| Year |
Citation |
Score |
| 2022 |
Lie TJ, Kuo YP, Leite M, Costa KC, Harwood CS, Leigh JA. A Genetic Study of -Associated Genes in a Hyperthermophilic Methanogen. Microbiology Spectrum. e0209321. PMID 35107346 DOI: 10.1128/spectrum.02093-21 |
0.699 |
|
| 2016 |
Richards MA, Lie TJ, Zhang J, Ragsdale SW, Leigh JA, Price ND. Exploring Hydrogenotrophic Methanogenesis: A Genome Scale Metabolic Reconstruction of Methanococcus maripaludis. Journal of Bacteriology. PMID 27736793 DOI: 10.1128/Jb.00571-16 |
0.471 |
|
| 2014 |
Lohner ST, Deutzmann JS, Logan BE, Leigh J, Spormann AM. Hydrogenase-independent uptake and metabolism of electrons by the archaeon Methanococcus maripaludis. The Isme Journal. 8: 1673-81. PMID 24844759 DOI: 10.1038/Ismej.2014.82 |
0.463 |
|
| 2014 |
Costa KC, Leigh JA. Metabolic versatility in methanogens. Current Opinion in Biotechnology. 29: 70-5. PMID 24662145 DOI: 10.1016/J.Copbio.2014.02.012 |
0.705 |
|
| 2013 |
Ho Yoon S, Turkarslan S, Reiss DJ, Pan M, Burn JA, Costa KC, Lie TJ, Slagel J, Moritz RL, Hackett M, Leigh JA, Baliga NS. A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen Genome Research. 23: 1839-1851. PMID 24089473 DOI: 10.1101/Gr.153916.112 |
0.717 |
|
| 2013 |
Costa KC, Lie TJ, Xia Q, Leigh JA. VhuD facilitates electron flow from H2 or formate to heterodisulfide reductase in Methanococcus maripaludis. Journal of Bacteriology. 195: 5160-5. PMID 24039260 DOI: 10.1128/Jb.00895-13 |
0.714 |
|
| 2013 |
Lie TJ, Costa KC, Pak D, Sakesan V, Leigh JA. Phenotypic evidence that the function of the [Fe]-hydrogenase Hmd in Methanococcus maripaludis requires seven hcg (hmd co-occurring genes) but not hmdII. Fems Microbiology Letters. 343: 156-60. PMID 23551135 DOI: 10.1111/1574-6968.12141 |
0.707 |
|
| 2013 |
Costa KC, Lie TJ, Jacobs MA, Leigh JA. H2-independent growth of the hydrogenotrophic methanogen Methanococcus maripaludis Mbio. 4. PMID 23443005 DOI: 10.1128/Mbio.00062-13 |
0.731 |
|
| 2013 |
Costa KC, Yoon SH, Pan M, Burn JA, Baliga NS, Leigh JA. Effects of H2 and formate on growth yield and regulation of methanogenesis in Methanococcus maripaludis. Journal of Bacteriology. 195: 1456-62. PMID 23335420 DOI: 10.1128/Jb.02141-12 |
0.732 |
|
| 2012 |
Lie TJ, Costa KC, Lupa B, Korpole S, Whitman WB, Leigh JA. Essential anaplerotic role for the energy-converting hydrogenase Eha in hydrogenotrophic methanogenesis. Proceedings of the National Academy of Sciences of the United States of America. 109: 15473-8. PMID 22872868 DOI: 10.1073/Pnas.1208779109 |
0.734 |
|
| 2012 |
Walker CB, Redding-Johanson AM, Baidoo EE, Rajeev L, He Z, Hendrickson EL, Joachimiak MP, Stolyar S, Arkin AP, Leigh JA, Zhou J, Keasling JD, Mukhopadhyay A, Stahl DA. Functional responses of methanogenic archaea to syntrophic growth. The Isme Journal. 6: 2045-55. PMID 22739494 DOI: 10.1038/Ismej.2012.60 |
0.438 |
|
| 2011 |
Yoon SH, Reiss DJ, Bare JC, Tenenbaum D, Pan M, Slagel J, Moritz RL, Lim S, Hackett M, Menon AL, Adams MW, Barnebey A, Yannone SM, Leigh JA, Baliga NS. Parallel evolution of transcriptome architecture during genome reorganization. Genome Research. 21: 1892-904. PMID 21750103 DOI: 10.1101/Gr.122218.111 |
0.365 |
|
| 2011 |
Leigh JA. Growth of methanogens under defined hydrogen conditions Methods in Enzymology. 494: 111-118. PMID 21402212 DOI: 10.1016/B978-0-12-385112-3.00006-8 |
0.329 |
|
| 2011 |
Sarmiento F, Leigh JA, Whitman WB. Genetic systems for hydrogenotrophic methanogens. Methods in Enzymology. 494: 43-73. PMID 21402209 DOI: 10.1016/B978-0-12-385112-3.00003-2 |
0.551 |
|
| 2010 |
Wisedchaisri G, Dranow DM, Lie TJ, Bonanno JB, Patskovsky Y, Ozyurt SA, Sauder JM, Almo SC, Wasserman SR, Burley SK, Leigh JA, Gonen T. Structural underpinnings of nitrogen regulation by the prototypical nitrogen-responsive transcriptional factor NrpR. Structure (London, England : 1993). 18: 1512-21. PMID 21070950 DOI: 10.1016/J.Str.2010.08.014 |
0.325 |
|
| 2010 |
Costa KC, Wong PM, Wang T, Lie TJ, Dodsworth JA, Swanson I, Burn JA, Hackett M, Leigh JA. Protein complexing in a methanogen suggests electron bifurcation and electron delivery from formate to heterodisulfide reductase. Proceedings of the National Academy of Sciences of the United States of America. 107: 11050-5. PMID 20534465 DOI: 10.1073/Pnas.1003653107 |
0.719 |
|
| 2009 |
Goldman AD, Leigh JA, Samudrala R. Comprehensive computational analysis of Hmd enzymes and paralogs in methanogenic Archaea Bmc Evolutionary Biology. 9. PMID 19671178 DOI: 10.1186/1471-2148-9-199 |
0.367 |
|
| 2009 |
Xia Q, Wang T, Hendrickson EL, Lie TJ, Hackett M, Leigh JA. Quantitative proteomics of nutrient limitation in the hydrogenotrophic methanogen Methanococcus maripaludis Bmc Microbiology. 9. PMID 19627604 DOI: 10.1186/1471-2180-9-149 |
0.379 |
|
| 2008 |
Lupa B, Hendrickson EL, Leigh JA, Whitman WB. Formate-dependent H2 production by the mesophilic methanogen Methanococcus maripaludis. Applied and Environmental Microbiology. 74: 6584-90. PMID 18791018 DOI: 10.1128/Aem.01455-08 |
0.567 |
|
| 2008 |
Hendrickson EL, Leigh JA. Roles of coenzyme F420-reducing hydrogenases and hydrogen- and F420-dependent methylenetetrahydromethanopterin dehydrogenases in reduction of F420 and production of hydrogen during methanogenesis. Journal of Bacteriology. 190: 4818-21. PMID 18487331 DOI: 10.1128/Jb.00255-08 |
0.37 |
|
| 2008 |
Hendrickson EL, Liu Y, Rosas-Sandoval G, Porat I, Söll D, Whitman WB, Leigh JA. Global responses of Methanococcus maripaludis to specific nutrient limitations and growth rate. Journal of Bacteriology. 190: 2198-205. PMID 18203827 DOI: 10.1128/Jb.01805-07 |
0.54 |
|
| 2007 |
Lie TJ, Leigh JA. Genetic screen for regulatory mutations in Methanococcus maripaludis and its use in identification of induction-deficient mutants of the euryarchaeal repressor NrpR. Applied and Environmental Microbiology. 73: 6595-600. PMID 17720835 DOI: 10.1128/Aem.01324-07 |
0.342 |
|
| 2007 |
Xia Q, Hendrickson EL, Wang T, Lamont RJ, Leigh JA, Hackett M. Protein abundance ratios for global studies of prokaryotes Proteomics. 7: 2904-2919. PMID 17639608 DOI: 10.1002/Pmic.200700267 |
0.301 |
|
| 2007 |
Hendrickson EL, Haydock AK, Moore BC, Whitman WB, Leigh JA. Functionally distinct genes regulated by hydrogen limitation and growth rate in methanogenic Archaea. Proceedings of the National Academy of Sciences of the United States of America. 104: 8930-4. PMID 17502615 DOI: 10.1073/Pnas.0701157104 |
0.585 |
|
| 2007 |
Stolyar S, Van Dien S, Hillesland KL, Pinel N, Lie TJ, Leigh JA, Stahl DA. Metabolic modeling of a mutualistic microbial community. Molecular Systems Biology. 3: 92. PMID 17353934 DOI: 10.1038/Msb4100131 |
0.362 |
|
| 2007 |
Cangelosi GA, Martinetti G, Leigh JA, Lee CC, Thienes C, Nester EW. Role of Agrobacterium tumefaciens ChvA Protein in Export of β-1,2-Glucan Journal of Bacteriology. 189: 6742-6742. DOI: 10.1128/Jb.01103-07 |
0.31 |
|
| 2006 |
Hendrickson EL, Xia Q, Wang T, Leigh JA, Hackett M. Comparison of spectral counting and metabolic stable isotope labeling for use with quantitative microbial proteomics. The Analyst. 131: 1335-41. PMID 17124542 DOI: 10.1039/B610957H |
0.32 |
|
| 2006 |
Dodsworth JA, Leigh JA. Regulation of nitrogenase by 2-oxoglutarate-reversible, direct binding of a PII-like nitrogen sensor protein to dinitrogenase. Proceedings of the National Academy of Sciences of the United States of America. 103: 9779-84. PMID 16777963 DOI: 10.1073/Pnas.0602278103 |
0.314 |
|
| 2006 |
Xia Q, Hendrickson EL, Zhang Y, Wang T, Taub F, Moore BC, Porat I, Whitman WB, Hackett M, Leigh JA. Quantitative proteomics of the archaeon Methanococcus maripaludis validated by microarray analysis and real time PCR. Molecular & Cellular Proteomics : McP. 5: 868-81. PMID 16489187 DOI: 10.1074/Mcp.M500369-Mcp200 |
0.523 |
|
| 2006 |
Porat I, Kim W, Hendrickson EL, Xia Q, Zhang Y, Wang T, Taub F, Moore BC, Anderson IJ, Hackett M, Leigh JA, Whitman WB. Disruption of the operon encoding Ehb hydrogenase limits anabolic CO2 assimilation in the archaeon Methanococcus maripaludis. Journal of Bacteriology. 188: 1373-80. PMID 16452419 DOI: 10.1128/Jb.188.4.1373-1380.2006 |
0.577 |
|
| 2005 |
Moore BC, Leigh JA. Markerless mutagenesis in Methanococcus maripaludis demonstrates roles for alanine dehydrogenase, alanine racemase, and alanine permease. Journal of Bacteriology. 187: 972-9. PMID 15659675 DOI: 10.1128/Jb.187.3.972-979.2005 |
0.363 |
|
| 2005 |
Lie TJ, Wood GE, Leigh JA. Regulation of nif expression in Methanococcus maripaludis: roles of the euryarchaeal repressor NrpR, 2-oxoglutarate, and two operators. The Journal of Biological Chemistry. 280: 5236-41. PMID 15590692 DOI: 10.1074/Jbc.M411778200 |
0.303 |
|
| 2004 |
Hendrickson EL, Kaul R, Zhou Y, Bovee D, Chapman P, Chung J, Conway de Macario E, Dodsworth JA, Gillett W, Graham DE, Hackett M, Haydock AK, Kang A, Land ML, Levy R, ... ... Leigh JA, et al. Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis. Journal of Bacteriology. 186: 6956-69. PMID 15466049 DOI: 10.1128/Jb.186.20.6956-6969.2004 |
0.564 |
|
| 2004 |
Haydock AK, Porat I, Whitman WB, Leigh JA. Continuous culture of Methanococcus maripaludis under defined nutrient conditions. Fems Microbiology Letters. 238: 85-91. PMID 15336407 DOI: 10.1016/J.Femsle.2004.07.021 |
0.572 |
|
| 2004 |
Haydock AK, Porat I, Whitman WB, Leigh JA. Continuous culture ofMethanococcus maripaludisunder defined nutrient conditions Fems Microbiology Letters. 238: 85-91. DOI: 10.1111/J.1574-6968.2004.Tb09741.X |
0.565 |
|
| 2003 |
Wood GE, Haydock AK, Leigh JA. Function and regulation of the formate dehydrogenase genes of the methanogenic archaeon Methanococcus maripaludis. Journal of Bacteriology. 185: 2548-54. PMID 12670979 DOI: 10.1128/Jb.185.8.2548-2554.2003 |
0.406 |
|
| 2003 |
Lie TJ, Leigh JA. A novel repressor of nif and glnA expression in the methanogenic archaeon Methanococcus maripaludis. Molecular Microbiology. 47: 235-46. PMID 12492867 DOI: 10.1046/J.1365-2958.2003.03293.X |
0.341 |
|
| 2002 |
Lie TJ, Leigh JA. Regulatory response of Methanococcus maripaludis to alanine, an intermediate nitrogen source. Journal of Bacteriology. 184: 5301-6. PMID 12218015 DOI: 10.1128/Jb.184.19.5301-5306.2002 |
0.341 |
|
| 2002 |
Galagan JE, Nusbaum C, Roy A, Endrizzi MG, Macdonald P, FitzHugh W, Calvo S, Engels R, Smirnov S, Atnoor D, Brown A, Allen N, Naylor J, Stange-Thomann N, DeArellano K, ... ... Leigh JA, et al. The genome of M. acetivorans reveals extensive metabolic and physiological diversity. Genome Research. 12: 532-42. PMID 11932238 DOI: 10.1101/Gr.223902 |
0.606 |
|
| 2001 |
Kessler PS, Daniel C, Leigh JA. Ammonia switch-off of nitrogen fixation in the methanogenic archaeon Methanococcus maripaludis: mechanistic features and requirement for the novel GlnB homologues, NifI(1) and NifI(2). Journal of Bacteriology. 183: 882-9. PMID 11208785 DOI: 10.1128/Jb.183.3.882-889.2001 |
0.331 |
|
| 1999 |
Cohen-Kupiec R, Kupiec M, Sandbeck K, Leigh JA. Functional conservation between the argininosuccinate lyase of the archaeon Methanococcus maripaludis and the corresponding bacterial and eukaryal genes. Fems Microbiology Letters. 173: 231-8. PMID 10220900 DOI: 10.1111/J.1574-6968.1999.Tb13507.X |
0.364 |
|
| 1999 |
Cohen-Kupiec R, Marx CJ, Leigh JA. Function and regulation of glnA in the methanogenic archaeon Methanococcus maripaludis. Journal of Bacteriology. 181: 256-61. PMID 9864338 DOI: 10.1128/Jb.181.1.256-261.1999 |
0.382 |
|
| 1998 |
Kessler PS, Blank C, Leigh JA. The nif gene operon of the methanogenic archaeon Methanococcus maripaludis. Journal of Bacteriology. 180: 1504-11. PMID 9515920 DOI: 10.1128/Jb.180.6.1504-1511.1998 |
0.341 |
|
| 1997 |
Cohen-Kupiec R, Blank C, Leigh JA. Transcriptional regulation in Archaea: in vivo demonstration of a repressor binding site in a methanogen. Proceedings of the National Academy of Sciences of the United States of America. 94: 1316-20. PMID 9037050 DOI: 10.1073/Pnas.94.4.1316 |
0.306 |
|
| 1997 |
Kessler PS, McLarnan J, Leigh JA. Nitrogenase phylogeny and the molybdenum dependence of nitrogen fixation in Methanococcus maripaludis. Journal of Bacteriology. 179: 541-3. PMID 8990309 DOI: 10.1128/Jb.179.2.541-543.1997 |
0.318 |
|
| 1995 |
Blank CE, Kessler PS, Leigh JA. Genetics in methanogens: transposon insertion mutagenesis of a Methanococcus maripaludis nifH gene. Journal of Bacteriology. 177: 5773-7. PMID 7592322 DOI: 10.1128/Jb.177.20.5773-5777.1995 |
0.325 |
|
| 1994 |
Jelesko JG, Leigh JA. Genetic characterization of a Rhizobium meliloti lactose utilization locus. Molecular Microbiology. 11: 165-73. PMID 8145640 DOI: 10.1111/J.1365-2958.1994.Tb00298.X |
0.378 |
|
| 1992 |
Leigh JA, Coplin DL. Exopolysaccharides in plant-bacterial interactions Annual Review of Microbiology. 46: 307-346. PMID 1444258 DOI: 10.1146/Annurev.Mi.46.100192.001515 |
0.312 |
|
| 1991 |
Zhan HJ, Lee CC, Leigh JA. Induction of the second exopolysaccharide (EPSb) in Rhizobium meliloti SU47 by low phosphate concentrations. Journal of Bacteriology. 173: 7391-4. PMID 1938929 DOI: 10.1128/Jb.173.22.7391-7394.1991 |
0.351 |
|
| 1990 |
Zhan HJ, Gray JX, Levery SB, Rolfe BG, Leigh JA. Functional and evolutionary relatedness of genes for exopolysaccharide synthesis in Rhizobium meliloti and Rhizobium sp. strain NGR234. Journal of Bacteriology. 172: 5245-53. PMID 2203745 DOI: 10.1128/Jb.172.9.5245-5253.1990 |
0.313 |
|
| 1990 |
Zhan H, Leigh JA. Two genes that regulate exopolysaccharide production in Rhizobium meliloti Journal of Bacteriology. 172: 5254-5259. PMID 2118508 DOI: 10.1128/Jb.172.9.5254-5259.1990 |
0.387 |
|
| 1989 |
Cangelosi GA, Martinetti G, Leigh JA, Lee CC, Theines C, Nester EW. Role for [corrected] Agrobacterium tumefaciens ChvA protein in export of beta-1,2-glucan Journal of Bacteriology. 171: 1609-1615. PMID 2921245 DOI: 10.1128/Jb.171.3.1609-1615.1989 |
0.302 |
|
| 1987 |
Cangelosi GA, Hung L, Puvanesarajah V, Stacey G, Ozga DA, Leigh JA, Nester EW. Common loci for Agrobacterium tumefaciens and Rhizobium meliloti exopolysaccharide synthesis and their roles in plant interactions Journal of Bacteriology. 169: 2086-2091. PMID 3571162 DOI: 10.1128/Jb.169.5.2086-2091.1987 |
0.308 |
|
| 1987 |
Leigh JA, Reed JW, Hanks JF, Hirsch AM, Walker GC. Rhizobium meliloti mutants that fail to succinylate their calcofluor-binding exopolysaccharide are defective in nodule invasion. Cell. 51: 579-87. PMID 2824062 DOI: 10.1016/0092-8674(87)90127-9 |
0.316 |
|
| 1985 |
Leigh JA, Rinehart KL, Wolfe RS. Methanofuran (carbon dioxide reduction factor), a formyl carrier in methane production from carbon dioxide in Methanobacterium. Biochemistry. 24: 995-9. PMID 3922409 DOI: 10.1021/Bi00325A028 |
0.541 |
|
| 1985 |
Leigh JA, Signer ER, Walker GC. Exopolysaccharide-deficient mutants of Rhizobium meliloti that form ineffective nodules. Proceedings of the National Academy of Sciences of the United States of America. 82: 6231-5. PMID 3862129 DOI: 10.1073/Pnas.82.18.6231 |
0.327 |
|
| 1984 |
Escalante-Semerena JC, Leigh JA, Rinehart KL, Wolfe RS. Formaldehyde activation factor, tetrahydromethanopterin, a coenzyme of methanogenesis. Proceedings of the National Academy of Sciences of the United States of America. 81: 1976-80. PMID 16593444 DOI: 10.1073/Pnas.81.7.1976 |
0.645 |
|
| 1984 |
LEIGH JA, RINEHART KLJ, WOLFE RS. ChemInform Abstract: STRUCTURE OF METHANOFURAN, THE CARBON DIOXIDE REDUCTION FACTOR OF METHANOBACTERIUM THERMOAUTOTROPHICUM Chemischer Informationsdienst. 15. DOI: 10.1002/chin.198439065 |
0.472 |
|
| 1984 |
Leigh JA, Rinehart KL, Wolfe RS. Structure of methanofuran, the carbon dioxide reduction factor of Methanobacterium thermoautotrophicum Journal of the American Chemical Society. 106: 3636-3640. DOI: 10.1002/Chin.198439065 |
0.52 |
|
| 1983 |
LEIGH JA, WOLFE RS. Acetogenium kivui gen. nov., sp. nov., a Thermophilic Acetogenic Bacterium International Journal of Systematic Bacteriology. 33: 886-886. DOI: 10.1099/00207713-33-4-886 |
0.454 |
|
| 1983 |
Jones WJ, Leigh JA, Mayer F, Woese CR, Wolfe RS. Methanococcus jannaschii sp. nov., an extremely thermophilic methanogen from a submarine hydrothermal vent Archives of Microbiology. 136: 254-261. DOI: 10.1007/BF00425213 |
0.457 |
|
| 1981 |
Leigh JA, Mayer F, Wolfe RS. Acetogenium kivui, a new thermophilic hydrogen-oxidizing acetogenic bacterium Archives of Microbiology. 129: 275-280. DOI: 10.1007/BF00414697 |
0.466 |
|
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