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Håkan Viklund, Ph.D. - Publications

Affiliations: 
Biochemistry and Biophysics Stockholm University, Stockholm, Stockholms län, Sweden 
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2009 Bernsel A, Viklund H, Hennerdal A, Elofsson A. TOPCONS: consensus prediction of membrane protein topology. Nucleic Acids Research. 37: W465-8. PMID 19429891 DOI: 10.1093/Nar/Gkp363  0.687
2008 Viklund H, Bernsel A, Skwark M, Elofsson A. SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology. Bioinformatics (Oxford, England). 24: 2928-9. PMID 18945683 DOI: 10.1093/Bioinformatics/Btn550  0.723
2008 Bernsel A, Viklund H, Falk J, Lindahl E, von Heijne G, Elofsson A. Prediction of membrane-protein topology from first principles. Proceedings of the National Academy of Sciences of the United States of America. 105: 7177-81. PMID 18477697 DOI: 10.1073/Pnas.0711151105  0.813
2008 Viklund H, Elofsson A. OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar. Bioinformatics (Oxford, England). 24: 1662-8. PMID 18474507 DOI: 10.1093/Bioinformatics/Btn221  0.779
2008 Papaloukas C, Granseth E, Viklund H, Elofsson A. Estimating the length of transmembrane helices using Z-coordinate predictions. Protein Science : a Publication of the Protein Society. 17: 271-8. PMID 18096645 DOI: 10.1110/Ps.073036108  0.803
2008 Bernsel A, Viklund H, Elofsson A. Remote homology detection of integral membrane proteins using conserved sequence features. Proteins. 71: 1387-99. PMID 18076048 DOI: 10.1002/Prot.21825  0.783
2006 Granseth E, Viklund H, Elofsson A. ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins. Bioinformatics (Oxford, England). 22: e191-6. PMID 16873471 DOI: 10.1093/Bioinformatics/Btl206  0.805
2006 Viklund H, Granseth E, Elofsson A. Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: application to complete genomes. Journal of Molecular Biology. 361: 591-603. PMID 16860824 DOI: 10.1016/J.Jmb.2006.06.037  0.765
2006 Amico M, Finelli M, Rossi I, Zauli A, Elofsson A, Viklund H, von Heijne G, Jones D, Krogh A, Fariselli P, Luigi Martelli P, Casadio R. PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. Nucleic Acids Research. 34: W169-72. PMID 16844984 DOI: 10.1093/Nar/Gkl208  0.744
2004 Viklund H, Elofsson A. Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information. Protein Science : a Publication of the Protein Society. 13: 1908-17. PMID 15215532 DOI: 10.1110/Ps.04625404  0.792
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