Ja2070363 |
0.731 |
|
2012 |
Liu Z, Cai Y, Young AW, Totsingan F, Jiwrajka N, Shi Z, Kallenbach NR. OH radical production stimulated by (RW)4D, a synthetic antimicrobial agent and indolicidin Medchemcomm. 3: 1548-1554. DOI: 10.1039/C2Md20272G |
0.56 |
|
2011 |
Chen X, Zhang M, Zhou C, Kallenbach NR, Ren D. Control of bacterial persister cells by Trp/Arg-containing antimicrobial peptides. Applied and Environmental Microbiology. 77: 4878-85. PMID 21622798 DOI: 10.1128/Aem.02440-10 |
0.524 |
|
2011 |
Shi Z, Kallenbach NR. Ramachandran redux. Proceedings of the National Academy of Sciences of the United States of America. 108: 3-4. PMID 21178075 DOI: 10.1073/Pnas.1017021108 |
0.565 |
|
2011 |
Young AW, Liu Z, Zhou C, Totsingan F, Jiwrajka N, Shi Z, Kallenbach NR. Structure and antimicrobial properties of multivalent short peptides Medchemcomm. 2: 308-314. DOI: 10.1039/C0Md00247J |
0.665 |
|
2011 |
Shi Z, Zhou C, Liu Z, Totsingan F, Kallenbach NR. Amino Acid-Based Dendrimers Amino Acids, Peptides and Proteins in Organic Chemistry. 4: 491-517. DOI: 10.1002/9783527631827.ch15 |
0.599 |
|
2010 |
Hou S, Liu Z, Young AW, Mark SL, Kallenbach NR, Ren D. Effects of Trp- and Arg-containing antimicrobial-peptide structure on inhibition of Escherichia coli planktonic growth and biofilm formation. Applied and Environmental Microbiology. 76: 1967-74. PMID 20097816 DOI: 10.1128/Aem.02321-09 |
0.466 |
|
2010 |
Totsingan F, Jain V, Bracken WC, Faccini A, Tedeschi T, Marchelli R, Corradini R, Kallenbach NR, Green MM. Conformational heterogeneity in PNA:PNA duplexes Macromolecules. 43: 2692-2703. DOI: 10.1021/Ma902797F |
0.387 |
|
2009 |
Hou S, Zhou C, Liu Z, Young AW, Shi Z, Ren D, Kallenbach NR. Antimicrobial dendrimer active against Escherichia coli biofilms. Bioorganic & Medicinal Chemistry Letters. 19: 5478-81. PMID 19682902 DOI: 10.1016/J.Bmcl.2009.07.077 |
0.648 |
|
2009 |
Stoddard E, Ni H, Cannon G, Zhou C, Kallenbach N, Malamud D, Weissman D. gp340 promotes transcytosis of human immunodeficiency virus type 1 in genital tract-derived cell lines and primary endocervical tissue. Journal of Virology. 83: 8596-603. PMID 19553331 DOI: 10.1128/Jvi.00744-09 |
0.431 |
|
2009 |
Chen K, Liu Z, Zhou C, Bracken WC, Kallenbach NR. Extended conformations in alanine peptides Biophysical Journal. 96: 4a-5a. DOI: 10.1016/J.Bpj.2008.12.916 |
0.693 |
|
2008 |
Bell AJ, Chauhan S, Woodson SA, Kallenbach NR. Interactions of recombinant HMGB proteins with branched RNA substrates. Biochemical and Biophysical Research Communications. 377: 262-7. PMID 18845125 DOI: 10.1016/J.Bbrc.2008.09.131 |
0.356 |
|
2008 |
Deng Y, Liu J, Zheng Q, Li Q, Kallenbach NR, Lu M. A heterospecific leucine zipper tetramer. Chemistry & Biology. 15: 908-19. PMID 18804028 DOI: 10.1016/J.Chembiol.2008.07.008 |
0.407 |
|
2008 |
Chapman R, Kulp JL, Patgiri A, Kallenbach NR, Bracken C, Arora PS. Trapping a folding intermediate of the alpha-helix: stabilization of the pi-helix. Biochemistry. 47: 4189-95. PMID 18335996 DOI: 10.1021/Bi800136M |
0.38 |
|
2008 |
Zhou C, Min J, Liu Z, Young A, Deshazer H, Gao T, Chang YT, Kallenbach NR. Synthesis and biological evaluation of novel 1,3,5-triazine derivatives as antimicrobial agents. Bioorganic & Medicinal Chemistry Letters. 18: 1308-11. PMID 18226902 DOI: 10.1016/J.Bmcl.2008.01.031 |
0.569 |
|
2007 |
Liu J, Zheng Q, Deng Y, Li Q, Kallenbach NR, Lu M. Conformational specificity of the lac repressor coiled-coil tetramerization domain. Biochemistry. 46: 14951-9. PMID 18052214 DOI: 10.1021/Bi701930D |
0.436 |
|
2007 |
Chen K, Liu Z, Zhou C, Bracken WC, Kallenbach NR. Spin relaxation enhancement confirms dominance of extended conformations in short alanine peptides. Angewandte Chemie (International Ed. in English). 46: 9036-9. PMID 17943945 DOI: 10.1002/Anie.200703376 |
0.641 |
|
2007 |
Liu Z, Young AW, Hu P, Rice AJ, Zhou C, Zhang Y, Kallenbach NR. Tuning the membrane selectivity of antimicrobial peptides by using multivalent design. Chembiochem : a European Journal of Chemical Biology. 8: 2063-5. PMID 17924379 DOI: 10.1002/Cbic.200700502 |
0.556 |
|
2007 |
Deng Y, Zheng Q, Liu J, Cheng CS, Kallenbach NR, Lu M. Self-assembly of coiled-coil tetramers in the 1.40 A structure of a leucine-zipper mutant. Protein Science : a Publication of the Protein Society. 16: 323-8. PMID 17189475 DOI: 10.1110/Ps.062590807 |
0.359 |
|
2007 |
Liu Z, Brady A, Young A, Rasimick B, Chen K, Zhou C, Kallenbach NR. Length effects in antimicrobial peptides of the (RW)n series. Antimicrobial Agents and Chemotherapy. 51: 597-603. PMID 17145799 DOI: 10.1128/Aac.00828-06 |
0.671 |
|
2006 |
Liu J, Deng Y, Zheng Q, Cheng CS, Kallenbach NR, Lu M. A parallel coiled-coil tetramer with offset helices. Biochemistry. 45: 15224-31. PMID 17176044 DOI: 10.1021/Bi061914M |
0.448 |
|
2006 |
Liu J, Zheng Q, Deng Y, Cheng CS, Kallenbach NR, Lu M. A seven-helix coiled coil. Proceedings of the National Academy of Sciences of the United States of America. 103: 15457-62. PMID 17030805 DOI: 10.1073/Pnas.0604871103 |
0.407 |
|
2006 |
Liu J, Zheng Q, Deng Y, Kallenbach NR, Lu M. Conformational transition between four and five-stranded phenylalanine zippers determined by a local packing interaction. Journal of Molecular Biology. 361: 168-79. PMID 16828114 DOI: 10.1016/J.Jmb.2006.05.063 |
0.442 |
|
2006 |
Liu Z, Deshazer H, Rice AJ, Chen K, Zhou C, Kallenbach NR. Multivalent antimicrobial peptides from a reactive polymer scaffold. Journal of Medicinal Chemistry. 49: 3436-9. PMID 16759083 DOI: 10.1021/Jm0601452 |
0.649 |
|
2006 |
Shi Z, Chen K, Liu Z, Kallenbach NR. Conformation of the backbone in unfolded proteins. Chemical Reviews. 106: 1877-97. PMID 16683759 DOI: 10.1021/Cr040433A |
0.661 |
|
2006 |
Deng Y, Liu J, Zheng Q, Eliezer D, Kallenbach NR, Lu M. Antiparallel four-stranded coiled coil specified by a 3-3-1 hydrophobic heptad repeat. Structure (London, England : 1993). 14: 247-55. PMID 16472744 DOI: 10.1016/J.Str.2005.10.010 |
0.396 |
|
2006 |
Shi Z, Chen K, Liu Z, Sosnick TR, Kallenbach NR. PII structure in the model peptides for unfolded proteins: studies on ubiquitin fragments and several alanine-rich peptides containing QQQ, SSS, FFF, and VVV. Proteins. 63: 312-21. PMID 16362932 DOI: 10.1002/Prot.20788 |
0.71 |
|
2005 |
Shi Z, Chen K, Liu Z, Ng A, Bracken WC, Kallenbach NR. Polyproline II propensities from GGXGG peptides reveal an anticorrelation with beta-sheet scales. Proceedings of the National Academy of Sciences of the United States of America. 102: 17964-8. PMID 16330763 DOI: 10.1073/Pnas.0507124102 |
0.676 |
|
2005 |
Chen K, Liu Z, Zhou C, Shi Z, Kallenbach NR. Neighbor effect on PPII conformation in alanine peptides. Journal of the American Chemical Society. 127: 10146-7. PMID 16028907 DOI: 10.1021/Ja052094O |
0.732 |
|
2005 |
Lee-Huang S, Maiorov V, Huang PL, Ng A, Lee HC, Chang YT, Kallenbach N, Huang PL, Chen HC. Structural and functional modeling of human lysozyme reveals a unique nonapeptide, HL9, with anti-HIV activity. Biochemistry. 44: 4648-55. PMID 15779891 DOI: 10.1021/Bi0477081 |
0.346 |
|
2004 |
Liu Z, Chen K, Ng A, Shi Z, Woody RW, Kallenbach NR. Solvent dependence of PII conformation in model alanine peptides. Journal of the American Chemical Society. 126: 15141-50. PMID 15548011 DOI: 10.1021/Ja047594G |
0.684 |
|
2004 |
Liu J, Yong W, Deng Y, Kallenbach NR, Lu M. Atomic structure of a tryptophan-zipper pentamer. Proceedings of the National Academy of Sciences of the United States of America. 101: 16156-61. PMID 15520380 DOI: 10.1073/Pnas.0405319101 |
0.393 |
|
2004 |
Chen K, Liu Z, Kallenbach NR. The polyproline II conformation in short alanine peptides is noncooperative. Proceedings of the National Academy of Sciences of the United States of America. 101: 15352-7. PMID 15489268 DOI: 10.1073/Pnas.0406657101 |
0.613 |
|
2004 |
McColl IH, Blanch EW, Hecht L, Kallenbach NR, Barron LD. Vibrational Raman optical activity characterization of poly(l-proline) II helix in alanine oligopeptides. Journal of the American Chemical Society. 126: 5076-7. PMID 15099084 DOI: 10.1021/Ja049271Q |
0.385 |
|
2004 |
Cao W, Bracken C, Kallenbach NR, Lu M. Helix formation and the unfolded state of a 52-residue helical protein. Protein Science : a Publication of the Protein Society. 13: 177-89. PMID 14691233 DOI: 10.1110/Ps.03383004 |
0.379 |
|
2003 |
Ding L, Chen K, Santini PA, Shi Z, Kallenbach NR. The pentapeptide GGAGG has PII conformation. Journal of the American Chemical Society. 125: 8092-3. PMID 12837065 DOI: 10.1021/Ja035551E |
0.676 |
|
2002 |
Shi Z, Olson CA, Bell AJ, Kallenbach NR. Non-classical helix-stabilizing interactions: C-H...O H-bonding between Phe and Glu side chains in alpha-helical peptides. Biophysical Chemistry. 101: 267-79. PMID 12488007 DOI: 10.1016/S0301-4622(02)00171-0 |
0.52 |
|
2002 |
Bell AJ, Xin H, Taudte S, Shi Z, Kallenbach NR. Metal-dependent stabilization of an active HMG protein. Protein Engineering. 15: 817-25. PMID 12468716 DOI: 10.1093/Protein/15.10.817 |
0.774 |
|
2002 |
Shi Z, Olson CA, Kallenbach NR, Sosnick TR. D/H amide isotope effect in model alpha-helical peptides. Journal of the American Chemical Society. 124: 13994-5. PMID 12440888 DOI: 10.1021/Ja027740N |
0.551 |
|
2002 |
Shi Z, Woody RW, Kallenbach NR. Is polyproline II a major backbone conformation in unfolded proteins? Advances in Protein Chemistry. 62: 163-240. PMID 12418104 DOI: 10.1016/S0065-3233(02)62008-X |
0.585 |
|
2002 |
Shi Z, Olson CA, Rose GD, Baldwin RL, Kallenbach NR. Polyproline II structure in a sequence of seven alanine residues. Proceedings of the National Academy of Sciences of the United States of America. 99: 9190-5. PMID 12091708 DOI: 10.1073/Pnas.112193999 |
0.606 |
|
2002 |
Shi Z, Olson CA, Kallenbach NR. Cation-pi interaction in model alpha-helical peptides. Journal of the American Chemical Society. 124: 3284-91. PMID 11916412 DOI: 10.1021/Ja0174938 |
0.573 |
|
2002 |
Shi Z, Krantz BA, Kallenbach N, Sosnick TR. Contribution of hydrogen bonding to protein stability estimated from isotope effects. Biochemistry. 41: 2120-9. PMID 11841202 DOI: 10.1021/Bi011307T |
0.526 |
|
2001 |
Shi Z, Olson CA, Bell AJ, Kallenbach NR. Stabilization of alpha-helix structure by polar side-chain interactions: complex salt bridges, cation-pi interactions, and C-H em leader O H-bonds. Biopolymers. 60: 366-80. PMID 12115147 DOI: 10.1002/1097-0282(2001)60:5<366::Aid-Bip10177>3.0.Co;2-5 |
0.574 |
|
2001 |
Taudte S, Xin H, Bell AJ, Kallenbach NR. Interactions between HMG boxes. Protein Engineering. 14: 1015-23. PMID 11809932 DOI: 10.1093/Protein/14.12.1015 |
0.782 |
|
2001 |
Olson CA, Shi Z, Kallenbach NR. Polar interactions with aromatic side chains in alpha-helical peptides: Ch...O H-bonding and cation-pi interactions. Journal of the American Chemical Society. 123: 6451-2. PMID 11427086 DOI: 10.1021/ja015590v |
0.466 |
|
2001 |
Olson CA, Spek EJ, Shi Z, Vologodskii A, Kallenbach NR. Cooperative helix stabilization by complex Arg-Glu salt bridges. Proteins. 44: 123-32. PMID 11391775 DOI: 10.1002/Prot.1079 |
0.583 |
|
2001 |
Kallenbach N. Breaking open a protein barrel Proceedings of the National Academy of Sciences of the United States of America. 98: 2958-2960. PMID 11248013 DOI: 10.1073/Pnas.071051798 |
0.37 |
|
2000 |
Xin H, Taudte S, Kallenbach NR, Limbach MP, Zitomer RS. DNA binding by single HMG box model proteins. Nucleic Acids Research. 28: 4044-50. PMID 11024186 DOI: 10.1093/Nar/28.20.4044 |
0.779 |
|
2000 |
Taudte S, Xin H, Kallenbach NR. Alanine mutagenesis of high-mobility-group-protein-1 box B (HMG1-B). The Biochemical Journal. 347: 807-14. PMID 10769186 DOI: 10.1042/0264-6021:3470807 |
0.781 |
|
1999 |
Lu M, Shu W, Ji H, Spek E, Wang L, Kallenbach NR. Helix capping in the GCN4 leucine zipper. Journal of Molecular Biology. 288: 743-52. PMID 10329176 DOI: 10.1006/Jmbi.1999.2707 |
0.422 |
|
1999 |
Kallenbach NR, Gong Y. C-terminal capping motifs in model helical peptides. Bioorganic & Medicinal Chemistry. 7: 143-51. PMID 10199664 DOI: 10.1016/S0968-0896(98)00231-4 |
0.44 |
|
1999 |
Spek EJ, Olson CA, Shi Z, Kallenbach NR. Alanine is an intrinsic α-helix stabilizing amino acid Journal of the American Chemical Society. 121: 5571-5572. DOI: 10.1021/Ja990056X |
0.498 |
|
1998 |
Wang L, Kallenbach NR. Proteolysis as a measure of the free energy difference between cytochrome c and its derivatives. Protein Science : a Publication of the Protein Society. 7: 2460-4. PMID 9828013 DOI: 10.1002/Pro.5560071124 |
0.306 |
|
1998 |
Spek EJ, Bui AH, Lu M, Kallenbach NR. Surface salt bridges stabilize the GCN4 leucine zipper. Protein Science : a Publication of the Protein Society. 7: 2431-7. PMID 9828010 DOI: 10.1002/Pro.5560071121 |
0.373 |
|
1998 |
Kallenbach NR, Spek EJ. Modified amino acids as probes of helix stability. Methods in Enzymology. 295: 26-41. PMID 9750212 DOI: 10.1016/S0076-6879(98)95033-9 |
0.321 |
|
1998 |
Wang L, Chen RX, Kallenbach NR. Proteolysis as a probe of thermal unfolding of cytochrome c. Proteins. 30: 435-41. PMID 9533627 DOI: 10.1002/(Sici)1097-0134(19980301)30:4<435::Aid-Prot10>3.0.Co;2-J |
0.349 |
|
1998 |
Yang J, Zhao K, Gong Y, Vologodskii A, Kallenbach NR. α-Helix nucleation constant in copolypeptides of alanine and ornithine or lysine Journal of the American Chemical Society. 120: 10646-10652. DOI: 10.1021/Ja982319D |
0.426 |
|
1998 |
Mayne L, Englander SW, Qiu R, Yang J, Gong Y, Spek EJ, Kallenbach NR. Stabilizing effect of a multiple salt bridge in a prenucleated peptide Journal of the American Chemical Society. 120: 10643-10645. DOI: 10.1021/Ja981592C |
0.584 |
|
1997 |
Yang J, Spek EJ, Gong Y, Zhou H, Kallenbach NR. The role of context on alpha-helix stabilization: host-guest analysis in a mixed background peptide model. Protein Science : a Publication of the Protein Society. 6: 1264-72. PMID 9194186 DOI: 10.1002/Pro.5560060614 |
0.446 |
|
1997 |
Gibb CL, Cheng W, Morozov VN, Kallenbach NR. Effect of nuclear protein HMG1 on in vitro slippage synthesis of the tandem repeat dTG x dCA. Biochemistry. 36: 5418-24. PMID 9154923 DOI: 10.1021/Bi962037V |
0.381 |
|
1997 |
Zhong M, Marky LA, Kallenbach NR, Kupke DW. Thermodynamics of dT--dT base pair mismatching in linear DNA duplexes and three-arm DNA junctions. Biochemistry. 36: 2485-91. PMID 9054553 DOI: 10.1021/Bi962373B |
0.368 |
|
1996 |
Berger JS, Ernst JA, Nicoletta AC, Hull LA, Yang J, Qiu R, Morozov VN, Kallenbach NR. Stabilization of helical peptides by mixed spaced salt bridges. Journal of Biomolecular Structure & Dynamics. 14: 285-91. PMID 9016406 DOI: 10.1080/07391102.1996.10508124 |
0.58 |
|
1996 |
Zhao Y, Cheng W, Gibb CL, Gupta G, Kallenbach NR. HMG box proteins interact with multiple tandemly repeated (GCC)n (GGC)m DNA sequences. Journal of Biomolecular Structure & Dynamics. 14: 235-8. PMID 8913860 DOI: 10.1080/07391102.1996.10508113 |
0.412 |
|
1995 |
Guo Q, Lu M, Kallenbach NR. Effect of hemimethylation and methylation of adenine on the structure and stability of model DNA duplexes. Biochemistry. 34: 16359-64. PMID 8845361 DOI: 10.1021/Bi00050A016 |
0.331 |
|
1995 |
Gong Y, Zhou HX, Guo M, Kallenbach NR. Structural analysis of the N- and C-termini in a peptide with consensus sequence. Protein Science : a Publication of the Protein Society. 4: 1446-56. PMID 8520470 DOI: 10.1002/Pro.5560040802 |
0.43 |
|
1995 |
Zhong M, Lin L, Kallenbach NR. A method for probing the topography and interactions of proteins: footprinting of myoglobin. Proceedings of the National Academy of Sciences of the United States of America. 92: 2111-5. PMID 7892233 DOI: 10.1073/Pnas.92.6.2111 |
0.323 |
|
1994 |
Zhou HX, Lyu P, Wemmer DE, Kallenbach NR. Alpha helix capping in synthetic model peptides by reciprocal side chain-main chain interactions: evidence for an N terminal "capping box". Proteins. 18: 1-7. PMID 8146119 DOI: 10.1002/Prot.340180103 |
0.453 |
|
1994 |
Hernández LI, Zhong M, Courtney SH, Marky LA, Kallenbach NR. Equilibrium analysis of ethidium binding to DNA containing base mismatches and branches. Biochemistry. 33: 13140-6. PMID 7947720 DOI: 10.1021/Bi00248A025 |
0.372 |
|
1994 |
Seeman NC, Kallenbach NR. DNA branched junctions. Annual Review of Biophysics and Biomolecular Structure. 23: 53-86. PMID 7919792 DOI: 10.1146/Annurev.Bb.23.060194.000413 |
0.301 |
|
1994 |
Lin L, Pinker RJ, Phillips GN, Kallenbach NR. Stabilization of myoglobin by multiple alanine substitutions in helical positions. Protein Science : a Publication of the Protein Society. 3: 1430-5. PMID 7833805 DOI: 10.1002/Pro.5560030909 |
0.377 |
|
1994 |
Lin L, Pinker RJ, Forde K, Rose GD, Kallenbach NR. Molten globular characteristics of the native state of apomyoglobin. Nature Structural Biology. 1: 447-52. PMID 7664063 DOI: 10.1038/Nsb0794-447 |
0.363 |
|
1994 |
Zhong M, Kallenbach NR. Mapping tRNA and 5S RNA tertiary structures by charge dependent Fe(II)-catalyzed cleavage. Journal of Biomolecular Structure & Dynamics. 11: 901-11. PMID 7515624 DOI: 10.1080/07391102.1994.10508040 |
0.312 |
|
1993 |
Zhong M, Kallenbach NR. Conformation and thermodynamics of DNA "necks". Models for three-arm branch formation in a duplex. Journal of Molecular Biology. 230: 766-78. PMID 8478932 DOI: 10.1006/Jmbi.1993.1199 |
0.381 |
|
1993 |
Guo Q, Lu M, Kallenbach NR. Effect of thymine tract length on the structure and stability of model telomeric sequences. Biochemistry. 32: 3596-603. PMID 8466901 DOI: 10.1021/Bi00065A010 |
0.373 |
|
1993 |
Lu M, Guo Q, Kallenbach NR. Thermodynamics of G-tetraplex formation by telomeric DNAs. Biochemistry. 32: 598-601. PMID 8422371 DOI: 10.1021/Bi00053A027 |
0.376 |
|
1993 |
Lyu PC, Wemmer DE, Zhou HX, Pinker RJ, Kallenbach NR. Capping interactions in isolated alpha helices: position-dependent substitution effects and structure of a serine-capped peptide helix. Biochemistry. 32: 421-5. PMID 8422351 DOI: 10.1021/Bi00053A006 |
0.464 |
|
1993 |
Morozov VN, Sherman J, Kallenbach NR, Du SM, Seeman NC. A scanning tunnelling microscopy study of the formation and chemical activation of step defects on the basal plane of pyrolytic graphite. Journal of Microscopy. 170: 237-45. PMID 8396646 DOI: 10.1111/J.1365-2818.1993.Tb03347.X |
0.459 |
|
1993 |
Gupta G, Garcia AE, Guo Q, Lu M, Kallenbach NR. Structure of a parallel-stranded tetramer of the Oxytricha telomeric DNA sequence dT4G4. Biochemistry. 32: 7098-103. PMID 8393704 DOI: 10.1021/Bi00079A005 |
0.381 |
|
1993 |
Pinker RJ, Lin L, Rose GD, Kallenbach NR. Effects of alanine substitutions in alpha-helices of sperm whale myoglobin on protein stability. Protein Science : a Publication of the Protein Society. 2: 1099-105. PMID 8358293 DOI: 10.1002/Pro.5560020704 |
0.425 |
|
1993 |
Zhong M, Rashes MS, Kallenbach NR. Effect of T-T base mismatches on three-arm DNA junctions. Biochemistry. 32: 6898-907. PMID 8334121 DOI: 10.1021/Bi00078A013 |
0.357 |
|
1993 |
Lin L, Pinker RJ, Kallenbach NR. Alpha-helix stability and the native state of myoglobin. Biochemistry. 32: 12638-43. PMID 8251481 DOI: 10.1021/Bi00210A011 |
0.441 |
|
1993 |
Pinker RJ, Kallenbach NR, Rose GD. Effect of alanine substitutions in alpha helices of sperm whale myoglobin on stability of the native protein Protein Engineering Design & Selection. 6. DOI: 10.1093/Protein/6.Supplement.21-B |
0.322 |
|
1992 |
Lyu PC, Gans PJ, Kallenbach NR. Energetic contribution of solvent-exposed ion pairs to alpha-helix structure. Journal of Molecular Biology. 223: 343-50. PMID 1731079 DOI: 10.1016/0022-2836(92)90735-3 |
0.469 |
|
1992 |
Lu M, Guo Q, Kallenbach NR. Interaction of drugs with branched DNA structures. Critical Reviews in Biochemistry and Molecular Biology. 27: 157-90. PMID 1587142 DOI: 10.3109/10409239209082562 |
0.312 |
|
1992 |
Lu M, Guo Q, Kallenbach NR, Sheardy RD. Conformational properties of B-Z junctions in DNA. Biochemistry. 31: 4712-9. PMID 1581320 DOI: 10.1021/Bi00134A026 |
0.361 |
|
1992 |
Guo Q, Lu M, Marky LA, Kallenbach NR. Interaction of the dye ethidium bromide with DNA containing guanine repeats. Biochemistry. 31: 2451-5. PMID 1547228 DOI: 10.1021/Bi00124A002 |
0.335 |
|
1992 |
Lu M, Guo Q, Marky LA, Seeman NC, Kallenbach NR. Thermodynamics of DNA branching. Journal of Molecular Biology. 223: 781-9. PMID 1542118 DOI: 10.1016/0022-2836(92)90989-W |
0.38 |
|
1992 |
Zhong M, Rashes MS, Marky LA, Kallenbach NR. T-T base mismatches enhance drug binding at the branch site in a four-arm DNA junction. Biochemistry. 31: 8064-71. PMID 1510989 DOI: 10.1021/Bi00149A042 |
0.347 |
|
1991 |
Lyu PC, Sherman JC, Chen A, Kallenbach NR. Alpha-helix stabilization by natural and unnatural amino acids with alkyl side chains. Proceedings of the National Academy of Sciences of the United States of America. 88: 5317-20. PMID 2052608 DOI: 10.1073/Pnas.88.12.5317 |
0.565 |
|
1991 |
Lu M, Guo Q, Kallenbach NR. Effect of sequence on the structure of three-arm DNA junctions. Biochemistry. 30: 5815-20. PMID 2043622 DOI: 10.1021/Bi00238A001 |
0.356 |
|
1991 |
Lu M, Guo Q, Seeman NC, Kallenbach NR. Parallel and antiparallel Holliday junctions differ in structure and stability. Journal of Molecular Biology. 221: 1419-32. PMID 1942060 DOI: 10.1016/0022-2836(91)90942-Y |
0.362 |
|
1991 |
Guo Q, Lu M, Kallenbach NR. Conformational preference and ligand binding properties of DNA junctions are determined by sequence at the branch. Biopolymers. 31: 359-72. PMID 1907507 DOI: 10.1002/Bip.360310402 |
0.39 |
|
1991 |
Gans PJ, Lyu PC, Manning MC, Woody RW, Kallenbach NR. The helix-coil transition in heterogeneous peptides with specific side-chain interactions: theory and comparison with CD spectral data. Biopolymers. 31: 1605-14. PMID 1814507 DOI: 10.1002/Bip.360311315 |
0.443 |
|
1991 |
Lu M, Guo Q, Krishnan B, Golik J, Rosenberg IE, Doyle TW, Kallenbach NR. Determination of DNA cleavage specificity by esperamicins. Journal of Biomolecular Structure & Dynamics. 9: 285-98. PMID 1741964 DOI: 10.1080/07391102.1991.10507913 |
0.364 |
|
1991 |
Lu M, Guo Q, Kallenbach NR. Site-specific interaction of the antitumor antibiotic dynemicin with branched DNA molecules. Journal of Biomolecular Structure & Dynamics. 9: 271-83. PMID 1741963 DOI: 10.1080/07391102.1991.10507912 |
0.367 |
|
1991 |
Guo Q, Lu M, Shahrestanifar M, Sheardy RD, Kallenbach NR. Drug binding to a DNA BZ molecule: analysis by chemical footprinting. Biochemistry. 30: 11735-41. PMID 1721536 DOI: 10.1021/Bi00115A001 |
0.349 |
|
1991 |
Lyu PC, Wang PC, Liff MI, Kallenbach NR. Local effect of glycine substitution in a model helical peptide Journal of the American Chemical Society. 113: 3568-3572. DOI: 10.1021/Ja00009A052 |
0.448 |
|
1991 |
Liff MI, Lyu PC, Kallenbach NR. Analysis of asymmetry in the distribution of helical residues in peptides by 1H nuclear magnetic resonance Journal of the American Chemical Society. 113: 1014-1019. DOI: 10.1021/Ja00003A041 |
0.324 |
|
1990 |
Lu M, Guo Q, Pasternack RF, Wink DJ, Seeman NC, Kallenbach NR. Drug binding by branched DNA: selective interaction of tetrapyridyl porphyrins with an immobile junction. Biochemistry. 29: 1614-24. PMID 2334721 DOI: 10.1021/Bi00458A037 |
0.315 |
|
1990 |
Kallenbach NR, Lu M, Vasant Kumar N, Nelson JW. Distribution of charged residues stabilizes individual helices in myoglobins. Journal of Biomolecular Structure & Dynamics. 7: 973-83. PMID 2310526 DOI: 10.1080/07391102.1990.10508536 |
0.4 |
|
1990 |
Lyu PC, Liff MI, Marky LA, Kallenbach NR. Side chain contributions to the stability of alpha-helical structure in peptides. Science (New York, N.Y.). 250: 669-73. PMID 2237416 DOI: 10.1126/Science.2237416 |
0.432 |
|
1990 |
Guo Q, Lu M, Churchill ME, Tullius TD, Kallenbach NR. Asymmetric structure of a three-arm DNA junction. Biochemistry. 29: 10927-34. PMID 2176888 DOI: 10.1021/Bi00501A010 |
0.359 |
|
1990 |
Lu M, Guo Q, Seeman NC, Kallenbach NR. Drug binding by branched DNA: selective interaction of the dye stains-all with an immobile junction. Biochemistry. 29: 3407-12. PMID 2110476 DOI: 10.1021/Bi00465A038 |
0.343 |
|
1990 |
Guo Q, Lu M, Seeman NC, Kallenbach NR. Drug binding by branched DNA molecules: analysis by chemical footprinting of intercalation into an immobile junction. Biochemistry. 29: 570-8. PMID 2105745 DOI: 10.1021/Bi00454A034 |
0.332 |
|
1989 |
Seeman NC, Chen JH, Kallenbach NR. Gel electrophoretic analysis of DNA branched junctions. Electrophoresis. 10: 345-54. PMID 2548837 DOI: 10.1002/Elps.1150100512 |
0.381 |
|
1989 |
Nelson JW, Kallenbach NR. Persistence of the alpha-helix stop signal in the S-peptide in trifluoroethanol solutions. Biochemistry. 28: 5256-61. PMID 2548607 DOI: 10.1021/Bi00438A050 |
0.384 |
|
1989 |
Guo Q, Seeman NC, Kallenbach NR. Site-specific interaction of intercalating drugs with a branched DNA molecule. Biochemistry. 28: 2355-9. PMID 2543439 DOI: 10.1021/Bi00432A001 |
0.353 |
|
1989 |
Chen JH, Kallenbach NR, Seeman NC. A specific quadrilateral synthesized from DNA branched junctions Journal of the American Chemical Society. 111: 6402-6407. DOI: 10.1021/Ja00198A063 |
0.315 |
|
1989 |
Lyu PC, Marky LA, Kallenbach NR. The role of ion pairs in α-helix stability: Two new designed helical peptides Journal of the American Chemical Society. 111: 2733-2734. DOI: 10.1021/Ja00189A067 |
0.342 |
|
1988 |
Chen JH, Seeman NC, Kallenbach NR. Tracts of A.T base pairs retard the electrophoretic mobility of short DNA duplexes. Nucleic Acids Research. 16: 6803-12. PMID 3405750 DOI: 10.1093/Nar/16.14.6803 |
0.342 |
|
1988 |
Churchill ME, Tullius TD, Kallenbach NR, Seeman NC. A Holliday recombination intermediate is twofold symmetric. Proceedings of the National Academy of Sciences of the United States of America. 85: 4653-6. PMID 3387432 DOI: 10.1073/Pnas.85.13.4653 |
0.381 |
|
1988 |
Kumar NV, Wemmer DE, Kallenbach NR. Structure of P401 (mast cell degranulating peptide) in solution. Biophysical Chemistry. 31: 113-9. PMID 3233281 DOI: 10.1016/0301-4622(88)80015-2 |
0.383 |
|
1988 |
Petrillo ML, Newton CJ, Cunningham RP, Ma RI, Kallenbach NR, Seeman NC. The ligation and flexibility of four-arm DNA junctions. Biopolymers. 27: 1337-52. PMID 3219399 DOI: 10.1002/Bip.360270902 |
0.384 |
|
1988 |
Mueller JE, Kemper B, Cunningham RP, Kallenbach NR, Seeman NC. T4 endonuclease VII cleaves the crossover strands of Holliday junction analogs. Proceedings of the National Academy of Sciences of the United States of America. 85: 9441-5. PMID 3200829 DOI: 10.1073/Pnas.85.24.9441 |
0.344 |
|
1988 |
Chen JH, Churchill ME, Tullius TD, Kallenbach NR, Seeman NC. Construction and analysis of monomobile DNA junctions. Biochemistry. 27: 6032-8. PMID 3191106 DOI: 10.1021/Bi00416A031 |
0.357 |
|
1987 |
Marky LA, Kallenbach NR, McDonough KA, Seeman NC, Breslauer KJ. The melting behavior of a DNA junction structure: a calorimetric and spectroscopic study. Biopolymers. 26: 1621-34. PMID 3663876 DOI: 10.1002/Bip.360260912 |
0.331 |
|
1986 |
Ma RI, Kallenbach NR, Sheardy RD, Petrillo ML, Seeman NC. Three-arm nucleic acid junctions are flexible. Nucleic Acids Research. 14: 9745-53. PMID 3808954 DOI: 10.1093/Nar/14.24.9745 |
0.361 |
|
1986 |
Nelson JW, Kallenbach NR. Stabilization of the ribonuclease S-peptide alpha-helix by trifluoroethanol. Proteins. 1: 211-7. PMID 3449856 DOI: 10.1002/Prot.340010303 |
0.376 |
|
1986 |
Wemmer DE, Kumar NV, Metrione RM, Lazdunski M, Drobny G, Kallenbach NR. NMR analysis and sequence of toxin II from the sea anemone Radianthus paumotensis. Biochemistry. 25: 6842-9. PMID 2879552 DOI: 10.1021/Bi00370A017 |
0.369 |
|
1983 |
Wemmer D, Kallenbach NR. Structure of apamin in solution: a two-dimensional nuclear magnetic resonance study. Biochemistry. 22: 1901-6. PMID 6849893 DOI: 10.1021/Bi00277A025 |
0.348 |
|
1983 |
Kallenbach NR, Ma RI, Wand AJ, Veeneman GH, van Boom JH, Seeman NC. Fourth rank immobile nucleic acid junctions. Journal of Biomolecular Structure & Dynamics. 1: 159-68. PMID 6401109 DOI: 10.1080/07391102.1983.10507432 |
0.337 |
|
1983 |
Englander SW, Kallenbach NR. Hydrogen exchange and structural dynamics of proteins and nucleic acids. Quarterly Reviews of Biophysics. 16: 521-655. PMID 6204354 DOI: 10.1017/S0033583500005217 |
0.358 |
|
1983 |
Seeman NC, Kallenbach NR. Design of immobile nucleic acid junctions. Biophysical Journal. 44: 201-9. PMID 6197102 DOI: 10.1016/S0006-3495(83)84292-1 |
0.392 |
|
1983 |
Kallenbach NR, Ma RI, Seeman NC. An immobile nucleic acid junction constructed from oligonucleotides Nature. 305: 829-831. DOI: 10.1038/305829A0 |
0.407 |
|
1981 |
Fritzsche H, Cross TA, Opella SJ, Kallenbach NR. Structure and architecture of the bacterial virus fd. An infrared linear dichroism study. Biophysical Chemistry. 14: 283-91. PMID 7326351 DOI: 10.1016/0301-4622(81)85029-6 |
0.376 |
|
1981 |
DiVerdi JA, Opella SJ, Ma RI, Kallenbach NR, Seeman NC. 31P NMR of DNA in eukaryotic chromosomal complexes. Biochemical and Biophysical Research Communications. 102: 885-90. PMID 7306194 DOI: 10.1016/0006-291X(81)91620-X |
0.354 |
|
1981 |
Young PR, Kallenbach NR. Binding of 9-aminoacridine to deoxydinucleoside phosphates of defined sequence: Preferences and stereochemistry Journal of Molecular Biology. 145: 785-813. PMID 7265221 DOI: 10.1016/0022-2836(81)90315-6 |
0.356 |
|
1981 |
Young PR, Ma RI, Marfey P, Kallenbach NR. Frameshift mutagenesis of 9-aminoacridine derivatives in Salmonella typhimurium Mutation Research/Genetic Toxicology. 90: 1-10. PMID 7029266 DOI: 10.1016/0165-1218(81)90045-8 |
0.321 |
|
1980 |
Englander SW, Calhoun DB, Englander JJ, Kallenbach NR, Liem RK, Malin EL, Mandal C, Rogero JR. Individual breathing reactions measured in hemoglobin by hydrogen exchange methods. Biophysical Journal. 32: 577-89. PMID 7248462 DOI: 10.1016/S0006-3495(80)84991-5 |
0.318 |
|
1980 |
Mandal C, Englander SW, Kallenbach NR. Hydrogen-deuterium exchange analysis of ligand-macromolecule interactions: Ethidium-deoxyribonucleic acid system Biochemistry. 19: 5819-5825. PMID 7193049 DOI: 10.1021/Bi00566A025 |
0.351 |
|
1980 |
Englander SW, Kallenbach NR, Heeger AJ, Krumhansl JA, Litwin S. Nature of the open state in long polynucleotide double helices: Possibility of soliton excitations Proceedings of the National Academy of Sciences of the United States of America. 77: 7222-7226. PMID 6938969 DOI: 10.1073/Pnas.77.12.7222 |
0.368 |
|
1980 |
Young PR, Kallenbach NR. Site exclusion and sequence specificity in binding of 9-aminoacridine to the deoxytetranucleotide dpApGpCpT Proceedings of the National Academy of Sciences of the United States of America. 77: 6453-6457. PMID 6935659 DOI: 10.1073/Pnas.77.11.6453 |
0.34 |
|
1980 |
Mandal C, Englander S, Young P, Kallenbach N. Fluctuational opening-closing reactions in dna and mononucleosome cores of chromatin probed by h-exchange and ligand binding reactions Biophysical Journal. 32: 623-625. DOI: 10.1016/S0006-3495(80)84996-4 |
0.339 |
|
1979 |
Helfgott D, Kallenbach NR. Increased binding of ethidium bromide to polynucleotide duplexes containing mismatched bases Nucleic Acids Research. 7: 1011-1017. PMID 503848 DOI: 10.1093/Nar/7.4.1011 |
0.366 |
|
1979 |
Mandal C, Kallenbach NR, Englander SW. Base-pair opening and closing reactions in the double helix. A stopped-flow hydrogen exchange study in poly(rA) · poly(rU) Journal of Molecular Biology. 135: 391-411. PMID 43902 DOI: 10.1016/0022-2836(79)90443-1 |
0.339 |
|
1978 |
Young PR, Kallenbach NR. Secondary structure in polyuridylic acid. Non-classical hydrogen bonding and the function of the ribose 2′-hydroxyl group Journal of Molecular Biology. 126: 467-479. PMID 745237 DOI: 10.1016/0022-2836(78)90053-0 |
0.353 |
|
1977 |
Kallenbach NR. On the secondary structure in mRNA Biosystems. 9: 201-210. PMID 597592 DOI: 10.1016/0303-2647(77)90004-1 |
0.365 |
|
1976 |
Ramstein J, Leng M, Kallenbach NR. Binding isotherms and the interaction between proflavine and a DNA of high G · C content Biophysical Chemistry. 5: 319-326. PMID 974225 DOI: 10.1016/0301-4622(76)80043-9 |
0.318 |
|
1975 |
Rubin H, Kallenbach NR. Conformational statistics of short RNA chains The Journal of Chemical Physics. 62: 2766-2776. DOI: 10.1063/1.430811 |
0.358 |
|
1973 |
Appleby DW, Kallenbach NR. Theory of oligonucleotide stabilization. I. The effect of single strand stacking Biopolymers. 12: 2093-2120. PMID 4744753 DOI: 10.1002/Bip.1973.360120915 |
0.326 |
|
1973 |
Kallenbach NR, Ma RI, Ofengand J, Siddiqui MAQ. Thermal transitions in E. coli tRNA(fMet) and two of its molecular fragments Biopolymers. 12: 1247-1257. PMID 4581148 DOI: 10.1002/Bip.1973.360120605 |
0.308 |
|
1972 |
Goldstein RN, Stefanovic S, Kallenbach NR. On the conformation of transfer RNA in solution: Dependence of denaturation temperature and structural parameters of mixed and formylmethionyl Escherichia coli transfer RNA on sodium ion concentration Journal of Molecular Biology. 69: 217-236. PMID 4560948 DOI: 10.1016/0022-2836(72)90227-6 |
0.329 |
|
1972 |
Englander JJ, Kallenbach NR, Englander SW. Hydrogen exchange study of some polynucleotides and transfer RNA Journal of Molecular Biology. 63: 153-169. PMID 4552761 DOI: 10.1016/0022-2836(72)90527-X |
0.316 |
|
1968 |
Kallenbach NR. Theory of thermal transitions in low molecular weight RNA chains Journal of Molecular Biology. 37: 445-466. PMID 5719218 DOI: 10.1016/0022-2836(68)90114-9 |
0.311 |
|
1968 |
Kallenbach NR. Replication of DNA in bacteria with heterogeneous generation times Journal of Theoretical Biology. 18: 19-33. PMID 5648880 DOI: 10.1016/0022-5193(68)90168-9 |
0.306 |
|
1966 |
Crothers DM, Kallenbach NR. On the helix-coil transition in heterogeneous polymers The Journal of Chemical Physics. 45: 917-927. DOI: 10.1063/1.1727704 |
0.561 |
|
1965 |
CROTHERS DM, KALLENBACH NR, ZIMM BH. THE MELTING TRANSITION OF LOW-MOLECULAR-WEIGHT DNA: THEORY AND EXPERIMENT. Journal of Molecular Biology. 11: 802-20. PMID 14338789 DOI: 10.1016/S0022-2836(65)80037-7 |
0.662 |
|
1963 |
Kallenbach NR, Crothers DM, Mortimer RG. Interpretation of the kinetics of helix formation Biochemical and Biophysical Research Communications. 11: 213-216. PMID 13961970 DOI: 10.1016/0006-291X(63)90336-X |
0.518 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
1962 |
Zimm BH, Kallenbach NR. Selected Aspects of the Physical Chemistry of Polynucleotides and Nucleic Acids Annual Review of Physical Chemistry. 13: 171-194. DOI: 10.1146/Annurev.Pc.13.100162.001131 |
0.577 |
|
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