| Year |
Citation |
Score |
| 2022 |
Rosenberg NA, Boni MF. Mathematical epidemiology for a later age. Theoretical Population Biology. 144: 81-83. PMID 35247319 DOI: 10.1016/j.tpb.2022.02.004 |
0.401 |
|
| 2020 |
Delabouglise A, Thanh NTL, Xuyen HTA, Nguyen-Van-Yen B, Tuyet PN, Lam HM, Boni MF. Poultry farmer response to disease outbreaks in smallholder farming systems in southern Vietnam. Elife. 9. PMID 32840482 DOI: 10.7554/Elife.59212 |
0.384 |
|
| 2020 |
Boni MF, Lemey P, Jiang X, Lam TT, Perry BW, Castoe TA, Rambaut A, Robertson DL. Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic. Nature Microbiology. PMID 32724171 DOI: 10.1038/S41564-020-0771-4 |
0.354 |
|
| 2020 |
Pollock DD, Castoe TA, Perry BW, Lytras S, Wade KJ, Robertson DL, Holmes EC, Boni MF, Kosakovsky Pond SL, Parry R, Carlton EJ, Wood JLN, Pennings PS, Goldstein RA. Viral CpG deficiency provides no evidence that dogs were intermediate hosts for SARS-CoV-2. Molecular Biology and Evolution. PMID 32658964 DOI: 10.1093/Molbev/Msaa178 |
0.35 |
|
| 2020 |
Bryant JE, Azman AS, Ferrari MJ, Arnold BF, Boni MF, Boum Y, Hayford K, Luquero FJ, Mina MJ, Rodriguez-Barraquer I, Wu JT, Wade D, Vernet G, Leung DT. Serology for SARS-CoV-2: Apprehensions, opportunities, and the path forward. Science Immunology. 5. PMID 32430309 DOI: 10.1126/Sciimmunol.Abc6347 |
0.3 |
|
| 2020 |
Thao TTN, de Bruin E, Phuong HT, Thao Vy NH, van den Ham HJ, Wills BA, Tien NTH, Le Duyen HT, Trung DT, Whitehead SS, Boni MF, Koopmans M, Clapham HE. Using NS1 flavivirus protein microarray to infer past infecting dengue virus serotype and number of past dengue virus infections in Vietnamese individuals. The Journal of Infectious Diseases. PMID 31967302 DOI: 10.1093/Infdis/Jiaa018 |
0.329 |
|
| 2019 |
Delabouglise A, Boni MF. Game theory of vaccination and depopulation for managing livestock diseases and zoonoses on small-scale farms. Epidemics. 100370. PMID 31587878 DOI: 10.1016/J.Epidem.2019.100370 |
0.36 |
|
| 2019 |
Lam HM, Phuong HT, Thao Vy NH, Le Thanh NT, Dung PN, Ngoc Muon TT, Van Vinh Chau N, Rodríguez-Barraquer I, Cummings DAT, Wills BA, Boni MF, Rabaa MA, Clapham HE. Serological inference of past primary and secondary dengue infection: implications for vaccination. Journal of the Royal Society, Interface. 16: 20190207. PMID 31362614 DOI: 10.1098/Rsif.2019.0207 |
0.332 |
|
| 2019 |
Delabouglise A, Nguyen-Van-Yen B, Thanh NTL, Xuyen HTA, Tuyet PN, Lam HM, Boni MF. Poultry population dynamics and mortality risks in smallholder farms of the Mekong river delta region. Bmc Veterinary Research. 15: 205. PMID 31208467 DOI: 10.1186/S12917-019-1949-Y |
0.383 |
|
| 2019 |
Choisy M, Trinh ST, Nguyen TND, Nguyen TH, Mai QL, Pham QT, Tran ND, Dang DA, Horby PW, Boni MF, Bryant J, Lewycka SO, Nadjm B, Van Doorn HR, Wertheim HFL. Sero-Prevalence Surveillance to Predict Vaccine-Preventable Disease Outbreaks; A Lesson from the 2014 Measles Epidemic in Northern Vietnam. Open Forum Infectious Diseases. 6: ofz030. PMID 30863786 DOI: 10.1093/Ofid/Ofz030 |
0.329 |
|
| 2018 |
Thanh LT, Phan TH, Rattanavong S, Nguyen TM, Duong AV, Dacon C, Hoang TN, Nguyen LPH, Tran CTH, Davong V, Nguyen CVV, Thwaites GE, Boni MF, Dance D, Ashton PM, et al. Multilocus sequence typing of Cryptococcus neoformans var. grubii from Laos in a regional and global context. Medical Mycology. PMID 30339200 DOI: 10.1093/Mmy/Myy105 |
0.339 |
|
| 2018 |
Lam HM, Wesolowski A, Hung NT, Nguyen TD, Nhat NTD, Todd S, Vinh DN, Vy NHT, Thao TTN, Thanh NTL, Tin PT, Minh NNQ, Bryant JE, Buckee CO, Ngoc TV, ... ... Boni MF, et al. Non-annual seasonality of influenza-like illness in a tropical urban setting. Influenza and Other Respiratory Viruses. PMID 30044029 DOI: 10.1111/Irv.12595 |
0.329 |
|
| 2018 |
Todd S, Huong NTC, Thanh NTL, Vy NHT, Hung NT, Thao TTN, Phuong HT, van Doorn HR, Hang VTT, Chau NVV, Read JM, Lalloo DG, Boni MF. Primary Care Influenza-like Illness Surveillance in Ho Chi Minh City, Vietnam 2013-2015. Influenza and Other Respiratory Viruses. PMID 29858879 DOI: 10.1111/Irv.12574 |
0.366 |
|
| 2018 |
Quan TM, Phuong HT, Vy NHT, Thanh NTL, Lien NTN, Hong TTK, Dung PN, Chau NVV, Boni MF, Clapham HE. Evidence of previous but not current transmission of chikungunya virus in southern and central Vietnam: Results from a systematic review and a seroprevalence study in four locations. Plos Neglected Tropical Diseases. 12: e0006246. PMID 29425199 DOI: 10.1371/Journal.Pntd.0006246 |
0.368 |
|
| 2017 |
Tun STT, von Seidlein L, Pongvongsa T, Mayxay M, Saralamba S, Kyaw SS, Chanthavilay P, Celhay O, Nguyen TD, Tran TN, Parker DM, Boni MF, Dondorp AM, White LJ. Towards malaria elimination in Savannakhet, Lao PDR: mathematical modelling driven strategy design. Malaria Journal. 16: 483. PMID 29183370 DOI: 10.1186/S12936-017-2130-3 |
0.301 |
|
| 2017 |
Vy NHT, Phuong HT, Vinh DN, Boni MF. A8 The epidemiology and evolution of influenza A/H1N1 and A/H3N2 virus from 2010 to 2015, in Ho Chi Minh City, Vietnam. Virus Evolution. 3. PMID 28845267 DOI: 10.1093/Ve/Vew036.007 |
0.363 |
|
| 2017 |
Thanh NTL, Vy NHT, Xuyen HTA, Phuong HT, Tuyet PN, Huy NT, Nguyen-Van-Yen B, Lam HM, Boni MF. No Evidence of On-farm Circulation of Avian Influenza H5 Subtype in Ca Mau Province, Southern Vietnam, March 2016 - January 2017. Plos Currents. 9. PMID 28736677 DOI: 10.1371/Currents.Outbreaks.C816D7333370D68F8A0Da33F69168986 |
0.385 |
|
| 2017 |
Nhat NTD, Todd S, de Bruin E, Thao TTN, Vy NHT, Quan TM, Vinh DN, van Beek J, Anh PH, Lam HM, Hung NT, Thanh NTL, Huy HLA, Ha VTH, Baker S, ... ... Boni MF, et al. Structure of general-population antibody titer distributions to influenza A virus. Scientific Reports. 7: 6060. PMID 28729702 DOI: 10.1038/S41598-017-06177-0 |
0.402 |
|
| 2017 |
Day JN, Qihui S, Thanh LT, Trieu PH, Van AD, Thu NH, Chau TTH, Lan NPH, Chau NVV, Ashton PM, Thwaites GE, Boni MF, Wolbers M, Nagarajan N, Tan PBO, et al. Comparative genomics of Cryptococcus neoformans var. grubii associated with meningitis in HIV infected and uninfected patients in Vietnam. Plos Neglected Tropical Diseases. 11: e0005628. PMID 28614360 DOI: 10.1371/Journal.Pntd.0005628 |
0.307 |
|
| 2017 |
Berto A, Pham HA, Thao TTN, Vy NHT, Caddy SL, Hiraide R, Tue NT, Goodfellow I, Carrique-Mas JJ, Thwaites GE, Baker S, Boni MF. Hepatitis E in southern Vietnam: Seroepidemiology in humans and molecular epidemiology in pigs. Zoonoses and Public Health. PMID 28598034 DOI: 10.1111/Zph.12364 |
0.352 |
|
| 2017 |
Boni MF. Zika: The Emerging Epidemic Emerging Infectious Diseases. 23: 1762-1762. DOI: 10.3201/Eid2310.171139 |
0.304 |
|
| 2016 |
Pearson RD, Amato R, Auburn S, Miotto O, Almagro-Garcia J, Amaratunga C, Suon S, Mao S, Noviyanti R, Trimarsanto H, Marfurt J, Anstey NM, William T, Boni MF, Dolecek C, et al. Genomic analysis of local variation and recent evolution in Plasmodium vivax. Nature Genetics. PMID 27348299 DOI: 10.1038/Ng.3599 |
0.361 |
|
| 2016 |
Wollacott AM, Boni MF, Szretter KJ, Sloan SE, Yousofshahi M, Viswanathan K, Bedard S, Hay CA, Smith PF, Shriver Z, Trevejo JM. Safety and Upper Respiratory Pharmacokinetics of the Hemagglutinin Stalk-Binding Antibody VIS410 Support Treatment and Prophylaxis Based on Population Modeling of Seasonal Influenza A Outbreaks. Ebiomedicine. 5: 147-55. PMID 27077121 DOI: 10.1016/J.Ebiom.2016.02.021 |
0.382 |
|
| 2016 |
Freidl GS, van den Ham HJ, Boni MF, de Bruin E, Koopmans MP. Changes in heterosubtypic antibody responses during the first year of the 2009 A(H1N1) influenza pandemic. Scientific Reports. 6: 20385. PMID 26853924 DOI: 10.1038/Srep20385 |
0.388 |
|
| 2016 |
Cuong NV, Truc VN, Nhung NT, Thanh TT, Chieu TT, Hieu TQ, Men NT, Mai HH, Chi HT, Boni MF, van Doorn HR, Thwaites GE, Carrique-Mas JJ, Hoa NT. Highly Pathogenic Avian Influenza Virus A/H5N1 Infection in Vaccinated Meat Duck Flocks in the Mekong Delta of Vietnam. Transboundary and Emerging Diseases. PMID 26748550 DOI: 10.1111/Tbed.12470 |
0.368 |
|
| 2016 |
Lycett SJ, Bodewes R, Pohlmann A, Banks J, Bányai K, Boni MF, Bouwstra R, Breed AC, Brown IH, Chen H, Dán Á, DeLiberto TJ, Diep N, Gilbert M, Hill S, et al. Role for migratory wild birds in the global spread of avian influenza H5N8 Science. 354: 213-217. DOI: 10.1126/Science.Aaf8852 |
0.405 |
|
| 2015 |
Thai PQ, Choisy M, Duong TN, Thiem VD, Yen NT, Hien NT, Weiss DJ, Boni MF, Horby P. Seasonality of absolute humidity explains seasonality of influenza-like illness in Vietnam. Epidemics. 13: 65-73. PMID 26616043 DOI: 10.1016/J.Epidem.2015.06.002 |
0.4 |
|
| 2015 |
Rabaa MA, Tue NT, Phuc TM, Carrique-Mas J, Saylors K, Cotten M, Bryant JE, Nghia HD, Cuong NV, Pham HA, Berto A, Phat VV, Dung TT, Bao LH, Hoa NT, ... ... Boni MF, et al. The Vietnam Initiative on Zoonotic Infections (VIZIONS): A Strategic Approach to Studying Emerging Zoonotic Infectious Diseases. Ecohealth. PMID 26403795 DOI: 10.1007/S10393-015-1061-0 |
0.365 |
|
| 2015 |
Wesolowski A, Qureshi T, Boni MF, Sundsøy PR, Johansson MA, Rasheed SB, Engø-Monsen K, Buckee CO. Impact of human mobility on the emergence of dengue epidemics in Pakistan. Proceedings of the National Academy of Sciences of the United States of America. 112: 11887-92. PMID 26351662 DOI: 10.1073/Pnas.1504964112 |
0.399 |
|
| 2015 |
Vinh DN, Boni MF. Statistical identifiability and sample size calculations for serial seroepidemiology. Epidemics. 12: 30-9. PMID 26342240 DOI: 10.1016/J.Epidem.2015.02.005 |
0.356 |
|
| 2015 |
Peak CM, Thuan PD, Britton A, Nguyen TD, Wolbers M, Thanh NV, Buckee CO, Boni MF. Measuring the association between artemisinin-based case management and malaria incidence in southern Vietnam, 1991-2010. The American Journal of Tropical Medicine and Hygiene. 92: 811-7. PMID 25667053 DOI: 10.4269/Ajtmh.14-0461 |
0.315 |
|
| 2014 |
Eden JS, Hewitt J, Lim KL, Boni MF, Merif J, Greening G, Ratcliff RM, Holmes EC, Tanaka MM, Rawlinson WD, White PA. The emergence and evolution of the novel epidemic norovirus GII.4 variant Sydney 2012. Virology. 450: 106-13. PMID 24503072 DOI: 10.1016/J.Virol.2013.12.005 |
0.538 |
|
| 2014 |
Todd S, De Bruin E, Nhat NT, Koopmans M, Boni MF. Reply to Pawar et al. The Journal of Infectious Diseases. 210: 161-3. PMID 24453262 DOI: 10.1093/Infdis/Jiu034 |
0.386 |
|
| 2014 |
Rasmussen DA, Boni MF, Koelle K. Reconciling phylodynamics with epidemiology: the case of dengue virus in southern Vietnam. Molecular Biology and Evolution. 31: 258-71. PMID 24150038 DOI: 10.1093/Molbev/Mst203 |
0.361 |
|
| 2013 |
Le MQ, Lam HM, Cuong VD, Lam TT, Halpin RA, Wentworth DE, Hien NT, Thanh le T, Phuong HV, Horby P, Boni MF. Migration and persistence of human influenza A viruses, Vietnam, 2001-2008. Emerging Infectious Diseases. 19: 1756-65. PMID 24188643 DOI: 10.3201/Eid1911.130349 |
0.417 |
|
| 2013 |
Boni MF, Galvani AP, Wickelgren AL, Malani A. Economic epidemiology of avian influenza on smallholder poultry farms. Theoretical Population Biology. 90: 135-44. PMID 24161559 DOI: 10.1016/J.Tpb.2013.10.001 |
0.635 |
|
| 2013 |
Tan le V, van Doorn HR, Nghia HD, Chau TT, Tu le TP, de Vries M, Canuti M, Deijs M, Jebbink MF, Baker S, Bryant JE, Tham NT, BKrong NT, Boni MF, Loi TQ, et al. Identification of a new cyclovirus in cerebrospinal fluid of patients with acute central nervous system infections. Mbio. 4: e00231-13. PMID 23781068 DOI: 10.1128/Mbio.00231-13 |
0.307 |
|
| 2013 |
Cuong HQ, Vu NT, Cazelles B, Boni MF, Thai KT, Rabaa MA, Quang LC, Simmons CP, Huu TN, Anders KL. Spatiotemporal dynamics of dengue epidemics, southern Vietnam. Emerging Infectious Diseases. 19: 945-53. PMID 23735713 DOI: 10.3201/Eid1906.121323 |
0.38 |
|
| 2013 |
Boni MF, Chau NV, Dong N, Todd S, Nhat NT, de Bruin E, van Beek J, Hien NT, Simmons CP, Farrar J, Koopmans M. Population-level antibody estimates to novel influenza A/H7N9. The Journal of Infectious Diseases. 208: 554-8. PMID 23687225 DOI: 10.1093/Infdis/Jit224 |
0.383 |
|
| 2013 |
Miotto O, Almagro-Garcia J, Manske M, Macinnis B, Campino S, Rockett KA, Amaratunga C, Lim P, Suon S, Sreng S, Anderson JM, Duong S, Nguon C, Chuor CM, Saunders D, ... ... Boni MF, et al. Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia. Nature Genetics. 45: 648-55. PMID 23624527 DOI: 10.1038/Ng.2624 |
0.311 |
|
| 2013 |
Eden JS, Tanaka MM, Boni MF, Rawlinson WD, White PA. Recombination within the pandemic norovirus GII.4 lineage. Journal of Virology. 87: 6270-82. PMID 23536665 DOI: 10.1128/Jvi.03464-12 |
0.531 |
|
| 2013 |
Boni MF, Nguyen TD, de Jong MD, van Doorn HR. Virulence attenuation during an influenza A/H5N1 pandemic. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20120207. PMID 23382429 DOI: 10.1098/Rstb.2012.0207 |
0.429 |
|
| 2012 |
Hien TT, Thuy-Nhien NT, Phu NH, Boni MF, Thanh NV, Nha-Ca NT, Thai le H, Thai CQ, Toi PV, Thuan PD, Long le T, Dong le T, Merson L, Dolecek C, Stepniewska K, et al. In vivo susceptibility of Plasmodium falciparum to artesunate in Binh Phuoc Province, Vietnam. Malaria Journal. 11: 355. PMID 23101492 DOI: 10.1186/1475-2875-11-355 |
0.308 |
|
| 2012 |
Boni MF, Smith GJ, Holmes EC, Vijaykrishna D. No evidence for intra-segment recombination of 2009 H1N1 influenza virus in swine. Gene. 494: 242-5. PMID 22226809 DOI: 10.1016/J.Gene.2011.10.041 |
0.383 |
|
| 2011 |
Baker S, Holt KE, Clements AC, Karkey A, Arjyal A, Boni MF, Dongol S, Hammond N, Koirala S, Duy PT, Nga TV, Campbell JI, Dolecek C, Basnyat B, Dougan G, et al. Combined high-resolution genotyping and geospatial analysis reveals modes of endemic urban typhoid fever transmission. Open Biology. 1: 110008. PMID 22645647 DOI: 10.1098/Rsob.110008 |
0.338 |
|
| 2011 |
Long NT, Thanh TT, van Doorn HR, Vu PP, Dung PT, Dung TT, Tien TN, Thao DT, Hung P, Quang NV, Hoa NT, Bryant JE, Boni MF. Recent avian influenza virus A/H5N1 evolution in vaccinated and unvaccinated poultry from farms in Southern Vietnam, January-March 2010. Transboundary and Emerging Diseases. 58: 537-43. PMID 21586098 DOI: 10.1111/J.1865-1682.2011.01229.X |
0.399 |
|
| 2010 |
Karkey A, Arjyal A, Anders KL, Boni MF, Dongol S, Koirala S, My PV, Nga TV, Clements AC, Holt KE, Duy PT, Day JN, Campbell JI, Dougan G, Dolecek C, et al. The burden and characteristics of enteric fever at a healthcare facility in a densely populated area of Kathmandu. Plos One. 5: e13988. PMID 21085575 DOI: 10.1371/Journal.Pone.0013988 |
0.359 |
|
| 2010 |
Han GZ, Boni MF, Li SS. No observed effect of homologous recombination on influenza C virus evolution. Virology Journal. 7: 227. PMID 20840780 DOI: 10.1186/1743-422X-7-227 |
0.384 |
|
| 2010 |
Thai KT, Cazelles B, Nguyen NV, Vo LT, Boni MF, Farrar J, Simmons CP, van Doorn HR, de Vries PJ. Dengue dynamics in Binh Thuan province, southern Vietnam: periodicity, synchronicity and climate variability. Plos Neglected Tropical Diseases. 4: e747. PMID 20644621 DOI: 10.1371/Journal.Pntd.0000747 |
0.334 |
|
| 2010 |
Hien TT, Boni MF, Bryant JE, Ngan TT, Wolbers M, Nguyen TD, Truong NT, Dung NT, Ha do Q, Hien VM, Thanh TT, Nhu le NT, Uyen le TT, Nhien PT, Chinh NT, et al. Early pandemic influenza (2009 H1N1) in Ho Chi Minh City, Vietnam: a clinical virological and epidemiological analysis. Plos Medicine. 7: e1000277. PMID 20502525 DOI: 10.1371/Journal.Pmed.1000277 |
0.41 |
|
| 2010 |
Boni MF, de Jong MD, van Doorn HR, Holmes EC. Guidelines for identifying homologous recombination events in influenza A virus. Plos One. 5: e10434. PMID 20454662 DOI: 10.1371/Journal.Pone.0010434 |
0.394 |
|
| 2009 |
Vinh H, Nhu NT, Nga TV, Duy PT, Campbell JI, Hoang NV, Boni MF, My PV, Parry C, Nga TT, Van Minh P, Thuy CT, Diep TS, Phuong le T, Chinh MT, et al. A changing picture of shigellosis in southern Vietnam: shifting species dominance, antimicrobial susceptibility and clinical presentation. Bmc Infectious Diseases. 9: 204. PMID 20003464 DOI: 10.1186/1471-2334-9-204 |
0.308 |
|
| 2009 |
Boni MF, Manh BH, Thai PQ, Farrar J, Hien TT, Hien NT, Van Kinh N, Horby P. Modelling the progression of pandemic influenza A (H1N1) in Vietnam and the opportunities for reassortment with other influenza viruses. Bmc Medicine. 7: 43. PMID 19728864 DOI: 10.1186/1741-7015-7-43 |
0.398 |
|
| 2008 |
Boni MF, Buckee CO, White NJ. Mathematical models for a new era of malaria eradication. Plos Medicine. 5: e231. PMID 19067482 DOI: 10.1371/Journal.Pmed.0050231 |
0.312 |
|
| 2008 |
Boni MF, Smith DL, Laxminarayan R. Benefits of using multiple first-line therapies against malaria. Proceedings of the National Academy of Sciences of the United States of America. 105: 14216-21. PMID 18780786 DOI: 10.1073/Pnas.0804628105 |
0.317 |
|
| 2008 |
Boni MF. Vaccination and antigenic drift in influenza. Vaccine. 26: C8-14. PMID 18773534 DOI: 10.1016/J.Vaccine.2008.04.011 |
0.356 |
|
| 2008 |
Klein EY, Smith DL, Boni MF, Laxminarayan R. Clinically immune hosts as a refuge for drug-sensitive malaria parasites. Malaria Journal. 7: 67. PMID 18439283 DOI: 10.1186/1475-2875-7-67 |
0.325 |
|
| 2008 |
Boni MF, Zhou Y, Taubenberger JK, Holmes EC. Homologous recombination is very rare or absent in human influenza A virus. Journal of Virology. 82: 4807-11. PMID 18353939 DOI: 10.1128/Jvi.02683-07 |
0.4 |
|
| 2007 |
Boni MF, Posada D, Feldman MW. An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics. 176: 1035-47. PMID 17409078 DOI: 10.1534/Genetics.106.068874 |
0.432 |
|
| 2006 |
Boni MF, Gog JR, Andreasen V, Feldman MW. Epidemic dynamics and antigenic evolution in a single season of influenza A. Proceedings. Biological Sciences / the Royal Society. 273: 1307-16. PMID 16777717 DOI: 10.1098/Rspb.2006.3466 |
0.52 |
|
| 2005 |
Boni MF, Feldman MW. Evolution of antibiotic resistance by human and bacterial niche construction. Evolution; International Journal of Organic Evolution. 59: 477-91. PMID 15856691 DOI: 10.1111/J.0014-3820.2005.Tb01008.X |
0.469 |
|
| 2004 |
Boni MF, Gog JR, Andreasen V, Christiansen FB. Influenza drift and epidemic size: the race between generating and escaping immunity. Theoretical Population Biology. 65: 179-91. PMID 14766191 DOI: 10.1016/J.Tpb.2003.10.002 |
0.406 |
|
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