Barry H. Honig
Affiliations: | Biochemistry and Molecular Biophysics | Columbia University, New York, NY |
Area:
computational biophysics and bioinformaticsWebsite:
http://cpmcnet.columbia.edu/dept/gsas/biochem/faculty/honig.htmlGoogle:
"Barry H Honig"Bio:
http://www.nasonline.org/member-directory/members/46073.html
http://wiki.c2b2.columbia.edu/honiglab_public/index.php/Main_Page
http://www.hhmi.org/scientists/barry-honig
http://www.tau.ac.il/institutes/advanced/reports/annual2010.pdf
Mean distance: 7.58 | S | N | B | C | P |
Parents
Sign in to add mentor| Joshua Jortner | grad student | 1968 | Weizmann Institute | |
| (Two photon absorption processes in molecules) | ||||
| Martin Karplus | post-doc | Harvard | ||
| Cyrus Levinthal | post-doc | Columbia | ||
Children
Sign in to add trainee| Lucy Rachel Forrest | grad student | Columbia | |
| Michael K. Gilson | grad student | 1983-1987 | Columbia |
| Zhexin Xiang | grad student | 2001 | Columbia |
| Donald S. Petrey | grad student | 2002 | Columbia |
| Marina Gimpelev | grad student | 2004 | Columbia |
| Chien P. Chen | grad student | 2006 | Columbia |
| Trevor W. Siggers | grad student | 2006 | Columbia |
| Cinque S. Soto | grad student | 2006 | Columbia |
| Shoshana Posy | grad student | 2008 | Columbia |
| Christopher L. Tang | grad student | 2008 | Columbia |
| Andrew S. Kuziemko | grad student | 2011 | Columbia |
| Qiangfeng C. Zhang | grad student | 2011 | Columbia |
| Peng Liu | grad student | 2012 | Columbia |
| Jared Sampson | grad student | 2015-2020 | Columbia |
| Alina P. Sergeeva | post-doc | 2012- | Columbia |
| Haiqing Zhao | post-doc | 2018- | Columbia |
| B. Jayaram | post-doc | 1987-1988 | Columbia |
| Yinghao Wu | post-doc | 2008-2012 | Columbia |
BETA: Related publications
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Publications
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| Liao J, Sergeeva AP, Harder ED, et al. (2024) A Method for Treating Significant Conformational Changes in Alchemical Free Energy Simulations of Protein-Ligand Binding. Journal of Chemical Theory and Computation. 20: 8609-8623 |
| Morano NC, Lopez DH, Meltzer H, et al. (2024) inhibition of co-expressed DIPs and Dprs shapes neural development. Biorxiv : the Preprint Server For Biology |
| Sampson JM, Cannon DA, Duan J, et al. (2024) Robust prediction of relative binding energies for protein-protein complex mutations using free energy perturbation calculations. Journal of Molecular Biology. 168640 |
| Zhao H, Petrey D, Murray D, et al. (2024) ZEPPI: Proteome-scale sequence-based evaluation of protein-protein interaction models. Proceedings of the National Academy of Sciences of the United States of America. 121: e2400260121 |
| Sampson JM, Cannon DA, Duan J, et al. (2024) Robust prediction of relative binding energies for protein-protein complex mutations using free energy perturbation calculations Journal of Molecular Biology |
| Zipursky S, Lee J, Sergeeva A, et al. (2024) Astrocyte morphogenesis requires self-recognition. Research Square |
| Zhao H, Murray D, Petrey D, et al. (2023) ZEPPI: proteome-scale sequence-based evaluation of protein-protein interaction models. Research Square |
| Nagendra K, Izzet A, Judd NB, et al. (2023) Push-pull mechanics of E-cadherin ectodomains in biomimetic adhesions. Biophysical Journal |
| Sergeeva AP, Katsamba PS, Liao J, et al. (2023) Free Energy Perturbation Calculations of Mutation Effects on SARS-CoV-2 RBD::ACE2 Binding Affinity. Journal of Molecular Biology. 435: 168187 |
| Su Z, Kon N, Yi J, et al. (2023) Specific regulation of BACH1 by the hotspot mutant p53 reveals a distinct gain-of-function mechanism. Nature Cancer |