| Year |
Citation |
Score |
| 2020 |
Garcia LE, Edera AA, Palmer JD, Sato H, Sanchez-Puerta MV. Horizontal gene transfers dominate the functional mitochondrial gene space of a holoparasitic plant. The New Phytologist. PMID 32929737 DOI: 10.1111/Nph.16926 |
0.566 |
|
| 2019 |
Bell D, Lin Q, Gerelle WK, Joya S, Chang Y, Taylor ZN, Rothfels CJ, Larsson A, Villarreal JC, Li FW, Pokorny L, Szövényi P, Crandall-Stotler B, DeGironimo L, Floyd SK, ... ... Palmer JD, et al. Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution. American Journal of Botany. PMID 31814117 DOI: 10.1002/Ajb2.1397 |
0.511 |
|
| 2018 |
Su HJ, Barkman TJ, Hao W, Jones SS, Naumann J, Skippington E, Wafula EK, Hu JM, Palmer JD, dePamphilis CW. Novel genetic code and record-setting AT-richness in the highly reduced plastid genome of the holoparasitic plant . Proceedings of the National Academy of Sciences of the United States of America. PMID 30598433 DOI: 10.1073/Pnas.1816822116 |
0.856 |
|
| 2018 |
Cole LW, Guo W, Mower JP, Palmer JD. High and variable rates of repeat-mediated mitochondrial genome rearrangement in a genus of plants. Molecular Biology and Evolution. PMID 30202905 DOI: 10.1093/Molbev/Msy176 |
0.841 |
|
| 2017 |
Wu Z, Sloan DB, Brown CW, Rosenblueth M, Palmer JD, Ong HC. Mitochondrial retroprocessing promoted functional transfers of rpl5 to the nucleus in grasses. Molecular Biology and Evolution. PMID 28541477 DOI: 10.1093/Molbev/Msx170 |
0.727 |
|
| 2017 |
Skippington E, Barkman TJ, Rice DW, Palmer JD. Comparative mitogenomics indicates respiratory competence in parasitic Viscum despite loss of complex I and extreme sequence divergence, and reveals horizontal gene transfer and remarkable variation in genome size. Bmc Plant Biology. 17: 49. PMID 28222679 DOI: 10.1186/S12870-017-0992-8 |
0.8 |
|
| 2016 |
Guo W, Grewe F, Fan W, Young GJ, Knoop V, Palmer JD, Mower JP. Ginkgo and Welwitschia mitogenomes reveal extreme contrasts in gymnosperm mitochondrial evolution. Molecular Biology and Evolution. PMID 26831941 DOI: 10.1093/Molbev/Msw024 |
0.79 |
|
| 2015 |
Taylor ZN, Rice DW, Palmer JD. The Complete Moss Mitochondrial Genome in the Angiosperm Amborella Is a Chimera Derived from Two Moss Whole-Genome Transfers. Plos One. 10: e0137532. PMID 26618775 DOI: 10.1371/Journal.Pone.0137532 |
0.557 |
|
| 2015 |
Skippington E, Barkman TJ, Rice DW, Palmer JD. Miniaturized mitogenome of the parasitic plant Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes. Proceedings of the National Academy of Sciences of the United States of America. PMID 26100885 DOI: 10.1073/Pnas.1504491112 |
0.841 |
|
| 2015 |
Sanchez-Puerta MV, Zubko MK, Palmer JD. Homologous recombination and retention of a single form of most genes shape the highly chimeric mitochondrial genome of a cybrid plant. The New Phytologist. 206: 381-96. PMID 25441621 DOI: 10.1111/Nph.13188 |
0.822 |
|
| 2014 |
Magee AM, Aspinall S, Rice DW, Cusack BP, Sémon M, Perry AS, Stefanović S, Milbourne D, Barth S, Palmer JD, Gray JC, Kavanagh TA, Wolfe KH. Localized hypermutation and associated gene losses in legume chloroplast genomes (Genome Research (2010) 20, (1700-1710)) Genome Research. 24: 1052. |
0.352 |
|
| 2013 |
Rice DW, Alverson AJ, Richardson AO, Young GJ, Sanchez-Puerta MV, Munzinger J, Barry K, Boore JL, Zhang Y, dePamphilis CW, Knox EB, Palmer JD. Horizontal transfer of entire genomes via mitochondrial fusion in the angiosperm Amborella. Science (New York, N.Y.). 342: 1468-73. PMID 24357311 DOI: 10.1126/Science.1246275 |
0.836 |
|
| 2013 |
Gutu A, Nesbit AD, Alverson AJ, Palmer JD, Kehoe DM. Unique role for translation initiation factor 3 in the light color regulation of photosynthetic gene expression. Proceedings of the National Academy of Sciences of the United States of America. 110: 16253-8. PMID 24048028 DOI: 10.1073/Pnas.1306332110 |
0.423 |
|
| 2013 |
Richardson AO, Rice DW, Young GJ, Alverson AJ, Palmer JD. The "fossilized" mitochondrial genome of Liriodendron tulipifera: ancestral gene content and order, ancestral editing sites, and extraordinarily low mutation rate. Bmc Biology. 11: 29. PMID 23587068 DOI: 10.1186/1741-7007-11-29 |
0.828 |
|
| 2013 |
DePamphilis CW, Palmer JD, Rounsley S, Sankoff D, Schuster SC, Ammiraju JSS, Barbazuk WB, Chamala S, Chanderbali AS, Determann R, Hong M, Ralph P, Talag J, Tomsho L, Walts B, et al. The Amborella genome and the evolution of flowering plants Science. 342. DOI: 10.1126/science.1241089 |
0.727 |
|
| 2013 |
Zheng YH, Alverson AJ, Wang QF, Palmer JD. Chloroplast phylogeny of Cucurbita: Evolution of the domesticated and wild species Journal of Systematics and Evolution. 51: 326-334. DOI: 10.1111/Jse.12006 |
0.402 |
|
| 2012 |
Sloan DB, Alverson AJ, Chuckalovcak JP, Wu M, McCauley DE, Palmer JD, Taylor DR. Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates. Plos Biology. 10: e1001241. PMID 22272183 DOI: 10.1371/Journal.Pbio.1001241 |
0.521 |
|
| 2012 |
Sloan DB, Alverson AJ, Wu M, Palmer JD, Taylor DR. Recent acceleration of plastid sequence and structural evolution coincides with extreme mitochondrial divergence in the angiosperm genus Silene. Genome Biology and Evolution. 4: 294-306. PMID 22247429 DOI: 10.1093/Gbe/Evs006 |
0.578 |
|
| 2011 |
Hao W, Palmer JD. HGT turbulence: Confounding phylogenetic influence of duplicative horizontal transfer and differential gene conversion. Mobile Genetic Elements. 1: 256-261. PMID 22545235 DOI: 10.4161/Mge.19030 |
0.692 |
|
| 2011 |
Sanchez-Puerta MV, Abbona CC, Zhuo S, Tepe EJ, Bohs L, Olmstead RG, Palmer JD. Multiple recent horizontal transfers of the cox1 intron in Solanaceae and extended co-conversion of flanking exons. Bmc Evolutionary Biology. 11: 277. PMID 21943226 DOI: 10.1186/1471-2148-11-277 |
0.842 |
|
| 2011 |
Alverson AJ, Rice DW, Dickinson S, Barry K, Palmer JD. Origins and recombination of the bacterial-sized multichromosomal mitochondrial genome of cucumber. The Plant Cell. 23: 2499-513. PMID 21742987 DOI: 10.1105/Tpc.111.087189 |
0.551 |
|
| 2011 |
Alverson AJ, Zhuo S, Rice DW, Sloan DB, Palmer JD. The mitochondrial genome of the legume Vigna radiata and the analysis of recombination across short mitochondrial repeats. Plos One. 6: e16404. PMID 21283772 DOI: 10.1371/Journal.Pone.0016404 |
0.556 |
|
| 2010 |
Mower JP, Stefanović S, Hao W, Gummow JS, Jain K, Ahmed D, Palmer JD. Horizontal acquisition of multiple mitochondrial genes from a parasitic plant followed by gene conversion with host mitochondrial genes. Bmc Biology. 8: 150. PMID 21176201 DOI: 10.1186/1741-7007-8-150 |
0.861 |
|
| 2010 |
Hao W, Richardson AO, Zheng Y, Palmer JD. Gorgeous mosaic of mitochondrial genes created by horizontal transfer and gene conversion. Proceedings of the National Academy of Sciences of the United States of America. 107: 21576-81. PMID 21115831 DOI: 10.1073/Pnas.1016295107 |
0.829 |
|
| 2010 |
Magee AM, Aspinall S, Rice DW, Cusack BP, Sémon M, Perry AS, Stefanović S, Milbourne D, Barth S, Palmer JD, Gray JC, Kavanagh TA, Wolfe KH. Localized hypermutation and associated gene losses in legume chloroplast genomes. Genome Research. 20: 1700-10. PMID 20978141 DOI: 10.1101/Gr.111955.110 |
0.552 |
|
| 2010 |
Sloan DB, Alverson AJ, Storchová H, Palmer JD, Taylor DR. Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia. Bmc Evolutionary Biology. 10: 274. PMID 20831793 DOI: 10.1186/1471-2148-10-274 |
0.637 |
|
| 2010 |
Sloan DB, MacQueen AH, Alverson AJ, Palmer JD, Taylor DR. Extensive loss of RNA editing sites in rapidly evolving Silene mitochondrial genomes: selection vs. retroprocessing as the driving force. Genetics. 185: 1369-80. PMID 20479143 DOI: 10.1534/Genetics.110.118000 |
0.413 |
|
| 2010 |
Alverson AJ, Wei X, Rice DW, Stern DB, Barry K, Palmer JD. Insights into the evolution of mitochondrial genome size from complete sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae). Molecular Biology and Evolution. 27: 1436-48. PMID 20118192 DOI: 10.1093/Molbev/Msq029 |
0.535 |
|
| 2010 |
Jansen RK, Palmer JD. A chloroplast DNA inversion marks an ancient evolutionary split in the sunflower family (Asteraceae). Proceedings of the National Academy of Sciences of the United States of America. 84: 5818-22. PMID 16593871 DOI: 10.1073/Pnas.84.16.5818 |
0.546 |
|
| 2010 |
Stern DB, Palmer JD. Extensive and widespread homologies between mitochondrial DNA and chloroplast DNA in plants. Proceedings of the National Academy of Sciences of the United States of America. 81: 1946-50. PMID 16593442 DOI: 10.1073/Pnas.81.7.1946 |
0.528 |
|
| 2009 |
Hao W, Palmer JD. Fine-scale mergers of chloroplast and mitochondrial genes create functional, transcompartmentally chimeric mitochondrial genes. Proceedings of the National Academy of Sciences of the United States of America. 106: 16728-33. PMID 19805364 DOI: 10.1073/Pnas.0908766106 |
0.723 |
|
| 2009 |
Stefanović S, Pfeil BE, Palmer JD, Doyle JJ. Relationships among phaseoloid legumes based on sequences from eight chloroplast regions Systematic Botany. 34: 115-128. DOI: 10.1600/036364409787602221 |
0.635 |
|
| 2009 |
Stefanović S, Pfeil BE, Palmer JD, Doyle JJ. Relationships Among Phaseoloid Legumes Based on Sequences from Eight Chloroplast Regions Systematic Botany. 34: 115-128. DOI: 10.1600/036364409787602221 |
0.6 |
|
| 2008 |
Keeling PJ, Palmer JD. Horizontal gene transfer in eukaryotic evolution. Nature Reviews. Genetics. 9: 605-18. PMID 18591983 DOI: 10.1038/Nrg2386 |
0.646 |
|
| 2008 |
Sanchez-Puerta MV, Cho Y, Mower JP, Alverson AJ, Palmer JD. Frequent, phylogenetically local horizontal transfer of the cox1 group I Intron in flowering plant mitochondria. Molecular Biology and Evolution. 25: 1762-77. PMID 18524785 DOI: 10.1093/Molbev/Msn129 |
0.842 |
|
| 2008 |
Ming R, Hou S, Feng Y, Yu Q, Dionne-Laporte A, Saw JH, Senin P, Wang W, Ly BV, Lewis KL, Salzberg SL, Feng L, Jones MR, Skelton RL, Murray JE, ... ... Palmer JD, et al. The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus). Nature. 452: 991-6. PMID 18432245 DOI: 10.1038/Nature06856 |
0.68 |
|
| 2008 |
Soltis DE, Albert VA, Leebens-Mack J, Palmer JD, Wing RA, dePamphilis CW, Ma H, Carlson JE, Altman N, Kim S, Wall PK, Zuccolo A, Soltis PS. The Amborella genome: an evolutionary reference for plant biology. Genome Biology. 9: 402. PMID 18341710 DOI: 10.1186/Gb-2008-9-3-402 |
0.685 |
|
| 2007 |
Haugen P, Bhattacharya D, Palmer JD, Turner S, Lewis LA, Pryer KM. Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns. Bmc Evolutionary Biology. 7: 159. PMID 17825109 DOI: 10.1186/1471-2148-7-159 |
0.442 |
|
| 2007 |
Mower JP, Touzet P, Gummow JS, Delph LF, Palmer JD. Extensive variation in synonymous substitution rates in mitochondrial genes of seed plants. Bmc Evolutionary Biology. 7: 135. PMID 17688696 DOI: 10.1186/1471-2148-7-135 |
0.77 |
|
| 2007 |
Richardson AO, Palmer JD. Horizontal gene transfer in plants. Journal of Experimental Botany. 58: 1-9. PMID 17030541 DOI: 10.1093/Jxb/Erl148 |
0.819 |
|
| 2006 |
Rice DW, Palmer JD. An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters. Bmc Biology. 4: 31. PMID 16956407 DOI: 10.1186/1741-7007-4-31 |
0.626 |
|
| 2006 |
Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, Boore JL, Jansen RK. The complete chloroplast genome sequence of Pelargonium x hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Molecular Biology and Evolution. 23: 2175-90. PMID 16916942 DOI: 10.1093/Molbev/Msl089 |
0.8 |
|
| 2006 |
Mower JP, Palmer JD. Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris. Molecular Genetics and Genomics : Mgg. 276: 285-93. PMID 16862402 DOI: 10.1007/S00438-006-0139-3 |
0.774 |
|
| 2006 |
Ong HC, Palmer JD. Pervasive survival of expressed mitochondrial rps14 pseudogenes in grasses and their relatives for 80 million years following three functional transfers to the nucleus. Bmc Evolutionary Biology. 6: 55. PMID 16842621 DOI: 10.1186/1471-2148-6-55 |
0.754 |
|
| 2005 |
Parkinson CL, Mower JP, Qiu YL, Shirk AJ, Song K, Young ND, DePamphilis CW, Palmer JD. Multiple major increases and decreases in mitochondrial substitution rates in the plant family Geraniaceae. Bmc Evolutionary Biology. 5: 73. PMID 16368004 DOI: 10.1186/1471-2148-5-73 |
0.751 |
|
| 2005 |
Fischer WM, Palmer JD. Evidence from small-subunit ribosomal RNA sequences for a fungal origin of Microsporidia. Molecular Phylogenetics and Evolution. 36: 606-22. PMID 15923129 DOI: 10.1016/J.Ympev.2005.03.031 |
0.656 |
|
| 2004 |
Palmer JD, Soltis DE, Chase MW. The plant tree of life: an overview and some points of view. American Journal of Botany. 91: 1437-45. PMID 21652302 DOI: 10.3732/Ajb.91.10.1437 |
0.53 |
|
| 2004 |
Keeling PJ, Archibald JM, Fast NM, Palmer JD. Comment on "The evolution of modern eukaryotic phytoplankton". Science (New York, N.Y.). 306: 2191; author reply 2. PMID 15618503 DOI: 10.1126/Science.1103879 |
0.628 |
|
| 2004 |
Cho Y, Mower JP, Qiu YL, Palmer JD. Mitochondrial substitution rates are extraordinarily elevated and variable in a genus of flowering plants. Proceedings of the National Academy of Sciences of the United States of America. 101: 17741-6. PMID 15598738 DOI: 10.1073/Pnas.0408302101 |
0.759 |
|
| 2004 |
Bergthorsson U, Richardson AO, Young GJ, Goertzen LR, Palmer JD. Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella. Proceedings of the National Academy of Sciences of the United States of America. 101: 17747-52. PMID 15598737 DOI: 10.1073/Pnas.0408336102 |
0.871 |
|
| 2004 |
Mower JP, Stefanović S, Young GJ, Palmer JD. Plant genetics: gene transfer from parasitic to host plants. Nature. 432: 165-6. PMID 15538356 DOI: 10.1038/432165B |
0.79 |
|
| 2004 |
Soltis DE, Albert VA, Savolainen V, Hilu K, Qiu YL, Chase MW, Farris JS, Stefanović S, Rice DW, Palmer JD, Soltis PS. Genome-scale data, angiosperm relationships, and "ending incongruence": a cautionary tale in phylogenetics. Trends in Plant Science. 9: 477-83. PMID 15465682 DOI: 10.1016/J.Tplants.2004.08.008 |
0.751 |
|
| 2004 |
Stefanović S, Rice DW, Palmer JD. Long branch attraction, taxon sampling, and the earliest angiosperms: Amborella or monocots? Bmc Evolutionary Biology. 4: 35. PMID 15453916 DOI: 10.1186/1471-2148-4-35 |
0.705 |
|
| 2004 |
Qiu YL, Palmer JD. Many independent origins of trans splicing of a plant mitochondrial group II intron. Journal of Molecular Evolution. 59: 80-9. PMID 15383910 DOI: 10.1007/S00239-004-2606-Y |
0.476 |
|
| 2004 |
Gerbod D, Sanders E, Moriya S, Noël C, Takasu H, Fast NM, Delgado-Viscogliosi P, Ohkuma M, Kudo T, Capron M, Palmer JD, Keeling PJ, Viscogliosi E. Molecular phylogenies of Parabasalia inferred from four protein genes and comparison with rRNA trees. Molecular Phylogenetics and Evolution. 31: 572-80. PMID 15062795 DOI: 10.1016/J.Ympev.2003.09.013 |
0.623 |
|
| 2004 |
Qiu YL, Palmer JD. Erratum: Many independent origins of trans splicing of a plant mitochondrial group II intron (Journal of Molecular Evolution (2004) 59 (80-89)) Journal of Molecular Evolution. 59: 722-724. DOI: 10.1007/S00239-004-5951-Y |
0.438 |
|
| 2003 |
Adams KL, Palmer JD. Evolution of mitochondrial gene content: gene loss and transfer to the nucleus. Molecular Phylogenetics and Evolution. 29: 380-95. PMID 14615181 DOI: 10.1016/S1055-7903(03)00194-5 |
0.756 |
|
| 2003 |
Bergthorsson U, Adams KL, Thomason B, Palmer JD. Widespread horizontal transfer of mitochondrial genes in flowering plants. Nature. 424: 197-201. PMID 12853958 DOI: 10.1038/Nature01743 |
0.761 |
|
| 2003 |
Cummings MP, Nugent JM, Olmstead RG, Palmer JD. Phylogenetic analysis reveals five independent transfers of the chloroplast gene rbcL to the mitochondrial genome in angiosperms. Current Genetics. 43: 131-8. PMID 12695853 DOI: 10.1007/S00294-003-0378-3 |
0.722 |
|
| 2003 |
Palmer JD. The symbiotic birth and spread of plastids: How many times and whodunit? Journal of Phycology. 39: 4-11. DOI: 10.1046/J.1529-8817.2003.02185.X |
0.488 |
|
| 2002 |
Adams KL, Qiu YL, Stoutemyer M, Palmer JD. Punctuated evolution of mitochondrial gene content: high and variable rates of mitochondrial gene loss and transfer to the nucleus during angiosperm evolution. Proceedings of the National Academy of Sciences of the United States of America. 99: 9905-12. PMID 12119382 DOI: 10.1073/Pnas.042694899 |
0.759 |
|
| 2002 |
Adams KL, Daley DO, Whelan J, Palmer JD. Genes for two mitochondrial ribosomal proteins in flowering plants are derived from their chloroplast or cytosolic counterparts. The Plant Cell. 14: 931-43. PMID 11971146 DOI: 10.1105/Tpc.010483 |
0.768 |
|
| 2002 |
Daley DO, Adams KL, Clifton R, Qualmann S, Millar AH, Palmer JD, Pratje E, Whelan J. Gene transfer from mitochondrion to nucleus: novel mechanisms for gene activation from Cox2. The Plant Journal : For Cell and Molecular Biology. 30: 11-21. PMID 11967089 DOI: 10.1046/J.1365-313X.2002.01263.X |
0.715 |
|
| 2001 |
Adams KL, Ong HC, Palmer JD. Mitochondrial gene transfer in pieces: fission of the ribosomal protein gene rpl2 and partial or complete gene transfer to the nucleus. Molecular Biology and Evolution. 18: 2289-97. PMID 11719578 DOI: 10.1093/Oxfordjournals.Molbev.A003775 |
0.809 |
|
| 2001 |
Gugerli F, Sperisen C, Büchler U, Brunner I, Brodbeck S, Palmer JD, Qiu YL. The evolutionary split of Pinaceae from other conifers: Evidence from an intron loss and a multigene phylogeny Molecular Phylogenetics and Evolution. 21: 167-175. PMID 11697913 DOI: 10.1006/Mpev.2001.1004 |
0.554 |
|
| 2001 |
Keeling PJ, Palmer JD. Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase. Proceedings of the National Academy of Sciences of the United States of America. 98: 10745-50. PMID 11526220 DOI: 10.1073/Pnas.191337098 |
0.667 |
|
| 2001 |
Adams KL, Rosenblueth M, Qiu YL, Palmer JD. Multiple losses and transfers to the nucleus of two mitochondrial succinate dehydrogenase genes during angiosperm evolution. Genetics. 158: 1289-300. PMID 11454775 |
0.721 |
|
| 2001 |
Millen RS, Olmstead RG, Adams KL, Palmer JD, Lao NT, Heggie L, Kavanagh TA, Hibberd JM, Gray JC, Morden CW, Calie PJ, Jermiin LS, Wolfe KH. Many parallel losses of infA from chloroplast DNA during angiosperm evolution with multiple independent transfers to the nucleus. The Plant Cell. 13: 645-58. PMID 11251102 DOI: 10.1105/Tpc.13.3.645 |
0.792 |
|
| 2000 |
Nickrent DL, Parkinson CL, Palmer JD, Duff RJ. Multigene phylogeny of land plants with special reference to bryophytes and the earliest land plants. Molecular Biology and Evolution. 17: 1885-95. PMID 11110905 DOI: 10.1093/Oxfordjournals.Molbev.A026290 |
0.471 |
|
| 2000 |
Adams KL, Daley DO, Qiu YL, Whelan J, Palmer JD. Repeated, recent and diverse transfers of a mitochondrial gene to the nucleus in flowering plants. Nature. 408: 354-7. PMID 11099041 DOI: 10.1038/35042567 |
0.756 |
|
| 2000 |
Keeling PJ, Palmer JD. Parabasalian flagellates are ancient eukaryotes. Nature. 405: 635-7. PMID 10864312 DOI: 10.1038/35015167 |
0.671 |
|
| 2000 |
Palmer JD, Adams KL, Cho Y, Parkinson CL, Qiu YL, Song K. Dynamic evolution of plant mitochondrial genomes: mobile genes and introns and highly variable mutation rates. Proceedings of the National Academy of Sciences of the United States of America. 97: 6960-6. PMID 10860957 DOI: 10.1073/Pnas.97.13.6960 |
0.762 |
|
| 2000 |
Palmer JD. Molecular evolution: A single birth of all plastids? Nature. 405: 32-33. PMID 10811205 DOI: 10.1038/35011184 |
0.483 |
|
| 2000 |
Chaw SM, Parkinson CL, Cheng Y, Vincent TM, Palmer JD. Seed plant phylogeny inferred from all three plant genomes: monophyly of extant gymnosperms and origin of Gnetales from conifers. Proceedings of the National Academy of Sciences of the United States of America. 97: 4086-91. PMID 10760277 DOI: 10.1073/Pnas.97.8.4086 |
0.577 |
|
| 2000 |
Besendahl A, Qiu YL, Lee J, Palmer JD, Bhattacharya D. The cyanobacterial origin and vertical transmission of the plastid tRNA(Leu) group-I intron Current Genetics. 37: 12-23. PMID 10672439 DOI: 10.1007/S002940050002 |
0.521 |
|
| 2000 |
Keeling PJ, Luker MA, Palmer JD. Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungi. Molecular Biology and Evolution. 17: 23-31. PMID 10666703 DOI: 10.1093/Oxfordjournals.Molbev.A026235 |
0.528 |
|
| 2000 |
Schisler NJ, Palmer JD. The IDB and IEDB: Intron sequence and evolution databases Nucleic Acids Research. 28: 181-184. PMID 10592220 DOI: 10.1093/Nar/28.1.181 |
0.462 |
|
| 1999 |
Parkinson CL, Adams KL, Palmer JD. Multigene analyses identify the three earliest lineages of extant flowering plants. Current Biology : Cb. 9: 1485-8. PMID 10607592 DOI: 10.1016/S0960-9822(00)80119-0 |
0.705 |
|
| 1999 |
Adams KL, Song K, Roessler PG, Nugent JM, Doyle JL, Doyle JJ, Palmer JD. Intracellular gene transfer in action: dual transcription and multiple silencings of nuclear and mitochondrial cox2 genes in legumes. Proceedings of the National Academy of Sciences of the United States of America. 96: 13863-8. PMID 10570164 DOI: 10.1073/Pnas.96.24.13863 |
0.746 |
|
| 1999 |
Cho Y, Palmer JD. Multiple acquisitions via horizontal transfer of a group I intron in the mitochondrial cox1 gene during evolution of the Araceae family Molecular Biology and Evolution. 16: 1155-1165. PMID 10486971 DOI: 10.1093/Oxfordjournals.Molbev.A026206 |
0.568 |
|
| 1999 |
Turner S, Pryer KM, Miao VPW, Palmer JD. Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis Journal of Eukaryotic Microbiology. 46: 327-338. PMID 10461381 DOI: 10.1111/J.1550-7408.1999.Tb04612.X |
0.429 |
|
| 1999 |
Keeling PJ, Palmer JD, Donald RG, Roos DS, Waller RF, McFadden GI. Shikimate pathway in apicomplexan parasites. Nature. 397: 219-20. PMID 9930696 DOI: 10.1038/16618 |
0.654 |
|
| 1999 |
Qiu YL, Palmer JD. Phylogeny of early land plants: Insights from genes and genomes Trends in Plant Science. 4: 26-30. DOI: 10.1016/S1360-1385(98)01361-2 |
0.451 |
|
| 1999 |
Knox EB, Palmer JD. The chloroplast genome arrangement of Lobelia thuliniana (Lobeliaceae): Expansion of the inverted repeat in an ancestor of the Campanulales Plant Systematics and Evolution. 214: 49-64. DOI: 10.1007/Bf00985731 |
0.473 |
|
| 1998 |
Cho Y, Qiu YL, Kuhlman P, Palmer JD. Explosive invasion of plant mitochondria by a group I intron Proceedings of the National Academy of Sciences of the United States of America. 95: 14244-14249. PMID 9826685 DOI: 10.1073/Pnas.95.24.14244 |
0.593 |
|
| 1998 |
Qiu YL, Cho Y, Cox JC, Palmer JD. The gain of three mitochondrial introns identifies liverworts as the earliest land plants. Nature. 394: 671-4. PMID 9716129 DOI: 10.1038/29286 |
0.406 |
|
| 1997 |
Stoltzfus A, Logsdon JM, Palmer JD, Doolittle WF. Intron "sliding" and the diversity of intron positions. Proceedings of the National Academy of Sciences of the United States of America. 94: 10739-44. PMID 9380704 DOI: 10.1073/Pnas.94.20.10739 |
0.557 |
|
| 1997 |
Palmer JD. Genome evolution: The mitochondrion that time forgot Nature. 387: 454-455. PMID 9168103 DOI: 10.1038/387454A0 |
0.4 |
|
| 1997 |
Cosner ME, Jansen RK, Palmer JD, Downie SR. The highly rearranged chloroplast genome of Trachelium caeruleum (Campanulaceae): Multiple inversions, inverted repeat expansion and contraction, transposition, insertions/deletions, and several repeat families Current Genetics. 31: 419-429. PMID 9162114 DOI: 10.1007/S002940050225 |
0.678 |
|
| 1997 |
Köhler S, Delwiche CF, Denny PW, Tilney LG, Webster P, Wilson RJ, Palmer JD, Roos DS. A plastid of probable green algal origin in Apicomplexan parasites. Science (New York, N.Y.). 275: 1485-9. PMID 9045615 DOI: 10.1126/Science.275.5305.1485 |
0.705 |
|
| 1997 |
Palmer JD. Organelle genomes: Going, going, gone! Science. 275: 790-791. PMID 9036544 DOI: 10.1126/Science.275.5301.790 |
0.503 |
|
| 1997 |
Stassen NY, Logsdon JM, Vora GJ, Offenberg HH, Palmer JD, Zolan ME. Isolation and characterization of rad51 orthologs from Coprinus cinereus and Lycopersicon esculentum, and phylogenetic analysis of eukaryotic recA homologs. Current Genetics. 31: 144-57. PMID 9021132 DOI: 10.1007/S002940050189 |
0.52 |
|
| 1997 |
Olmstead RG, Palmer JD. Implications for the phylogeny, classification, and biogeography of Solanum from cpDNA restriction site variation Systematic Botany. 22: 19-29. DOI: 10.2307/2419675 |
0.55 |
|
| 1996 |
Barns SM, Delwiche CF, Palmer JD, Dawson SC, Hershberger KL, Pace NR. Phylogenetic perspective on microbial life in hydrothermal ecosystems, past and present. Ciba Foundation Symposium. 202: 24-32; discussion 32. PMID 9243008 |
0.597 |
|
| 1996 |
Barns SM, Delwiche CF, Palmer JD, Pace NR. Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 93: 9188-93. PMID 8799176 DOI: 10.1073/Pnas.93.17.9188 |
0.659 |
|
| 1996 |
Baldauf SL, Palmer JD, Doolittle WF. The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny Proceedings of the National Academy of Sciences of the United States of America. 93: 7749-7754. PMID 8755547 DOI: 10.1073/Pnas.93.15.7749 |
0.766 |
|
| 1996 |
Palmer JD, Delwiche CF. Second-hand chloroplasts and the case of the disappearing nucleus. Proceedings of the National Academy of Sciences of the United States of America. 93: 7432-5. PMID 8755491 DOI: 10.1073/Pnas.93.15.7432 |
0.735 |
|
| 1996 |
Delwiche CF, Palmer JD. Rampant horizontal transfer and duplication of rubisco genes in eubacteria and plastids. Molecular Biology and Evolution. 13: 873-82. PMID 8754222 DOI: 10.1093/Oxfordjournals.Molbev.A025647 |
0.742 |
|
| 1996 |
Doyle JJ, Doyle JL, Ballenger JA, Palmer JD. The distribution and phylogenetic significance of a 50-kb chloroplast DNA inversion in the flowering plant family Leguminosae. Molecular Phylogenetics and Evolution. 5: 429-38. PMID 8728401 DOI: 10.1006/Mpev.1996.0038 |
0.483 |
|
| 1995 |
Palmer JD. Rubisco rules fall; Gene transfer triumphs Bioessays. 17: 1005-1008. PMID 8634059 DOI: 10.1002/Bies.950171202 |
0.48 |
|
| 1995 |
Kuhlman P, Palmer JD. Isolation, expression, and evolution of the gene encoding mitochondrial elongation factor Tu in Arabidopsis thaliana Plant Molecular Biology. 29: 1057-1070. PMID 8555448 DOI: 10.1007/Bf00014977 |
0.587 |
|
| 1995 |
Ems SC, Morden CW, Dixon CK, Wolfe KH, dePamphilis CW, Palmer JD. Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana. Plant Molecular Biology. 29: 721-33. PMID 8541499 DOI: 10.1007/Bf00041163 |
0.542 |
|
| 1995 |
Logsdon JM, Tyshenko MG, Dixon C, D-Jafari J, Walker VK, Palmer JD. Seven newly discovered intron positions in the triose-phosphate isomerase gene: evidence for the introns-late theory. Proceedings of the National Academy of Sciences of the United States of America. 92: 8507-11. PMID 7667320 DOI: 10.1073/Pnas.92.18.8507 |
0.512 |
|
| 1995 |
Delwiche CF, Kuhsel M, Palmer JD. Phylogenetic analysis of tufA sequences indicates a cyanobacterial origin of all plastids. Molecular Phylogenetics and Evolution. 4: 110-28. PMID 7663757 DOI: 10.1006/Mpev.1995.1012 |
0.694 |
|
| 1995 |
Vaughn JC, Mason MT, Sper-Whitis GL, Kuhlman P, Palmer JD. Fungal origin by horizontal transfer of a plant mitochondrial group I intron in the chimeric CoxI gene of Peperomia. Journal of Molecular Evolution. 41: 563-72. PMID 7490770 DOI: 10.1007/Bf00175814 |
0.625 |
|
| 1995 |
Knox EB, Palmer JD. Chloroplast DNA variation and the recent radiation of the giant senecios (Asteraceae) on the tall mountains of eastern Africa Proceedings of the National Academy of Sciences of the United States of America. 92: 10349-10353. PMID 7479782 DOI: 10.1073/Pnas.92.22.10349 |
0.397 |
|
| 1995 |
Doyle JJ, Doyle JL, Palmer JD. Multiple Independent Losses of Two Genes and One Intron from Legume Chloroplast Genomes Systematic Botany. 20: 272. DOI: 10.2307/2419496 |
0.531 |
|
| 1995 |
Knox EB, Palmer JD. The origin of Dendrosenecio within the Senecioneae (Asteraceae) based on chloroplast DNA evidence American Journal of Botany. 82: 1567-1573. DOI: 10.1002/J.1537-2197.1995.Tb13859.X |
0.36 |
|
| 1994 |
Downie SR, Katz-Downie DS, Wolfe KH, Calie PJ, Palmer JD. Structure and evolution of the largest chloroplast gene (ORF2280): internal plasticity and multiple gene loss during angiosperm evolution. Current Genetics. 25: 367-78. PMID 8082181 DOI: 10.1007/Bf00351492 |
0.577 |
|
| 1994 |
Hoot SB, Palmer JD. Structural rearrangements, including parallel inversions, within the chloroplast genome of Anemone and related genera Journal of Molecular Evolution. 38: 274-281. PMID 8006994 DOI: 10.1007/Bf00176089 |
0.48 |
|
| 1994 |
Hoot SB, Reznicek AA, Palmer JD. Phylogenetic relationships in Anemone (Ranunculaceae) based on morphology and chloroplast DNA Systematic Botany. 19: 169-200. DOI: 10.2307/2419720 |
0.411 |
|
| 1994 |
Downie SR, Palmer JD. A Chloroplast DNA Phylogeny of the Caryophyllales Based on Structural and Inverted Repeat Restriction Site Variation Systematic Botany. 19: 236. DOI: 10.2307/2419599 |
0.488 |
|
| 1994 |
Price RA, Palmer JD, Al-Shehbaz IA. 1 Systematic Relationships of Arabidopsis: A Molecular and Morphological Perspective Cold Spring Harbor Monograph Archive. 27: 7-19. DOI: 10.1101/087969428.27.7 |
0.439 |
|
| 1994 |
Palmer JD, Downie SR, Nugent JM, Brandt P, Unseld M, Klein M, Brennicke A, Schuster W, Börner T. 3 Chloroplast and Mitochondrial DNAs of Arabidopsis thaliana: Conventional Genomes in an Unconventional Plant Cold Spring Harbor Monograph Archive. 27: 37-62. DOI: 10.1101/087969428.27.37 |
0.587 |
|
| 1994 |
Olmstead RG, Palmer JD. Chloroplast DNA systematics: a review of methods and data analysis American Journal of Botany. 81: 1205-1224. DOI: 10.1002/J.1537-2197.1994.Tb15615.X |
0.659 |
|
| 1993 |
Nugent JM, Palmer JD. Characterization of the Brassica campestris mitochondrial gene for subunit six of NADH dehydrogenase: nad6 is present in the mitochondrion of a wide range of flowering plants Current Genetics. 23: 148-153. PMID 8431956 DOI: 10.1007/Bf00352014 |
0.586 |
|
| 1993 |
Baldauf SL, Palmer JD. Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proceedings of the National Academy of Sciences of the United States of America. 90: 11558-62. PMID 8265589 DOI: 10.1073/Pnas.90.24.11558 |
0.713 |
|
| 1993 |
Michaels HJ, Scott KM, Olmstead RG, Szaro T, Jansen RK, Palmer JD. Interfamilial Relationships of the Asteraceae: Insights from rbcL Sequence Variation Annals of the Missouri Botanical Garden. 80: 742. DOI: 10.2307/2399858 |
0.699 |
|
| 1993 |
Olmstead RG, Bremer B, Scott KM, Palmer JD. A Parsimony Analysis of the Asteridae Sensu Lato Based on rbcL Sequences Annals of the Missouri Botanical Garden. 80: 700. DOI: 10.2307/2399855 |
0.568 |
|
| 1993 |
Rodman J, Price RA, Karol K, Conti E, Systma KJ, Palmer JD. Nucleotide Sequences of the rbcL Gene Indicate Monophyly of Mustard Oil Plants Annals of the Missouri Botanical Garden. 80: 686. DOI: 10.2307/2399854 |
0.4 |
|
| 1993 |
Price RA, Palmer JD. Phylogenetic relationships of the Geraniaceae and Geraniales from rbcL sequence comparisons Annals of the Missouri Botanical Garden. 80: 661-671. DOI: 10.2307/2399852 |
0.433 |
|
| 1993 |
Knox E, Downie S, Palmer J. Chloroplast genome rearrangements and the evolution of giant lobelias from herbaceous ancestors Molecular Biology and Evolution. 10: 414-430. DOI: 10.1093/Oxfordjournals.Molbev.A040017 |
0.475 |
|
| 1992 |
Wolfe KH, Morden CW, Palmer JD. Small single-copy region of plastid DNA in the non-photosynthetic angiosperm Epifagus virginiana contains only two genes. Differences among dicots, monocots and bryophytes in gene organization at a non-bioenergetic locus. Journal of Molecular Biology. 223: 95-104. PMID 1731088 DOI: 10.1016/0022-2836(92)90718-Y |
0.546 |
|
| 1992 |
Wolfe KH, Katz-Downie DS, Morden CW, Palmer JD. Evolution of the plastid ribosomal RNA operon in a nongreen parasitic plant: accelerated sequence evolution, altered promoter structure, and tRNA pseudogenes. Plant Molecular Biology. 18: 1037-48. PMID 1600142 DOI: 10.1007/Bf00047707 |
0.526 |
|
| 1992 |
Palmer JD, Soltis D, Soltis P. Large size and complex structure of mitochondrial DNA in two nonflowering land plants. Current Genetics. 21: 125-9. PMID 1568256 DOI: 10.1007/Bf00318471 |
0.607 |
|
| 1992 |
Gass DA, Makaroff CA, Palmer JD. Variable intron content of the NADH dehydrogenase subunit 4 gene of plant mitochondria Current Genetics. 21: 423-430. PMID 1525869 DOI: 10.1007/Bf00351705 |
0.512 |
|
| 1992 |
Wolfe KH, Morden CW, Ems SC, Palmer JD. Rapid evolution of the plastid translational apparatus in a nonphotosynthetic plant: loss or accelerated sequence evolution of tRNA and ribosomal protein genes. Journal of Molecular Evolution. 35: 304-17. PMID 1404416 DOI: 10.1007/Bf00161168 |
0.578 |
|
| 1992 |
Wolfe KH, Morden CW, Palmer JD. Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant. Proceedings of the National Academy of Sciences of the United States of America. 89: 10648-52. PMID 1332054 DOI: 10.1073/Pnas.89.22.10648 |
0.594 |
|
| 1992 |
Morden CW, Delwiche CF, Kuhsel M, Palmer JD. Gene phylogenies and the endosymbiotic origin of plastids. Bio Systems. 28: 75-90. PMID 1292669 DOI: 10.1016/0303-2647(92)90010-V |
0.731 |
|
| 1992 |
Kim K, Jansen RK, Wallace RS, Michaels HJ, Palmer JD. Phylogenetic Implications of rbcL Sequence Variation in the Asteraceae Annals of the Missouri Botanical Garden. 79: 428. DOI: 10.2307/2399779 |
0.779 |
|
| 1992 |
Olmstead RG, Palmer JD. A Chloroplast DNA Phylogeny of the Solanaceae: Subfamilial Relationships and Character Evolution Annals of the Missouri Botanical Garden. 79: 346. DOI: 10.2307/2399773 |
0.563 |
|
| 1992 |
Donoghue MJ, Olmstead RG, Smith JF, Palmer JD. Phylogenetic Relationships of Dipsacales Based on rbcL Sequences Annals of the Missouri Botanical Garden. 79: 333. DOI: 10.2307/2399772 |
0.621 |
|
| 1992 |
Downie SR, Palmer JD. Restriction Site Mapping of the Chloroplast DNA Inverted Repeat: A Molecular Phylogeny of the Asteridae Annals of the Missouri Botanical Garden. 79: 266. DOI: 10.2307/2399769 |
0.371 |
|
| 1992 |
Olmstead RG, Michaels HJ, Scott KM, Palmer JD. Monophyly of the Asteridae and Identification of Their Major Lineages Inferred From DNA Sequences of rbcL Annals of the Missouri Botanical Garden. 79: 249. DOI: 10.2307/2399768 |
0.602 |
|
| 1992 |
Bremer K, Jansen RK, Karis PO, Källersjö M, Keeley SC, Kim K‐, Michaels HJ, Palmer JD, Wallace RS. A review of the phylogeny and classification of the Asteraceae Nordic Journal of Botany. 12: 141-148. DOI: 10.1111/J.1756-1051.1992.Tb01281.X |
0.731 |
|
| 1992 |
Bourne CM, Palmer JD, Stoermer EF. ORGANIZATION OF THE CHLOROPLAST GENOME OF THE FRESHWATER CENTRIC DIATOM CYCLOTELLA MENEGHINIANA Journal of Phycology. 28: 347-355. DOI: 10.1111/J.0022-3646.1992.00347.X |
0.547 |
|
| 1991 |
Downie SR, Olmstead RG, Zurawski G, Soltis DE, Soltis PS, Watson JC, Palmer JD. SIX INDEPENDENT LOSSES OF THE CHLOROPLAST DNA rpl2 INTRON IN DICOTYLEDONS: MOLECULAR AND PHYLOGENETIC IMPLICATIONS. Evolution; International Journal of Organic Evolution. 45: 1245-1259. PMID 28564183 DOI: 10.1111/J.1558-5646.1991.Tb04390.X |
0.671 |
|
| 1991 |
Morden CW, Wolfe KH, dePamphilis CW, Palmer JD. Plastid translation and transcription genes in a non-photosynthetic plant: intact, missing and pseudo genes. The Embo Journal. 10: 3281-8. PMID 1915295 DOI: 10.1002/J.1460-2075.1991.Tb04892.X |
0.579 |
|
| 1991 |
Gantt JS, Baldauf SL, Calie PJ, Weeden NF, Palmer JD. Transfer of rpl22 to the nucleus greatly preceded its loss from the chloroplast and involved the gain of an intron. The Embo Journal. 10: 3073-8. PMID 1915281 DOI: 10.1002/J.1460-2075.1991.Tb07859.X |
0.794 |
|
| 1991 |
Wolfe KH, Morden CW, Palmer JD. Ins and outs of plastid genome evolution. Current Opinion in Genetics & Development. 1: 523-9. PMID 1822284 DOI: 10.1016/S0959-437X(05)80202-3 |
0.571 |
|
| 1991 |
Palmer JD, Logsdon JM. The recent origins of introns. Current Opinion in Genetics & Development. 1: 470-7. PMID 1822279 DOI: 10.1016/0960-9822(92)90426-B |
0.448 |
|
| 1991 |
Taylor GW, Wolfe KH, Morden CW, dePamphilis CW, Palmer JD. Lack of a functional plastid tRNA(Cys) gene is associated with loss of photosynthesis in a lineage of parasitic plants. Current Genetics. 20: 515-8. PMID 1723664 DOI: 10.1007/Bf00334780 |
0.559 |
|
| 1991 |
Nugent JM, Palmer JD. RNA-mediated transfer of the gene coxII from the mitochondrion to the nucleus during flowering plant evolution Cell. 66: 473-481. PMID 1714355 DOI: 10.1016/0092-8674(81)90011-8 |
0.55 |
|
| 1991 |
Shirzadegan M, Palmer JD, Christey M, Earle ED. Patterns of mitochondrial DNA instability in Brassica campestris cultured cells. Plant Molecular Biology. 16: 21-37. PMID 1653628 DOI: 10.1007/Bf00017914 |
0.447 |
|
| 1991 |
Makaroff CA, Apel IJ, Palmer JD. The role of coxI-associated repeated sequences in plant mitochondrial DNA rearrangements and radish cytoplasmic male sterility Current Genetics. 19: 183-190. PMID 1651176 DOI: 10.1007/Bf00336485 |
0.542 |
|
| 1991 |
Crawford DJ, Palmer JD, Kobayashi M. Chloroplast DNA Restriction Site Variation, Phylogenetic Relationships, and Character Evolution Among Sections of North Americn Coreopsis (Asteraceae) Systematic Botany. 16: 211. DOI: 10.2307/2419274 |
0.358 |
|
| 1991 |
Jansen RK, Michaels HJ, Palmer JD. Phylogeny and Character Evolution in the Asteraceae Based on Chloroplast DNA Restriction Site Mapping Systematic Botany. 16: 98. DOI: 10.2307/2418976 |
0.575 |
|
| 1990 |
Jansen RK, Holsinger KE, Michaels HJ, Palmer JD. PHYLOGENETIC ANALYSIS OF CHLOROPLAST DNA RESTRICTION SITE DATA AT HIGHER TAXONOMIC LEVELS: AN EXAMPLE FROM THE ASTERACEAE. Evolution; International Journal of Organic Evolution. 44: 2089-2105. PMID 28564424 DOI: 10.1111/J.1558-5646.1990.Tb04314.X |
0.55 |
|
| 1990 |
Lavin M, Doyle JJ, Palmer JD. EVOLUTIONARY SIGNIFICANCE OF THE LOSS OF THE CHLOROPLAST-DNA INVERTED REPEAT IN THE LEGUMINOSAE SUBFAMILY PAPILIONOIDEAE. Evolution; International Journal of Organic Evolution. 44: 390-402. PMID 28564377 DOI: 10.1111/J.1558-5646.1990.Tb05207.X |
0.372 |
|
| 1990 |
Baldauf SL, Manhart JR, Palmer JD. Different fates of the chloroplast tufA gene following its transfer to the nucleus in green algae. Proceedings of the National Academy of Sciences of the United States of America. 87: 5317-21. PMID 2371274 DOI: 10.1073/Pnas.87.14.5317 |
0.77 |
|
| 1990 |
Manhart JR, Palmer JD. The gain of two chloroplast tRNA introns marks the green algal ancestors of land plants Nature. 345: 268-270. PMID 2333097 DOI: 10.1038/345268A0 |
0.338 |
|
| 1990 |
Baldauf SL, Palmer JD. Evolutionary transfer of the chloroplast tufA gene to the nucleus. Nature. 344: 262-5. PMID 2314461 DOI: 10.1038/344262A0 |
0.785 |
|
| 1990 |
DePamphilis CW, Palmer JD. Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant Nature. 348: 337-339. PMID 2250706 DOI: 10.1038/348337A0 |
0.575 |
|
| 1990 |
Makaroff CA, Apel IJ, Palmer JD. Characterization of radish mitochondrial atpA: influence of nuclear background on transcription of atpA-associated sequences and relationship with male sterility Plant Molecular Biology. 15: 735-746. PMID 2151720 DOI: 10.1007/Bf00016123 |
0.478 |
|
| 1990 |
Palmer JD. Contrasting modes and tempos of genome evolution in land plant organelles. Trends in Genetics. 6: 115-120. PMID 2132730 DOI: 10.1016/0168-9525(90)90125-P |
0.581 |
|
| 1990 |
Kuhsel MG, Strickland R, Palmer JD. An ancient group I intron shared by eubacteria and chloroplasts. Science (New York, N.Y.). 250: 1570-3. PMID 2125748 DOI: 10.1126/Science.2125748 |
0.509 |
|
| 1990 |
Bruneau A, Doyle JJ, Palmer JD. A Chloroplast DNA Inversion as a Subtribal Character in the Phaseoleae (Leguminosae) Systematic Botany. 15: 378-386. DOI: 10.2307/2419351 |
0.463 |
|
| 1990 |
Manhart JR, Hoshaw RW, Palmer JD. UNIQUE CHLOROPLAST GENOME IN SPIROGYRA MAXIMA (CHLOROPHYTA) REVEALED BY PHYSICAL AND GENE MAPPING Journal of Phycology. 26: 490-494. DOI: 10.1111/J.0022-3646.1990.00490.X |
0.561 |
|
| 1989 |
Johnson LB, Palmer JD. Heteroplasmy of chloroplast DNA in Medicago. Plant Molecular Biology. 12: 3-11. PMID 24272712 DOI: 10.1007/Bf00017442 |
0.386 |
|
| 1989 |
Shirzadegan M, Christey M, Earle ED, Palmer JD. Rearrangement, amplification, and assortment of mitochondrial DNA molecules in cultured cells of Brassica campestris. Theoretical and Applied Genetics. 77: 17-25. PMID 24232468 DOI: 10.1007/Bf00292310 |
0.409 |
|
| 1989 |
Manhart JR, Kelly K, Dudock BS, Palmer JD. Unusual characteristics of Codium fragile chloroplast DNA revealed by physical and gene mapping Mgg Molecular &Amp; General Genetics. 216: 417-421. PMID 2747622 DOI: 10.1007/Bf00334385 |
0.538 |
|
| 1989 |
Bruns TD, Fogel R, White TJ, Palmer JD. Accelerated evolution of a false-truffle from a mushroom ancestor. Nature. 339: 140-2. PMID 2716834 DOI: 10.1038/339140A0 |
0.654 |
|
| 1989 |
Milligan BG, Hampton JN, Palmer JD. Dispersed repeats and structural reorganization in subclover chloroplast DNA. Molecular Biology and Evolution. 6: 355-68. PMID 2615639 DOI: 10.1093/Oxfordjournals.Molbev.A040558 |
0.535 |
|
| 1989 |
Bruns TD, Palmer JD. Evolution of mushroom mitochondrial DNA: Suillus and related genera. Journal of Molecular Evolution. 28: 349-62. PMID 2499689 DOI: 10.1007/Bf02103431 |
0.733 |
|
| 1989 |
Chase MW, Palmer JD. Chloroplast DNA systematics of lilioid monocots: resources, feasibility, and an example from the Orchidaceae American Journal of Botany. 76: 1720-1730. DOI: 10.1002/J.1537-2197.1989.Tb15162.X |
0.616 |
|
| 1988 |
Jansen RK, Palmer JD. PHYLOGENETIC IMPLICATIONS OF CHLOROPLAST DNA RESTRICTION SITE VARIATION IN THE MUTISIEAE (ASTERACEAE). American Journal of Botany. 75: 753-766. PMID 30139093 DOI: 10.1002/J.1537-2197.1988.Tb13496.X |
0.576 |
|
| 1988 |
Rieseberg LH, Soltis DE, Palmer JD. A MOLECULAR REEXAMINATION OF INTROGRESSION BETWEEN HELIANTHUS ANNUUS AND H. BOLANDERI (COMPOSITAE). Evolution; International Journal of Organic Evolution. 42: 227-238. PMID 28567846 DOI: 10.1111/J.1558-5646.1988.Tb04127.X |
0.338 |
|
| 1988 |
Nugent JM, Palmer JD. Location, identity, amount and serial entry of chloroplast DNA sequences in crucifer mitochondrial DNAs Current Genetics. 14: 501-509. PMID 3224389 DOI: 10.1007/Bf00521276 |
0.592 |
|
| 1988 |
Palmer JD, Herbon LA. Plant mitochondrial DNA evolved rapidly in structure, but slowly in sequence Journal of Molecular Evolution. 28: 87-97. PMID 3148746 DOI: 10.1007/Bf02143500 |
0.511 |
|
| 1988 |
Makaroff CA, Palmer JD. Mitochondrial DNA rearrangements and transcriptional alterations in the male-sterile cytoplasm of Ogura radish Molecular and Cellular Biology. 8: 1474-1480. PMID 2837643 DOI: 10.1128/Mcb.8.4.1474 |
0.543 |
|
| 1988 |
Strauss SH, Palmer JD, Howe GT, Doerksen AH. Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged Proceedings of the National Academy of Sciences of the United States of America. 85: 3898-3902. PMID 2836862 DOI: 10.1073/PNAS.85.11.3898 |
0.393 |
|
| 1988 |
Siculella L, Palmer JD. Physical and gene organization of mitochondrial DNA in fertile and male sterile sunflower. CMS-associated alterations in structure and transcription of the atpA gene. Nucleic Acids Research. 16: 3787-3799. PMID 2836801 DOI: 10.1093/Nar/16.9.3787 |
0.548 |
|
| 1988 |
Bruns TD, Palmer JD, Shumard DS, Grossman LI, Hudspeth ME. Mitochondrial DNAs of Suillus: three fold size change in molecules that share a common gene order. Current Genetics. 13: 49-56. PMID 2834103 DOI: 10.1007/Bf00365756 |
0.699 |
|
| 1988 |
Palmer JD, Jansen RK, Michaels HJ, Chase MW, Manhart JR. Chloroplast DNA Variation and Plant Phylogeny Annals of the Missouri Botanical Garden. 75: 1180. DOI: 10.2307/2399279 |
0.649 |
|
| 1988 |
Woodbury NW, Roberts LL, Palmer JD, Thompson WF. A transcription map of the pea chloroplast genome Current Genetics. 14: 75-89. DOI: 10.1007/Bf00405857 |
0.46 |
|
| 1988 |
Palmer JD, Osorio B, Thompson WF. Evolutionary significance of inversions in legume chloroplast DNAs Current Genetics. 14: 65-74. DOI: 10.1007/Bf00405856 |
0.554 |
|
| 1987 |
Palmer JD, Nugent JM, Herbon LA. Unusual structure of geranium chloroplast DNA: A triple-sized inverted repeat, extensive gene duplications, multiple inversions, and two repeat families. Proceedings of the National Academy of Sciences of the United States of America. 84: 769-773. PMID 16593810 DOI: 10.1073/Pnas.84.3.769 |
0.556 |
|
| 1987 |
Makaroff CA, Palmer JD. Extensive mitochondrial specific transcription of the Brassica campestris mitochondrial genome Nucleic Acids Research. 15: 5141-5156. PMID 3601669 DOI: 10.1093/Nar/15.13.5141 |
0.564 |
|
| 1987 |
Palmer JD, Herbon LA. Unicircular structure of the Brassica hirta mitochondrial genome. Current Genetics. 11: 565-570. PMID 2836082 DOI: 10.1007/Bf00384620 |
0.544 |
|
| 1987 |
Palmer JD. Chloroplast DNA Evolution and Biosystematic Uses of Chloroplast DNA Variation The American Naturalist. 130. DOI: 10.1086/284689 |
0.303 |
|
| 1987 |
Jansen RK, Palmer JD. Chloroplast DNA from lettuce and Barnadesia (Asteraceae): structure, gene localization, and characterization of a large inversion Current Genetics. 11: 553-564. DOI: 10.1007/Bf00384619 |
0.68 |
|
| 1987 |
Palmer JD, Osorio B, Aldrich J, Thompson WF. Chloroplast DNA evolution among legumes: Loss of a large inverted repeat occurred prior to other sequence rearrangements Current Genetics. 11: 275-286. DOI: 10.1007/Bf00355401 |
0.521 |
|
| 1987 |
Robertson D, Palmer JD, Earle ED, Mutschler MA. Analysis of organelle genomes in a somatic hybrid derived from cytoplasmic male-sterile Brassica oleracea and atrazine-resistant B. campestris Theoretical and Applied Genetics. 74: 303-309. DOI: 10.1007/Bf00274711 |
0.341 |
|
| 1986 |
Palmer JD, Herbon LA. Tricircular mitochondrial genomes of Brassica and Raphanus: reversal of repeat configurations by inversion. Nucleic Acids Research. 14: 9755-9764. PMID 3027662 DOI: 10.1093/Nar/14.24.9755 |
0.5 |
|
| 1986 |
Stern DB, Palmer JD. Tripartite mitochondrial genome of spinach: physical structure, mitochondrial gene mapping, and locations of transposed chloroplast DNA sequences. Nucleic Acids Research. 14: 5651-66. PMID 3016660 DOI: 10.1093/NAR/14.14.5651 |
0.458 |
|
| 1986 |
Palmer JD. Isolation and structural analysis of chloroplast DNA Methods in Enzymology. 118: 167-186. DOI: 10.1016/0076-6879(86)18072-4 |
0.414 |
|
| 1986 |
Stein DB, Palmer JD, Thompson WF. Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda Current Genetics. 10: 835-841. DOI: 10.1007/Bf00418530 |
0.477 |
|
| 1986 |
Palmer JD, Stein DB. Conservation of chloroplast genome structure among vascular plants Current Genetics. 10: 823-833. DOI: 10.1007/Bf00418529 |
0.531 |
|
| 1985 |
Palmer JD. Comparative organization of chloroplast genomes. Annual Review of Genetics. 19: 325-354. PMID 3936406 DOI: 10.1146/Annurev.Ge.19.120185.001545 |
0.375 |
|
| 1985 |
Palmer JD. Chloroplast DNA and molecular phylogeny Bioessays. 2: 263-267. DOI: 10.1002/Bies.950020607 |
0.477 |
|
| 1984 |
Stern DB, Palmer JD. Recombination sequences in plant mitochondrial genomes: diversity and homologies to known mitochondrial genes Nucleic Acids Research. 12: 6141-6157. PMID 6473104 DOI: 10.1093/Nar/12.15.6141 |
0.613 |
|
| 1984 |
Palmer JD, Shields CR. Tripartite structure of the Brassica campestris mitochondrial genome Nature. 307: 437-440. DOI: 10.1038/307437A0 |
0.47 |
|
| 1983 |
Thompson WF, Everett M, Polans NO, Jorgensen RA, Palmer JD. Phytochrome control of RNA levels in developing pea and mung-bean leaves. Planta. 158: 487-500. PMID 24264922 DOI: 10.1007/Bf00397240 |
0.356 |
|
| 1983 |
Palmer JD, Shields CR, Cohen DB, Orton TJ. Chloroplast DNA evolution and the origin of amphidiploid Brassica species. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 65: 181-9. PMID 24263412 DOI: 10.1007/Bf00308062 |
0.376 |
|
| 1983 |
Palmer JD, Shields CR, Cohen DB, Orton TJ. An unusual mitochondrial DNA plasmid in the genus Brassica Nature. 301: 725-728. DOI: 10.1038/301725A0 |
0.503 |
|
| 1983 |
Palmer JD. Chloroplast DNA exists in two orientations Nature. 301: 92-93. DOI: 10.1038/301092A0 |
0.452 |
|
| 1983 |
Palmer JD, Singh GP, Pillay DTN. Structure and sequence evolution of three legume chloroplast DNAs Molecular Genetics and Genomics. 190: 13-19. DOI: 10.1007/Bf00330318 |
0.438 |
|
| 1982 |
Palmer JD, Stein DB. Chloroplast DNA from the fern Osmunda cinnamomea: physical organization, gene localization and comparison to angiosperm. Current Genetics. 5: 165-170. PMID 24186290 DOI: 10.1007/Bf00391801 |
0.498 |
|
| 1982 |
Palmer JD, Zamir D. Chloroplast DNA evolution and phylogenetic relationships in Lycopersicon. Proceedings of the National Academy of Sciences of the United States of America. 79: 5006-5010. PMID 16593219 DOI: 10.1073/Pnas.79.16.5006 |
0.386 |
|
| 1982 |
Palmer JD, Edwards H, Jorgensen RA, Thompson WF. Novel evolutionary variation in transcription and location of two chloroplast genes. Nucleic Acids Research. 10: 6819-32. PMID 6757868 DOI: 10.1093/Nar/10.21.6819 |
0.481 |
|
| 1982 |
Palmer JD, Thompson WF. Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost. Cell. 29: 537-50. PMID 6288261 DOI: 10.1016/0092-8674(82)90170-2 |
0.489 |
|
| 1982 |
Palmer JD. Physical and gene mapping of chloroplast DNA from Atriplex triangularis and Cucumis sativa Nucleic Acids Research. 10: 1593-1605. PMID 6280152 DOI: 10.1093/Nar/10.5.1593 |
0.459 |
|
| 1981 |
Palmer JD, Thompson WF. Rearrangements in the chloroplast genomes of mung bean and pea. Proceedings of the National Academy of Sciences of the United States of America. 78: 5533-7. PMID 16593087 DOI: 10.1073/Pnas.78.9.5533 |
0.533 |
|
| 1981 |
Palmer JD, Thompson WF. Clone banks of the mung bean, pea and spinach chloroplast genomes. Gene. 15: 21-6. PMID 6271631 DOI: 10.1016/0378-1119(81)90100-1 |
0.305 |
|
| 1979 |
Murray MG, Palmer JD, Cuellar RE, Thompson WF. Deoxyribonucleic acid sequence organization in the mung bean genome. Biochemistry. 18: 5259-66. PMID 497181 DOI: 10.1021/Bi00590A034 |
0.388 |
|
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