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Claudius F. Kratochwil, Ph.D. - Publications

Affiliations: 
2021- Biology University of Helsinki, Helsingfors, Finland 
Area:
Evolutionary Genetics, Neuroscience, Developmental Biology, Gene Regulation, Epigenetics
Website:
http://www.intevobio.fi/
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Clark B, Kuwalekar M, Fischer B, Woltering J, Biran J, Juntti S, Kratochwil CF, Santos ME, Almeida MV. Genome editing in East African cichlids and tilapias: state-of-the-art and future directions. Open Biology. 13: 230257. PMID 38018094 DOI: 10.1098/rsob.230257  0.667
2023 Santos ME, Lopes JF, Kratochwil CF. East African cichlid fishes. Evodevo. 14: 1. PMID 36604760 DOI: 10.1186/s13227-022-00205-5  0.389
2022 Kratochwil CF, Liang Y, Gerwin J, Franchini P, Meyer A. Comparative ontogenetic and transcriptomic analyses shed light on color pattern divergence in cichlid fishes. Evolution & Development. PMID 35971657 DOI: 10.1111/ede.12416  0.72
2022 Nacif CL, Kratochwil CF, Kautt AF, Nater A, Machado-Schiaffino G, Meyer A, Henning F. Molecular parallelism in the evolution of a master sex-determining role for the anti-mullerian hormone receptor 2 gene (amhr2) in Midas cichlids. Molecular Ecology. PMID 35403749 DOI: 10.1111/mec.16466  0.521
2022 Kratochwil CF, Kautt AF, Rometsch SJ, Meyer A. Benefits and limitations of a new genome-based PCR-RFLP genotyping assay (GB-RFLP): A SNP-based detection method for identification of species in extremely young adaptive radiations. Ecology and Evolution. 12: e8751. PMID 35356554 DOI: 10.1002/ece3.8751  0.519
2022 Urban S, Gerwin J, Hulsey CD, Meyer A, Kratochwil CF. The repeated evolution of stripe patterns is correlated with body morphology in the adaptive radiations of East African cichlid fishes. Ecology and Evolution. 12: e8568. PMID 35154652 DOI: 10.1002/ece3.8568  0.511
2022 Kratochwil CF, Kautt AF, Nater A, Härer A, Liang Y, Henning F, Meyer A. An intronic transposon insertion associates with a trans-species color polymorphism in Midas cichlid fishes. Nature Communications. 13: 296. PMID 35027541 DOI: 10.1038/s41467-021-27685-8  0.506
2021 Gerwin J, Urban S, Meyer A, Kratochwil CF. Of bars and stripes: a Malawi cichlid hybrid cross provides insights into genetic modularity and evolution of modifier loci underlying color pattern diversification. Molecular Ecology. PMID 34322938 DOI: 10.1111/mec.16097  0.557
2021 Liang Y, Grauvogl M, Meyer A, Kratochwil CF. Functional conservation and divergence of color-pattern-related agouti family genes in teleost fishes. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 33755299 DOI: 10.1002/jez.b.23041  0.498
2020 Kautt AF, Kratochwil CF, Nater A, Machado-Schiaffino G, Olave M, Henning F, Torres-Dowdall J, Härer A, Hulsey CD, Franchini P, Pippel M, Myers EW, Meyer A. Contrasting signatures of genomic divergence during sympatric speciation. Nature. PMID 33116308 DOI: 10.1038/s41586-020-2845-0  0.721
2020 Urban S, Nater A, Meyer A, Kratochwil CF. Different sources of allelic variation drove repeated color pattern divergence in cichlid fishes. Molecular Biology and Evolution. PMID 32941629 DOI: 10.1093/Molbev/Msaa237  0.588
2020 Liang Y, Meyer A, Kratochwil CF. Neural innervation as a potential trigger of morphological color change and sexual dimorphism in cichlid fish. Scientific Reports. 10: 12329. PMID 32704058 DOI: 10.1038/S41598-020-69239-W  0.525
2020 Maheshwari U, Kraus D, Vilain N, Holwerda SJB, Cankovic V, Maiorano NA, Kohler H, Satoh D, Sigrist M, Arber S, Kratochwil CF, Di Meglio T, Ducret S, Rijli FM. Postmitotic Hoxa5 Expression Specifies Pontine Neuron Positional Identity and Input Connectivity of Cortical Afferent Subsets. Cell Reports. 31: 107767. PMID 32553152 DOI: 10.1016/J.Celrep.2020.107767  0.656
2020 Liang Y, Gerwin J, Meyer A, Kratochwil CF. Developmental and Cellular Basis of Vertical Bar Color Patterns in the East African Cichlid Fish . Frontiers in Cell and Developmental Biology. 8: 62. PMID 32117987 DOI: 10.3389/Fcell.2020.00062  0.562
2020 Kratochwil CF, Rijli FM. The Cre/Lox System to Assess the Development of the Mouse Brain. Methods in Molecular Biology (Clifton, N.J.). 2047: 491-512. PMID 31552673 DOI: 10.1007/978-1-4939-9732-9_28  0.627
2019 Montiglio PO, Gotanda KM, Kratochwil CF, Laskowski KL, Farine DR. Hierarchically embedded interaction networks represent a missing link in the study of behavioral and community ecology. Behavioral Ecology : Official Journal of the International Society For Behavioral Ecology. 31: 279-286. PMID 32210523 DOI: 10.1093/Beheco/Arz168  0.377
2019 Kratochwil CF, Liang Y, Urban S, Torres-Dowdall J, Meyer A. Evolutionary dynamics of structural variation at a key locus for color pattern diversification in cichlid fishes. Genome Biology and Evolution. PMID 31821504 DOI: 10.1093/Gbe/Evz261  0.582
2019 Kratochwil CF. Molecular mechanisms of convergent color pattern evolution. Zoology (Jena, Germany). 134: 66-68. PMID 31146908 DOI: 10.1016/J.Zool.2019.04.004  0.512
2019 Kratochwil CF, Meyer A. Fragile DNA contributes to repeated evolution. Genome Biology. 20: 39. PMID 30791923 DOI: 10.1186/S13059-019-1655-X  0.501
2018 Kratochwil CF, Liang Y, Gerwin J, Woltering JM, Urban S, Henning F, Machado-Schiaffino G, Hulsey CD, Meyer A. Agouti-related peptide 2 facilitates convergent evolution of stripe patterns across cichlid fish radiations. Science (New York, N.Y.). 362: 457-460. PMID 30361373 DOI: 10.1126/Science.Aao6809  0.601
2018 Saemi-Komsari M, Mousavi-Sabet H, Kratochwil CF, Sattari M, Eagderi S, Meyer A. Early developmental and allometric patterns in the electric yellow cichlid Labidochromis caeruleus. Journal of Fish Biology. PMID 29624691 DOI: 10.1111/Jfb.13627  0.511
2018 Sturm E, Knaus J, Kratochwil C, Carnelli D, Segmehl J, Chen S, Wu B, Krumova M, Sturm S. Cracking the structural and morphogenetic basis of tooth biomineralization in snail-crushing cichlid fishes Acta Crystallographica Section a Foundations and Advances. 74: e60-e60. DOI: 10.1107/s2053273318094287  0.2
2017 Kratochwil CF, Sefton MM, Liang Y, Meyer A. Tol2 transposon-mediated transgenesis in the Midas cichlid (Amphilophus citrinellus) - towards understanding gene function and regulatory evolution in an ecological model system for rapid phenotypic diversification. Bmc Developmental Biology. 17: 15. PMID 29169323 DOI: 10.1186/S12861-017-0157-X  0.586
2017 Kratochwil CF, Maheshwari U, Rijli FM. The Long Journey of Pontine Nuclei Neurons: From Rhombic Lip to Cortico-Ponto-Cerebellar Circuitry. Frontiers in Neural Circuits. 11: 33. PMID 28567005 DOI: 10.3389/Fncir.2017.00033  0.655
2017 Renier N, Dominici C, Erzurumlu RS, Kratochwil CF, Rijli FM, Gaspar P, Chédotal A. A mutant with bilateral whisker to barrel inputs unveils somatosensory mapping rules in the cerebral cortex. Elife. 6. PMID 28350297 DOI: 10.7554/Elife.23494  0.703
2017 Renier N, Dominici C, Erzurumlu RS, Kratochwil CF, Rijli FM, Gaspar P, Chédotal A. Author response: A mutant with bilateral whisker to barrel inputs unveils somatosensory mapping rules in the cerebral cortex Elife. DOI: 10.7554/Elife.23494.019  0.608
2015 Bechara A, Laumonnerie C, Vilain N, Kratochwil CF, Cankovic V, Maiorano NA, Kirschmann MA, Ducret S, Rijli FM. Hoxa2 Selects Barrelette Neuron Identity and Connectivity in the Mouse Somatosensory Brainstem. Cell Reports. 13: 783-97. PMID 26489473 DOI: 10.1016/J.Celrep.2015.09.031  0.647
2015 Kratochwil CF, Geissler L, Irisarri I, Meyer A. Molecular Evolution of the Neural Crest Regulatory Network in Ray-Finned Fish. Genome Biology and Evolution. PMID 26475317 DOI: 10.1093/Gbe/Evv200  0.571
2015 Kratochwil CF, Sefton MM, Meyer A. Embryonic and larval development in the Midas cichlid fish species flock (Amphilophus spp.): a new evo-devo model for the investigation of adaptive novelties and species differences. Bmc Developmental Biology. 15: 12. PMID 25887993 DOI: 10.1186/S12861-015-0061-1  0.584
2015 Kratochwil CF, Meyer A. Evolution: tinkering within gene regulatory landscapes. Current Biology : Cb. 25: R285-8. PMID 25829014 DOI: 10.1016/J.Cub.2015.02.051  0.537
2015 Kratochwil CF, Meyer A. Mapping active promoters by ChIP-seq profiling of H3K4me3 in cichlid fish - a first step to uncover cis-regulatory elements in ecological model teleosts. Molecular Ecology Resources. 15: 761-71. PMID 25403420 DOI: 10.1111/1755-0998.12350  0.552
2015 Kratochwil CF, Meyer A. Closing the genotype-phenotype gap: emerging technologies for evolutionary genetics in ecological model vertebrate systems. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 213-26. PMID 25380076 DOI: 10.1002/Bies.201400142  0.586
2014 Kratochwil CF, Rijli FM. The Cre/Lox system to assess the development of the mouse brain. Methods in Molecular Biology (Clifton, N.J.). 1082: 295-313. PMID 24048942 DOI: 10.1007/978-1-62703-655-9_20  0.651
2013 Minoux M, Kratochwil CF, Ducret S, Amin S, Kitazawa T, Kurihara H, Bobola N, Vilain N, Rijli FM. Mouse Hoxa2 mutations provide a model for microtia and auricle duplication. Development (Cambridge, England). 140: 4386-97. PMID 24067355 DOI: 10.1242/Dev.098046  0.639
2013 Di Meglio T, Kratochwil CF, Vilain N, Loche A, Vitobello A, Yonehara K, Hrycaj SM, Roska B, Peters AH, Eichmann A, Wellik D, Ducret S, Rijli FM. Ezh2 orchestrates topographic migration and connectivity of mouse precerebellar neurons. Science (New York, N.Y.). 339: 204-7. PMID 23307742 DOI: 10.1126/Science.1229326  0.718
2010 Kastenhuber E, Kratochwil CF, Ryu S, Schweitzer J, Driever W. Genetic dissection of dopaminergic and noradrenergic contributions to catecholaminergic tracts in early larval zebrafish. The Journal of Comparative Neurology. 518: 439-58. PMID 20017210 DOI: 10.1002/Cne.22214  0.628
2009 Tervonen TA, Louhivuori V, Sun X, Hokkanen ME, Kratochwil CF, Zebryk P, Castrén E, Castrén ML. Aberrant differentiation of glutamatergic cells in neocortex of mouse model for fragile X syndrome. Neurobiology of Disease. 33: 250-9. PMID 19056494 DOI: 10.1016/J.Nbd.2008.10.010  0.405
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