Andrew V. Uzilov, Ph.D.

Affiliations: 
2013 Biomolecular Engineering and Bioinformatics University of California, Santa Cruz, Santa Cruz, CA, United States 
Area:
Bioinformatics Biology
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"Andrew Uzilov"
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Todd Lowe grad student 2013 UC Santa Cruz
 (Novel applications of high-throughput RNA sequencing: Mapping RNA structure and discovering circular RNAs.)
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Publications

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Kueffner R, Li H, Cheung K, et al. (2019) VONC: A solution for the clinical assessment of somatic genomic alterations. Journal of Clinical Oncology. 37: e13155-e13155
Lui LM, Uzilov AV, Bernick DL, et al. (2018) Methylation guide RNA evolution in archaea: structure, function and genomic organization of 110 C/D box sRNA families across six Pyrobaculum species. Nucleic Acids Research
Pandya C, Uzilov AV, Bellizzi J, et al. (2017) Genomic profiling reveals mutational landscape in parathyroid carcinomas. Jci Insight. 2: e92061
Galsky MD, Uzilov AV, McBride RB, et al. (2017) DNA damage response (DDR) gene mutations (mut), mut load, and sensitivity to chemotherapy plus immune checkpoint blockade in urothelial cancer (UC). Journal of Clinical Oncology. 35: 300-300
Uzilov AV, Underwood JG. (2016) High-Throughput Nuclease Probing of RNA Structures Using FragSeq. Methods in Molecular Biology (Clifton, N.J.). 1490: 105-34
Uzilov AV, Ding W, Fink MY, et al. (2016) Development and clinical application of an integrative genomic approach to personalized cancer therapy. Genome Medicine. 8: 62
Rykunov D, Beckmann ND, Li H, et al. (2016) A new molecular signature method for prediction of driver cancer pathways from transcriptional data. Nucleic Acids Research
Rozehnal JM, Posner MR, Ang C, et al. (2016) Transgenic drosophila as a drug-screening platform in colorectal cancer and medullary thyroid cancer. Journal of Clinical Oncology. 34: e23164-e23164
Ma M, Ru Y, Chuang LS, et al. (2015) Disease-associated variants in different categories of disease located in distinct regulatory elements. Bmc Genomics. 16: S3
Pereira EB, Camacho-Vanegas O, Anand S, et al. (2015) Abstract 2398: Precision molecular biomarkers for the surveillance of gynecologic malignancies: Rapid and efficient pipeline for the design and highly sensitive detection of circulating tumor DNA Cancer Research. 75: 2398-2398
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