| Year |
Citation |
Score |
| 2024 |
Sher AW, Aufrecht JA, Herrera D, Zimmerman AE, Kim YM, Munoz N, Trejo JB, Paurus VL, Cliff JB, Hu D, Chrisler WB, Tournay RJ, Gomez-Rivas E, Orr G, Ahkami AH, ... Doty SL, et al. Dynamic nitrogen fixation in an aerobic endophyte of Populus. The Isme Journal. 18. PMID 38365250 DOI: 10.1093/ismejo/wrad012 |
0.378 |
|
| 2023 |
Parasurama S, Banan D, Yun K, Doty S, Kim SH. Bridging Time-series Image Phenotyping and Functional-Structural Plant Modeling to Predict Adventitious Root System Architecture. Plant Phenomics (Washington, D.C.). 5: 0127. PMID 38143722 DOI: 10.34133/plantphenomics.0127 |
0.346 |
|
| 2023 |
Tournay RJ, Firrincieli A, Parikh SS, Sivitilli DM, Doty SL. Effect of Arsenic on EPS Synthesis, Biofilm Formation, and Plant Growth-Promoting Abilities of the Endophytes PD9R and PD12R. Environmental Science & Technology. 57: 8728-8738. PMID 37256822 DOI: 10.1021/acs.est.2c08586 |
0.496 |
|
| 2022 |
Doty SL, Joubert PM, Firrincieli A, Sher AW, Tournay R, Kill C, Parikh SS, Okubara P. Potential Biocontrol Activities of Endophytes against Several Plant Pathogens Using Different Inhibitory Mechanisms. Pathogens (Basel, Switzerland). 12. PMID 36678361 DOI: 10.3390/pathogens12010013 |
0.479 |
|
| 2020 |
Varga T, Hixson KK, Ahkami AH, Sher AW, Barnes ME, Chu RK, Battu AK, Nicora CD, Winkler TE, Reno LR, Fakra SC, Antipova O, Parkinson DY, Hall JR, Doty SL. Endophyte-Promoted Phosphorus Solubilization in . Frontiers in Plant Science. 11: 567918. PMID 33193494 DOI: 10.3389/fpls.2020.567918 |
0.587 |
|
| 2020 |
Rho H, Van Epps V, Kim SH, Doty SL. Endophytes Increased Fruit Quality with Higher Soluble Sugar Production in Honeycrisp Apple (). Microorganisms. 8. PMID 32397574 DOI: 10.3390/microorganisms8050699 |
0.583 |
|
| 2020 |
Firrincieli A, Khorasani M, Frank AC, Doty SL. Influences of Climate on Phyllosphere Endophytic Bacterial Communities of Wild Poplar. Frontiers in Plant Science. 11: 203. PMID 32184800 DOI: 10.3389/Fpls.2020.00203 |
0.515 |
|
| 2019 |
Rho H, Doty SL, Kim SH. Endophytes Alleviate the Elevated CO2-dependent Decrease in Photosynthesis in Rice, Particularly under Nitrogen Limitation. Journal of Experimental Botany. PMID 31587073 DOI: 10.1093/Jxb/Erz440 |
0.55 |
|
| 2019 |
Aghai MM, Khan Z, Joseph MR, Stoda AM, Sher AW, Ettl GJ, Doty SL. The Effect of Microbial Endophyte Consortia on and Survival, Growth, and Physiology Across Edaphic Gradients. Frontiers in Microbiology. 10: 1353. PMID 31275276 DOI: 10.3389/Fmicb.2019.01353 |
0.528 |
|
| 2018 |
Kandel SL, Firrincieli A, Joubert PM, Okubara PA, Leston ND, McGeorge KM, Mugnozza GS, Harfouche A, Kim SH, Doty SL. Corrigendum: An Study of Bio-Control and Plant Growth Promotion Potential of Salicaceae Endophytes. Frontiers in Microbiology. 9: 2067. PMID 30224912 DOI: 10.3389/Fmicb.2018.02067 |
0.551 |
|
| 2018 |
Rho H, Doty SL, Kim SH. Estimating microbial respiratory CO from endophytic bacteria in rice. Plant Signaling & Behavior. 1-5. PMID 30081765 DOI: 10.1080/15592324.2018.1500067 |
0.6 |
|
| 2018 |
Doty SL. Symbiotic Plant-Bacterial Endospheric Interactions. Microorganisms. 6. PMID 29565291 DOI: 10.3390/microorganisms6020028 |
0.494 |
|
| 2018 |
Rho H, Van Epps V, Wegley N, Doty SL, Kim SH. Salicaceae Endophytes Modulate Stomatal Behavior and Increase Water Use Efficiency in Rice. Frontiers in Plant Science. 9: 188. PMID 29552021 DOI: 10.3389/Fpls.2018.00188 |
0.526 |
|
| 2017 |
Levy A, Salas Gonzalez I, Mittelviefhaus M, Clingenpeel S, Herrera Paredes S, Miao J, Wang K, Devescovi G, Stillman K, Monteiro F, Rangel Alvarez B, Lundberg DS, Lu TY, Lebeis S, Jin Z, ... ... Doty SL, et al. Genomic features of bacterial adaptation to plants. Nature Genetics. PMID 29255260 DOI: 10.1038/S41588-017-0012-9 |
0.581 |
|
| 2017 |
Kandel SL, Joubert PM, Doty SL. Bacterial Endophyte Colonization and Distribution within Plants. Microorganisms. 5. PMID 29186821 DOI: 10.3390/microorganisms5040077 |
0.583 |
|
| 2017 |
Rho H, Hsieh M, Kandel SL, Cantillo J, Doty SL, Kim SH. Do Endophytes Promote Growth of Host Plants Under Stress? A Meta-Analysis on Plant Stress Mitigation by Endophytes. Microbial Ecology. PMID 28840330 DOI: 10.1007/S00248-017-1054-3 |
0.599 |
|
| 2017 |
Doty SL, Freeman JL, Cohu CM, Burken JG, Firrincieli A, Simon A, Khan Z, Isebrands JG, Lukas J, Blaylock MJ. Enhanced degradation of TCE on a Superfund site using endophyte-assisted poplar tree phytoremediation. Environmental Science & Technology. PMID 28737929 DOI: 10.1021/Acs.Est.7B01504 |
0.492 |
|
| 2017 |
Legault EK, James CA, Stewart K, Muiznieks I, Doty SL, Strand SE. A Field Trial of TCE Phytoremediation by Genetically Modified Poplars Expressing Cytochrome P450 2E1. Environmental Science & Technology. PMID 28463483 DOI: 10.1021/Acs.Est.5B04758 |
0.515 |
|
| 2017 |
Kandel SL, Firrincieli A, Joubert PM, Okubara PA, Leston ND, McGeorge KM, Mugnozza GS, Harfouche A, Kim SH, Doty SL. An In vitro Study of Bio-Control and Plant Growth Promotion Potential of Salicaceae Endophytes. Frontiers in Microbiology. 8: 386. PMID 28348550 DOI: 10.3389/Fmicb.2017.00386 |
0.638 |
|
| 2016 |
Doty SL, Sher AW, Fleck ND, Khorasani M, Bumgarner RE, Khan Z, Ko AW, Kim SH, DeLuca TH. Variable Nitrogen Fixation in Wild Populus. Plos One. 11: e0155979. PMID 27196608 DOI: 10.1371/Journal.Pone.0155979 |
0.459 |
|
| 2016 |
Doty SL. Plant–microbe symbiotic interactions Plant Molecular Biology. 90: 535. PMID 27003906 DOI: 10.1007/S11103-016-0470-Y |
0.608 |
|
| 2016 |
Khan Z, Rho H, Firrincieli A, Hung SH, Luna V, Masciarelli O, Kim S, Doty SL. Growth enhancement and drought tolerance of hybrid poplar upon inoculation with endophyte consortia Current Plant Biology. 6: 38-47. DOI: 10.1016/J.Cpb.2016.08.001 |
0.631 |
|
| 2015 |
Firrincieli A, Otillar R, Salamov A, Schmutz J, Khan Z, Redman RS, Fleck ND, Lindquist E, Grigoriev IV, Doty SL. Genome sequence of the plant growth promoting endophytic yeast Rhodotorula graminis WP1. Frontiers in Microbiology. 6: 978. PMID 26441909 DOI: 10.3389/Fmicb.2015.00978 |
0.426 |
|
| 2015 |
Khan Z, Kandel SL, Ramos DN, Ettl GJ, Kim SH, Doty SL. Increased biomass of nursery-grown douglas-fir seedlings upon inoculation with diazotrophic endophytic consortia Forests. 6: 3582-3593. DOI: 10.3390/F6103582 |
0.671 |
|
| 2015 |
Kandel SL, Herschberger N, Kim SH, Doty SL. Diazotrophic endophytes of poplar and willow for growth promotion of rice plants in nitrogen-limited conditions Crop Science. 55: 1765-1772. DOI: 10.2135/Cropsci2014.08.0570 |
0.648 |
|
| 2015 |
Doty SL. Improving crop growth, biomass production and phytoremediation using endophytes of poplar Australasian Biotechnology. 25: 46. |
0.345 |
|
| 2014 |
Khan Z, Roman D, Kintz T, delas Alas M, Yap R, Doty S. Degradation, phytoprotection and phytoremediation of phenanthrene by endophyte Pseudomonas putida, PD1. Environmental Science & Technology. 48: 12221-8. PMID 25275224 DOI: 10.1021/Es503880T |
0.554 |
|
| 2014 |
Kang JW, Doty SL. Cometabolic degradation of trichloroethylene by Burkholderia cepacia G4 with poplar leaf homogenate. Canadian Journal of Microbiology. 60: 487-90. PMID 24992516 DOI: 10.1139/Cjm-2014-0095 |
0.361 |
|
| 2014 |
Knoth JL, Kim SH, Ettl GJ, Doty SL. Biological nitrogen fixation and biomass accumulation within poplar clones as a result of inoculations with diazotrophic endophyte consortia. The New Phytologist. 201: 599-609. PMID 24117518 DOI: 10.1111/Nph.12536 |
0.687 |
|
| 2013 |
Kang JW, Song J, Doty SL, Lee DK. Diversity of rhizobia associated with leguminous trees growing in South Korea. Journal of Basic Microbiology. 53: 291-8. PMID 22733456 DOI: 10.1002/Jobm.201100504 |
0.364 |
|
| 2013 |
Knoth JL, Kim SH, Ettl GJ, Doty SL. Effects of cross host species inoculation of nitrogen-fixing endophytes on growth and leaf physiology of maize Gcb Bioenergy. 5: 408-418. DOI: 10.1111/Gcbb.12006 |
0.696 |
|
| 2012 |
Vajzovic A, Bura R, Kohlmeier K, Doty SL. Novel endophytic yeast Rhodotorula mucilaginosa strain PTD3 II: production of xylitol and ethanol in the presence of inhibitors. Journal of Industrial Microbiology & Biotechnology. 39: 1453-63. PMID 22711018 DOI: 10.1007/S10295-012-1154-5 |
0.308 |
|
| 2012 |
Lee KY, Strand SE, Doty SL. Phytoremediation of chlorpyrifos by Populus and Salix. International Journal of Phytoremediation. 14: 48-61. PMID 22567694 DOI: 10.1080/15226514.2011.560213 |
0.719 |
|
| 2012 |
Bura R, Vajzovic A, Doty SL. Novel endophytic yeast Rhodotorula mucilaginosa strain PTD3 I: production of xylitol and ethanol. Journal of Industrial Microbiology & Biotechnology. 39: 1003-11. PMID 22399239 DOI: 10.1007/S10295-012-1109-X |
0.3 |
|
| 2012 |
Kang JW, Khan Z, Doty SL. Biodegradation of trichloroethylene by an endophyte of hybrid poplar. Applied and Environmental Microbiology. 78: 3504-7. PMID 22367087 DOI: 10.1128/Aem.06852-11 |
0.326 |
|
| 2012 |
Khan Z, Guelich G, Phan H, Redman R, Doty S. Bacterial and Yeast Endophytes from Poplar and Willow Promote Growth in Crop Plants and Grasses Isrn Agronomy. 2012: 1-11. DOI: 10.5402/2012/890280 |
0.688 |
|
| 2011 |
Xu P, Bura R, Doty SL. Genetic analysis of D-xylose metabolism by endophytic yeast strains of Rhodotorula graminis and Rhodotorula mucilaginosa. Genetics and Molecular Biology. 34: 471-8. PMID 21931522 DOI: 10.1590/S1415-47572011000300018 |
0.406 |
|
| 2011 |
Redman RS, Kim YO, Woodward CJ, Greer C, Espino L, Doty SL, Rodriguez RJ. Increased fitness of rice plants to abiotic stress via habitat adapted symbiosis: a strategy for mitigating impacts of climate change. Plos One. 6: e14823. PMID 21750695 DOI: 10.1371/Journal.Pone.0014823 |
0.593 |
|
| 2011 |
Khan Z, Doty SL. Comparison of Trichloroethylene Toxicity, Removal, and Degradation by Varieties of Populus and Salix for Improved Phytoremediation Journal of Bioremediation and Biodegradation. 2013: 1-9. DOI: 10.4172/2155-6199.S7-001 |
0.407 |
|
| 2010 |
Van Aken B, Doty SL. Transgenic plants and associated bacteria for phytoremediation of chlorinated compounds. Biotechnology & Genetic Engineering Reviews. 26: 43-64. PMID 21415875 DOI: 10.5661/Bger-26-43 |
0.591 |
|
| 2010 |
Kang JW, Wilkerson HW, Farin FM, Bammler TK, Beyer RP, Strand SE, Doty SL. Mammalian cytochrome CYP2E1 triggered differential gene regulation in response to trichloroethylene (TCE) in a transgenic poplar. Functional & Integrative Genomics. 10: 417-24. PMID 20213342 DOI: 10.1007/S10142-010-0165-4 |
0.505 |
|
| 2009 |
Xin G, Glawe D, Doty SL. Characterization of three endophytic, indole-3-acetic acid-producing yeasts occurring in Populus trees. Mycological Research. 113: 973-80. PMID 19539760 DOI: 10.1016/J.Mycres.2009.06.001 |
0.616 |
|
| 2009 |
Dowling DN, Doty SL. Improving phytoremediation through biotechnology. Current Opinion in Biotechnology. 20: 204-6. PMID 19361978 DOI: 10.1016/J.Copbio.2009.03.007 |
0.608 |
|
| 2009 |
James CA, Xin G, Doty SL, Muiznieks I, Newman L, Strand SE. A mass balance study of the phytoremediation of perchloroethylene-contaminated groundwater. Environmental Pollution (Barking, Essex : 1987). 157: 2564-9. PMID 19345455 DOI: 10.1016/J.Envpol.2009.02.033 |
0.51 |
|
| 2009 |
Khan Z, Doty SL. Characterization of bacterial endophytes of sweet potato plants Plant and Soil. 322: 197-207. DOI: 10.1007/S11104-009-9908-1 |
0.622 |
|
| 2009 |
Xin G, Zhang G, Kang JW, Staley JT, Doty SL. A diazotrophic, indole-3-acetic acid-producing endophyte from wild cottonwood Biology and Fertility of Soils. 45: 669-674. DOI: 10.1007/S00374-009-0377-8 |
0.723 |
|
| 2009 |
Doty SL, Oakley B, Xin G, Kang JW, Singleton G, Khan Z, Vajzovic A, Staley JT. Diazotrophic endophytes of native black cottonwood and willow Symbiosis. 47: 23-33. DOI: 10.1007/Bf03179967 |
0.6 |
|
| 2008 |
Doty SL. Enhancing phytoremediation through the use of transgenics and endophytes New Phytologist. 179: 318-333. PMID 19086174 DOI: 10.1111/J.1469-8137.2008.02446.X |
0.604 |
|
| 2008 |
James CA, Xin G, Doty SL, Strand SE. Degradation of low molecular weight volatile organic compounds by plants genetically modified with mammalian cytochrome P450 2E1. Environmental Science & Technology. 42: 289-93. PMID 18350910 DOI: 10.1021/Es071197Z |
0.594 |
|
| 2007 |
Doty SL, James CA, Moore AL, Vajzovic A, Singleton GL, Ma C, Khan Z, Xin G, Kang JW, Park JY, Meilan R, Strauss SH, Wilkerson J, Farin F, Strand SE. Enhanced phytoremediation of volatile environmental pollutants with transgenic trees. Proceedings of the National Academy of Sciences of the United States of America. 104: 16816-21. PMID 17940038 DOI: 10.1073/Pnas.0703276104 |
0.658 |
|
| 2005 |
Doty SL, Dosher MR, Singleton GL, Moore AL, Van Aken B, Stettler RF, Strand SE, Gordon MP. Identification of an endophytic Rhizobium in stems of Populus Symbiosis. 39: 27-35. |
0.308 |
|
| 2004 |
Van Aken B, Peres CM, Doty SL, Yoon JM, Schnoor JL. Methylobacterium populi sp. nov., a novel aerobic, pink-pigmented, facultatively methylotrophic, methane-utilizing bacterium isolated from poplar trees (Populus deltoides x nigra DN34). International Journal of Systematic and Evolutionary Microbiology. 54: 1191-6. PMID 15280290 DOI: 10.1099/Ijs.0.02796-0 |
0.37 |
|
| 2003 |
Doty SL, Shang TQ, Wilson AM, Moore AL, Newman LA, Strand SE, Gordon MP. Metabolism of the soil and groundwater contaminants, ethylene dibromide and trichloroethylene, by the tropical leguminous tree, Leuceana leucocephala. Water Research. 37: 441-9. PMID 12502073 DOI: 10.1016/S0043-1354(02)00291-9 |
0.578 |
|
| 2001 |
Shang TQ, Doty SL, Wilson AM, Howald WN, Gordon MP. Trichloroethylene oxidative metabolism in plants: the trichloroethanol pathway. Phytochemistry. 58: 1055-65. PMID 11730869 DOI: 10.1016/S0031-9422(01)00369-7 |
0.567 |
|
| 2000 |
Doty SL, Shang TQ, Wilson AM, Tangen J, Westergreen AD, Newman LA, Strand SE, Gordon MP. Enhanced metabolism of halogenated hydrocarbons in transgenic plants containing mammalian cytochrome P450 2E1. Proceedings of the National Academy of Sciences of the United States of America. 97: 6287-91. PMID 10841534 DOI: 10.1073/Pnas.97.12.6287 |
0.596 |
|
| 1998 |
Newman LA, Doty SL, Gery KL, Heilman PE, Muiznieks I, Shang TQ, Siemieniec ST, Strand SE, Wang X, Wilson AM, Gordon MP. Phytoremediation of Organic Contaminants: A Review of Phytoremediation Research at the University of Washington Journal of Soil Contamination. 7: 531-542. DOI: 10.1080/10588339891334366 |
0.578 |
|
| 1998 |
Newman LA, Doty SL, Gery KL, Heilman PE, Muiznieks I, Shang TQ, Siemieniec ST, Strand SE, Wang X, Wilson AM, Gordon MP. Phytoremediation of organic contaminants: A review of phytoremediation research at the University of Washington Soil and Sediment Contamination. 7: 531-542. |
0.54 |
|
| 1997 |
Heath JD, Boulton MI, Raineri DM, Doty SL, Mushegian AR, Charles TC, Davies JW, Nester EW. Discrete regions of the sensor protein virA determine the strain-specific ability of Agrobacterium to agroinfect maize. Molecular Plant-Microbe Interactions : Mpmi. 10: 221-7. PMID 9057328 DOI: 10.1094/Mpmi.1997.10.2.221 |
0.369 |
|
| 1993 |
Doty SL, Chang M, Nester EW. The chromosomal virulence gene, chvE, of Agrobacterium tumefaciens is regulated by a LysR family member Journal of Bacteriology. 175: 7880-7886. PMID 8253677 DOI: 10.1128/Jb.175.24.7880-7886.1993 |
0.309 |
|
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