Refaat E. Gabr, Ph.D. - Publications

Affiliations: 
2009 Johns Hopkins University, Baltimore, MD 
Area:
Electronics and Electrical Engineering, Physiology Biology, Biochemistry

32/61 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Goldenberg JR, Hays AG, Gabr RE, Schӓr M, Samuel TJ, Yanek LR, Gerstenblith G, Bottomley PA, Weiss RG. Energetic Basis of Recovered Ejection Fraction in Human Heart Failure. Circulation. 148: 1976-1978. PMID 38079486 DOI: 10.1161/CIRCULATIONAHA.123.065217  0.466
2022 Keceli G, Gupta A, Sourdon J, Gabr R, Schär M, Dey S, Tocchetti CG, Stuber A, Agrimi J, Zhang Y, Leppo M, Steenbergen C, Lai S, Yanek LR, O'Rourke B, et al. Mitochondrial Creatine Kinase Attenuates Pathologic Remodeling in Heart Failure. Circulation Research. CIRCRESAHA121319648. PMID 35109669 DOI: 10.1161/CIRCRESAHA.121.319648  0.513
2020 Warth RJ, Zandiyeh P, Rao M, Gabr RE, Tashman S, Kumaravel M, Narayana PA, Lowe WR, Harner CD. Quantitative Assessment of In Vivo Human Anterior Cruciate Ligament Autograft Remodeling: A 3-Dimensional UTE-T2* Imaging Study. The American Journal of Sports Medicine. 363546520949855. PMID 32915640 DOI: 10.1177/0363546520949855  0.343
2020 Zandiyeh P, Rao M, Gabr R, Narayana P, Tashman S, Kumaravel M, Lowe W, Harner C, Warth R. Three-Dimensional UTE MR Imaging: Twelve-Month Analysis of ACL Autograft Remodeling Orthopaedic Journal of Sports Medicine. 8: 2325967120S0047. DOI: 10.1177/2325967120S00479  0.317
2019 Narayana PA, Coronado I, Sujit SJ, Sun X, Wolinsky JS, Gabr RE. Are multi-contrast magnetic resonance images necessary for segmenting multiple sclerosis brains? A large cohort study based on deep learning. Magnetic Resonance Imaging. 65: 8-14. PMID 31670238 DOI: 10.1016/J.Mri.2019.10.003  0.348
2019 Haque ME, Gabr RE, George SD, Zhao X, Boren SB, Zhang X, Ting SM, Sun G, Hasan KM, Savitz S, Aronowski J. Serial Metabolic Evaluation of Perihematomal Tissues in the Intracerebral Hemorrhage Pig Model. Frontiers in Neuroscience. 13: 888. PMID 31496934 DOI: 10.3389/Fnins.2019.00888  0.311
2018 Gabr RE, El-Sharkawy AM, Schär M, Panjrath GS, Gerstenblith G, Weiss RG, Bottomley PA. Cardiac work is related to creatine kinase energy supply in human heart failure: a cardiovascular magnetic resonance spectroscopy study. Journal of Cardiovascular Magnetic Resonance : Official Journal of the Society For Cardiovascular Magnetic Resonance. 20: 81. PMID 30526611 DOI: 10.1186/S12968-018-0491-6  0.701
2018 Allen WJ, Gabr RE, Tefera GB, Pednekar AS, Vaughn MW, Narayana PA. Platform for Automated Real-Time High Performance Analytics on Medical Image Data. Ieee Journal of Biomedical and Health Informatics. 22: 318-324. PMID 29505399 DOI: 10.1109/Jbhi.2017.2771299  0.312
2016 Gabr RE, Tefera GB, Allen WJ, Pednekar AS, Narayana PA. Erratum to: GRAPE: a graphical pipeline environment for image analysis in adaptive magnetic resonance imaging. International Journal of Computer Assisted Radiology and Surgery. PMID 27905027 DOI: 10.1007/S11548-016-1508-Y  0.319
2016 Gabr RE, Pednekar AS, Govindarajan KA, Sun X, Riascos RF, Ramírez MG, Hasan KM, Lincoln JA, Nelson F, Wolinsky JS, Narayana PA. Patient-specific 3D FLAIR for enhanced visualization of brain white matter lesions in multiple sclerosis. Journal of Magnetic Resonance Imaging : Jmri. PMID 27869333 DOI: 10.1002/Jmri.25557  0.315
2016 Gabr RE, Tefera GB, Allen WJ, Pednekar A, Narayana PA. GRAPE: a graphical pipeline environment for image analysis in adaptive magnetic resonance imaging. International Journal of Computer Assisted Radiology and Surgery. PMID 27796790 DOI: 10.1007/S11548-016-1495-Z  0.338
2015 Shetty AN, Gabr RE, Rendon DA, Cassady CI, Mehollin-Ray AR, Lee W. Improving spectral quality in fetal brain magnetic resonance spectroscopy using constructive averaging. Prenatal Diagnosis. 35: 1294-300. PMID 26348874 DOI: 10.1002/Pd.4689  0.361
2015 Schär M, Gabr RE, El-Sharkawy AM, Steinberg A, Bottomley PA, Weiss RG. Two repetition time saturation transfer (TwiST) with spill-over correction to measure creatine kinase reaction rates in human hearts. Journal of Cardiovascular Magnetic Resonance : Official Journal of the Society For Cardiovascular Magnetic Resonance. 17: 70. PMID 26253320 DOI: 10.1186/S12968-015-0175-4  0.717
2015 Gabr RE, Sun X, Pednekar AS, Narayana PA. Automated patient-specific optimization of three-dimensional double-inversion recovery magnetic resonance imaging. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. PMID 25761973 DOI: 10.1002/Mrm.25616  0.336
2015 Shetty A, Gabr R, Rendon D, Cassady C, Mehollin-Ray A, Lee W. OC06.03: Constructive averaging improves motion-induced signal loss in fetal brain magnetic resonance spectroscopy (MRS) Ultrasound in Obstetrics & Gynecology. 46: 12-12. DOI: 10.1002/Uog.14987  0.347
2013 Zhang Y, Gabr RE, Zhou J, Weiss RG, Bottomley PA. Spectroscopy with linear algebraic modeling (SLAM): speed and quantification in brain tumor studies. Proceedings of the International Society For Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition. International Society For Magnetic Resonance in Medicine. Scientific Meeting and Exhibition. 21: 0530-530. PMID 25346625  0.417
2013 Zhang Y, Gabr RE, Zhou J, Weiss RG, Bottomley PA. Highly-accelerated quantitative 2D and 3D localized spectroscopy with linear algebraic modeling (SLAM) and sensitivity encoding. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 237: 125-38. PMID 24188921 DOI: 10.1016/J.Jmr.2013.09.018  0.574
2013 El-Sharkawy AM, Gabr RE, Schär M, Weiss RG, Bottomley PA. Quantification of human high-energy phosphate metabolite concentrations at 3 T with partial volume and sensitivity corrections. Nmr in Biomedicine. 26: 1363-71. PMID 23729378 DOI: 10.1002/Nbm.2961  0.71
2013 Panjrath GS, Schär M, El-Sharkawy A, Gabr R, Schulman SP, Gerstenblith G, Bottomley PA, Weiss RG. Skeletal muscle ATP kinetics during exercise in patients with systolic heart failure Journal of Cardiovascular Magnetic Resonance. 15. DOI: 10.1186/1532-429X-15-S1-O29  0.71
2012 Zhang Y, Gabr RE, Schär M, Weiss RG, Bottomley PA. Magnetic resonance Spectroscopy with Linear Algebraic Modeling (SLAM) for higher speed and sensitivity. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 218: 66-76. PMID 22578557 DOI: 10.1016/J.Jmr.2012.03.008  0.601
2012 Gabr RE, Weiss RG, Bottomley PA. Erratum to “Correcting reaction rates measured by saturation-transfer magnetic resonance spectroscopy” [J. Magn. Reson. 191 (2008) 248–258] Journal of Magnetic Resonance. 217: 112. DOI: 10.1016/J.Jmr.2012.02.010  0.551
2011 Gabr RE, El-Sharkawy AM, Schär M, Weiss RG, Bottomley PA. Measuring energy diffusion: phosphocreatine in human skeletal muscle. Proceedings of the International Society For Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition. International Society For Magnetic Resonance in Medicine. Scientific Meeting and Exhibition. 19: 1140. PMID 25285045  0.478
2011 Zhang Y, Gabr RE, Schär M, Weiss RG, Bottomley PA. Encoding of pre-selected compartments produces large SNR and speed advantages for P MRS. Proceedings of the International Society For Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition. International Society For Magnetic Resonance in Medicine. Scientific Meeting and Exhibition. 19: 1438. PMID 21984872  0.431
2011 Gabr RE, El-Sharkawy AM, Schär M, Weiss RG, Bottomley PA. High-energy phosphate transfer in human muscle: diffusion of phosphocreatine. American Journal of Physiology. Cell Physiology. 301: C234-41. PMID 21368292 DOI: 10.1152/Ajpcell.00500.2010  0.688
2010 Ahmed HM, Gabr RE, Youssef ABM, Kadah YM. Optimizing kernel size in generalized auto-calibrating partially parallel acquisition in parallel magnetic resonance imaging Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7622. DOI: 10.1117/12.844597  0.327
2009 Gabr RE, Schär M, Edelstein AD, Kraitchman DL, Bottomley PA, Edelstein WA. MRI dynamic range and its compatibility with signal transmission media. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 198: 137-45. PMID 19251444 DOI: 10.1016/J.Jmr.2009.01.037  0.54
2008 Gabr RE, Schar M, Edelstein AD, Bottomley PA, Edelstein WA. MRI Dynamic Range: Theory and Measurement. Proceedings of the International Society For Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition. International Society For Magnetic Resonance in Medicine. Scientific Meeting and Exhibition. 2008: 1129. PMID 25506271  0.44
2008 Gabr RE, Weiss RG, Bottomley PA. Correcting reaction rates measured by saturation-transfer magnetic resonance spectroscopy Journal of Magnetic Resonance. 191: 248-258. PMID 18226939 DOI: 10.1016/J.Jmr.2007.12.015  0.568
2006 Kadah YM, Fahmy AS, Gabr RE, Heberlein K, Hu XP. Progressive magnetic resonance image reconstruction based on iterative solution of a sparse linear system. International Journal of Biomedical Imaging. 2006: 49378. PMID 23165034 DOI: 10.1155/Ijbi/2006/49378  0.315
2006 Gabr RE, Aksit P, Bottomley PA, Youssef AB, Kadah YM. Deconvolution-interpolation gridding (DING): accurate reconstruction for arbitrary k-space trajectories. Magnetic Resonance in Medicine. 56: 1182-91. PMID 17089380 DOI: 10.1002/Mrm.21095  0.493
2006 Gabr RE, Sathyanarayana S, Schär M, Weiss RG, Bottomley PA. On restoring motion-induced signal loss in single-voxel magnetic resonance spectra Magnetic Resonance in Medicine. 56: 754-760. PMID 16964612 DOI: 10.1002/Mrm.21015  0.65
2006 Gabr RE, Ouwerkerk R, Bottomley PA. Quantifying in vivo MR spectra with circles. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 179: 152-63. PMID 16325436 DOI: 10.1016/J.Jmr.2005.11.004  0.542
Low-probability matches (unlikely to be authored by this person)
2019 Haque ME, Gabr RE, Hasan KM, George S, Arevalo OD, Zha A, Alderman S, Jeevarajan J, Mas MF, Zhang X, Satani N, Friedman ER, Sitton CW, Savitz S. Ongoing Secondary Degeneration of the Limbic System in Patients With Ischemic Stroke: A Longitudinal MRI Study. Frontiers in Neurology. 10: 154. PMID 30890995 DOI: 10.3389/Fneur.2019.00154  0.288
2019 Narayana PA, Coronado I, Sujit SJ, Wolinsky JS, Lublin FD, Gabr RE. Deep Learning for Predicting Enhancing Lesions in Multiple Sclerosis from Noncontrast MRI. Radiology. 191061. PMID 31845845 DOI: 10.1148/Radiol.2019191061  0.286
2016 Keser Z, Hasan KM, Mwangi B, Gabr RE, Steinberg JL, Wilken J, Wolinsky JS, Nelson FM. Limbic Pathway Correlates of Cognitive Impairment in Multiple Sclerosis. Journal of Neuroimaging : Official Journal of the American Society of Neuroimaging. PMID 27541485 DOI: 10.1111/Jon.12381  0.285
2019 Sujit SJ, Coronado I, Kamali A, Narayana PA, Gabr RE. Automated image quality evaluation of structural brain MRI using an ensemble of deep learning networks. Journal of Magnetic Resonance Imaging : Jmri. PMID 30811739 DOI: 10.1002/Jmri.26693  0.279
2016 Gabr RE, Hasan KM, Haque ME, Nelson FM, Wolinsky JS, Narayana PA. Optimal combination of FLAIR and T2-weighted MRI for improved lesion contrast in multiple sclerosis. Journal of Magnetic Resonance Imaging : Jmri. PMID 27126898 DOI: 10.1002/Jmri.25281  0.278
2018 Gabr RE, Pednekar AS, Kamali A, Lincoln JA, Nelson FM, Wolinsky JS, Narayana PA. Interleaved susceptibility-weighted and FLAIR MRI for imaging lesion-penetrating veins in multiple sclerosis. Magnetic Resonance in Medicine. PMID 29334139 DOI: 10.1002/Mrm.27091  0.277
2019 Haque ME, Gabr RE, George SD, Boren SB, Vahidy FS, Zhang X, Arevalo OD, Alderman S, Narayana PA, Hasan KM, Friedman ER, Sitton CW, Savitz SI. Serial Cerebral Metabolic Changes in Patients With Ischemic Stroke Treated With Autologous Bone Marrow Derived Mononuclear Cells. Frontiers in Neurology. 10: 141. PMID 30858820 DOI: 10.3389/Fneur.2019.00141  0.27
2019 Gabr RE, Zunta-Soares G, Soares JC, Narayana PA. MRI acoustic noise-modulated computer animations for patient distraction and entertainment with application in pediatric psychiatric patients. Magnetic Resonance Imaging. PMID 31078614 DOI: 10.1016/J.Mri.2019.05.014  0.268
2019 Varadhan R, Russ DW, Gabr RE, Huang J, Kalyani RR, Xue QL, Cappola AR, Bandeen-Roche K, Fried LP. Relationship of Physical Frailty to Phosphocreatine Recovery in Muscle after Mild Exercise Stress in the Oldest-Old Women. The Journal of Frailty & Aging. 8: 162-168. PMID 31637400 DOI: 10.14283/Jfa.2019.21  0.262
2019 Narayana PA, Coronado I, Sujit SJ, Wolinsky JS, Lublin FD, Gabr RE. Deep-Learning-Based Neural Tissue Segmentation of MRI in Multiple Sclerosis: Effect of Training Set Size. Journal of Magnetic Resonance Imaging : Jmri. PMID 31625650 DOI: 10.1002/Jmri.26959  0.261
2018 Mohamed ASR, Bahig H, Aristophanous M, Blanchard P, Kamal M, Ding Y, Cardenas CE, Brock KK, Lai SY, Hutcheson KA, Phan J, Wang J, Ibbott G, Gabr RE, Narayana PA, et al. Prospective study of the feasibility and dosimetric advantages of MRI-guided dose adaptation for human papillomavirus positive oropharyngeal cancer patients compared with standard IMRT. Clinical and Translational Radiation Oncology. 11: 11-18. PMID 30014042 DOI: 10.1016/J.Ctro.2018.04.005  0.252
2019 Gabr RE, Coronado I, Robinson M, Sujit SJ, Datta S, Sun X, Allen WJ, Lublin FD, Wolinsky JS, Narayana PA. Brain and lesion segmentation in multiple sclerosis using fully convolutional neural networks: A large-scale study. Multiple Sclerosis (Houndmills, Basingstoke, England). 1352458519856843. PMID 31190607 DOI: 10.1177/1352458519856843  0.246
2020 Kamali A, Sullivan KC, Rahmani F, Gandhi A, Aein A, Arevalo O, Rabiei P, Choi SJ, Zhang X, Gabr RE, Riascos RF. Indentation and Transverse Diameter of the Meckel Cave: Imaging Markers to Diagnose Idiopathic Intracranial Hypertension. Ajnr. American Journal of Neuroradiology. PMID 32763895 DOI: 10.3174/Ajnr.A6682  0.241
2016 Gabr RE, Pednekar AS, Sun X, Narayana PA. A framework for precision magnetic resonance imaging: Initial results 3rd Ieee Embs International Conference On Biomedical and Health Informatics, Bhi 2016. 276-279. DOI: 10.1109/BHI.2016.7455888  0.241
2018 Haque ME, Gabr RE, Zhao X, Hasan KM, Valenzuela A, Narayana PA, Ting SM, Sun G, Savitz SI, Aronowski J. Serial quantitative neuroimaging of iron in the intracerebral hemorrhage pig model. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X17751548. PMID 29292651 DOI: 10.1177/0271678X17751548  0.238
2020 Coronado I, Gabr RE, Narayana PA. Deep learning segmentation of gadolinium-enhancing lesions in multiple sclerosis. Multiple Sclerosis (Houndmills, Basingstoke, England). 1352458520921364. PMID 32442043 DOI: 10.1177/1352458520921364  0.234
2014 Gabr RE, Pednekar A, Sun X, Narayana PA. Online brain tissue classification in multiple sclerosis using a scanner-integrated image analysis pipeline Visapp 2014 - Proceedings of the 9th International Conference On Computer Vision Theory and Applications. 3: 106-110.  0.222
2008 Ahmed HM, Gabr RE, Kadah YM, Youssef AM. A new method for data acquisition and image reconstruction in parallel magnetic resonance imaging 2008 Cairo International Biomedical Engineering Conference, Cibec 2008. DOI: 10.1109/CIBEC.2008.4786092  0.202
2009 Mohamed H, Gabr RE, Youssef ABM, Kadah YM. New approach for data acquisition and image reconstruction in parallel magnetic resonance imaging National Radio Science Conference, Nrsc, Proceedings 0.198
2015 Shetty AN, Gabr RE, Rendon DA, Cassady CI, Mehollin-Ray AR, Lee W. Improving spectral quality in fetal brain magnetic resonance spectroscopy using constructive averaging Prenatal Diagnosis. 35: 1294-1300. DOI: 10.1002/pd.4689  0.195
2003 Ahmed HM, Gabr RE, Youssef ABM, Heberlein K, Hu XP, Kadah YM. Combined intra- and inter-slice motion artifact suppression in magnetic resonance imaging Proceedings of Spie - the International Society For Optical Engineering. 5032: 296-305. DOI: 10.1117/12.481403  0.194
2015 Rister B, Reiter D, Zhang H, Volz D, Horowitz M, Gabr RE, Cavallaro JR. Scale- and orientation-invariant keypoints in higher-dimensional data Proceedings - International Conference On Image Processing, Icip. 2015: 3490-3494. DOI: 10.1109/ICIP.2015.7351453  0.169
2023 Gabr RE, Lincoln JA, Hasan KM, Kramer LA. Functional assessment of the dural lymphatic vessels using dynamic contrast MRI in multiple sclerosis. Brain and Behavior. e3042. PMID 37218403 DOI: 10.1002/brb3.3042  0.16
2024 Sima DM, Phan TV, Van Eyndhoven S, Vercruyssen S, Magalhães R, Liseune A, Brys A, Frenyo P, Terzopoulos V, Maes C, Guo J, Hughes R, Gabr RE, Huijbers W, Saha-Chaudhuri P, et al. Artificial Intelligence Assistive Software Tool for Automated Detection and Quantification of Amyloid-Related Imaging Abnormalities. Jama Network Open. 7: e2355800. PMID 38345816 DOI: 10.1001/jamanetworkopen.2023.55800  0.149
2021 Gabr RE. Editorial for "Reliability of Changes in Brain Volume Determined by Longitudinal Voxel-Based Morphometry". Journal of Magnetic Resonance Imaging : Jmri. PMID 33974335 DOI: 10.1002/jmri.27683  0.121
2023 Bayoumi A, Hasan KM, Patino J, Keser Z, Thomas JA, Gabr RE, Pedroza C, Kamali A, Schiess MC, Wolinsky JS, Lincoln JA. Identifying the white matter pathways involved in multiple sclerosis-related tremor using diffusion tensor imaging. Multiple Sclerosis Journal - Experimental, Translational and Clinical. 9: 20552173231208271. PMID 38021452 DOI: 10.1177/20552173231208271  0.118
2022 Kramer LA, Hasan KM, Gabr RE, Macias BR, Marshall-Goebel K, Laurie SS, Hargens AR. Cerebrovascular Effects of Lower Body Negative Pressure at 3T MRI: Implications for Long-Duration Space Travel. Journal of Magnetic Resonance Imaging : Jmri. PMID 35119781 DOI: 10.1002/jmri.28102  0.107
2022 Narayana PA, Gabr RE. Editorial for "A Multi-Modality Fusion Deep Learning Model Based on DCE-MRI for Preoperative Prediction of Microvascular Invasion in Intrahepatic Cholangiocarcinoma". Journal of Magnetic Resonance Imaging : Jmri. PMID 35188693 DOI: 10.1002/jmri.28124  0.096
2022 Lincoln JA, Hasan KM, Gabr RE, Wolinsky JS. Characterizing the time course of cerebrovascular reactivity in multiple sclerosis. Journal of Neuroimaging : Official Journal of the American Society of Neuroimaging. PMID 35165962 DOI: 10.1111/jon.12979  0.096
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