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Damon H. May - Publications

Affiliations: 
2014-2018 Department of Genome Sciences University of Washington, Seattle, Seattle, WA 
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Krayushkina D, Timmins-Schiffman E, Faux J, May DH, Riffle M, Harvey HR, Nunn BL. Growth phase proteomics of the heterotrophic marine bacterium Ruegeria pomeroyi. Scientific Data. 6: 303. PMID 31796751 DOI: 10.1038/S41597-019-0308-Y  0.73
2019 Mikan MP, Harvey HR, Timmins-Schiffman E, Riffle M, May DH, Salter I, Noble WS, Nunn BL. Metaproteomics reveal that rapid perturbations in organic matter prioritize functional restructuring over taxonomy in western Arctic Ocean microbiomes. The Isme Journal. PMID 31492961 DOI: 10.1038/S41396-019-0503-Z  0.67
2019 May DH, Tamura K, Noble WS. Detecting modifications in proteomics experiments with Param-Medic. Journal of Proteome Research. PMID 30714740 DOI: 10.1021/Acs.Jproteome.8B00954  0.368
2018 Correnti CE, Gewe MM, Mehlin C, Bandaranayake AD, Johnsen WA, Rupert PB, Brusniak MY, Clarke M, Burke SE, De Van Der Schueren W, Pilat K, Turnbaugh SM, May D, Watson A, Chan MK, et al. Screening, large-scale production and structure-based classification of cystine-dense peptides. Nature Structural & Molecular Biology. PMID 29483648 DOI: 10.1038/S41594-018-0033-9  0.344
2018 Blank C, Easterly C, Gruening B, Johnson J, Kolmeder CA, Kumar P, May D, Mehta S, Mesuere B, Brown Z, Elias JE, Hervey WJ, McGowan T, Muth T, Nunn B, et al. Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework. Proteomes. 6. PMID 29385081 DOI: 10.3390/Proteomes6010007  0.662
2017 Riffle M, May DH, Timmins-Schiffman E, Mikan MP, Jaschob D, Noble WS, Nunn BL. MetaGOmics: A Web-Based Tool for Peptide-Centric Functional and Taxonomic Analysis of Metaproteomics Data. Proteomes. 6. PMID 29280960 DOI: 10.3390/Proteomes6010002  0.691
2017 May DH, Tamura K, Noble WS. Param-Medic: a Tool for Improving MS/MS Database Search Yield by Optimizing Parameter Settings. Journal of Proteome Research. PMID 28263070 DOI: 10.1021/Acs.Jproteome.7B00028  0.342
2016 Timmins-Schiffman E, May DH, Mikan M, Riffle M, Frazar C, Harvey HR, Noble WS, Nunn BL. Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns. The Isme Journal. PMID 27824341 DOI: 10.1038/Ismej.2016.132  0.652
2016 May DH, Timmins-Schiffman E, Mikan MP, Harvey HR, Borenstein E, Nunn BL, Noble WS. An alignment-free 'metapeptide' strategy for metaproteomic characterization of microbiome samples using shotgun metagenomic sequencing. Journal of Proteome Research. PMID 27396978 DOI: 10.1021/Acs.Jproteome.6B00239  0.671
2015 Chen R, Dawson DW, Pan S, Ottenhof NA, de Wilde RF, Wolfgang CL, May DH, Crispin DA, Lai LA, Lay AR, Waghray M, Wang S, McIntosh MW, Simeone DM, Maitra A, et al. Proteins associated with pancreatic cancer survival in patients with resectable pancreatic ductal adenocarcinoma. Laboratory Investigation; a Journal of Technical Methods and Pathology. 95: 43-55. PMID 25347153 DOI: 10.1038/Labinvest.2014.128  0.309
2014 Pan S, Chen R, Tamura Y, Crispin DA, Lai LA, May DH, McIntosh MW, Goodlett DR, Brentnall TA. Quantitative glycoproteomics analysis reveals changes in N-glycosylation level associated with pancreatic ductal adenocarcinoma. Journal of Proteome Research. 13: 1293-306. PMID 24471499 DOI: 10.1021/Pr4010184  0.503
2013 Herbrich SM, Cole RN, West KP, Schulze K, Yager JD, Groopman JD, Christian P, Wu L, O'Meally RN, May DH, McIntosh MW, Ruczinski I. Statistical inference from multiple iTRAQ experiments without using common reference standards. Journal of Proteome Research. 12: 594-604. PMID 23270375 DOI: 10.1021/Pr300624G  0.391
2012 Pan S, Tamura Y, Chen R, May D, McIntosh MW, Brentnall TA. Large-scale quantitative glycoproteomics analysis of site-specific glycosylation occupancy. Molecular Biosystems. 8: 2850-6. PMID 22892896 DOI: 10.1039/C2Mb25268F  0.309
2011 Pan S, Chen R, Crispin DA, May D, Stevens T, McIntosh MW, Bronner MP, Ziogas A, Anton-Culver H, Brentnall TA. Protein alterations associated with pancreatic cancer and chronic pancreatitis found in human plasma using global quantitative proteomics profiling. Journal of Proteome Research. 10: 2359-76. PMID 21443201 DOI: 10.1021/Pr101148R  0.358
2011 May D, Pan S, Crispin DA, Lai K, Bronner MP, Hogan J, Hockenbery DM, McIntosh M, Brentnall TA, Chen R. Investigating neoplastic progression of ulcerative colitis with label-free comparative proteomics. Journal of Proteome Research. 10: 200-9. PMID 20828217 DOI: 10.1021/Pr100574P  0.364
2011 Pan S, Chen R, Crispin DA, May D, McIntosh M, Anton-Culver H, Cao B, Stevens TK, Bronner MP, Brentnall TA. Abstract 5106: Development of plasma biomarkers for pancreatic cancer diagnosis Cancer Research. 71: 5106-5106. DOI: 10.1158/1538-7445.Am2011-5106  0.325
2011 Pan S, Crispin D, May D, Bronner MP, Lai LA, Hockenbery DM, McIntosh M, Brentnall TA, Chen R. Abstract 5072: Protein signatures associated with dysplasia of ulcerative colitis Cancer Research. 71: 5072-5072. DOI: 10.1158/1538-7445.Am2011-5072  0.362
2010 Pan S, Brentnall TA, Crispin DA, Bronner MP, Lai LA, May D, McIntosh M, Rabinovitch PS, Chen R. Abstract 4562: Alteration of mitochondrial proteome in neoplastic progression of ulcerative colitis Cancer Research. 70: 4562-4562. DOI: 10.1158/1538-7445.Am10-4562  0.344
2009 Reimel BA, Pan S, May DH, Shaffer SA, Goodlett DR, McIntosh MW, Yerian LM, Bronner MP, Chen R, Brentnall TA. Proteomics on Fixed Tissue Specimens - A Review. Current Proteomics. 6: 63-69. PMID 19829741 DOI: 10.2174/157016409787847420  0.539
2009 May D, Law W, Fitzgibbon M, Fang Q, McIntosh M. Software platform for rapidly creating computational tools for mass spectrometry-based proteomics. Journal of Proteome Research. 8: 3212-7. PMID 19309175 DOI: 10.1021/Pr900169W  0.319
2009 Fang Q, Strand A, Law W, Faca VM, Fitzgibbon MP, Hamel N, Houle B, Liu X, May DH, Poschmann G, Roy L, Stühler K, Ying W, Zhang J, Zheng Z, et al. Brain-specific proteins decline in the cerebrospinal fluid of humans with Huntington disease. Molecular & Cellular Proteomics : McP. 8: 451-66. PMID 18984577 DOI: 10.1074/Mcp.M800231-Mcp200  0.337
2008 May D, Liu Y, Law W, Fitzgibbon M, Wang H, Hanash S, McIntosh M. Peptide sequence confidence in accurate mass and time analysis and its use in complex proteomics experiments. Journal of Proteome Research. 7: 5148-56. PMID 19367719 DOI: 10.1021/Pr8004502  0.42
2008 Martin DB, Holzman T, May D, Peterson A, Eastham A, Eng J, McIntosh M. MRMer, an interactive open source and cross-platform system for data extraction and visualization of multiple reaction monitoring experiments. Molecular & Cellular Proteomics : McP. 7: 2270-8. PMID 18641041 DOI: 10.1074/Mcp.M700504-Mcp200  0.338
2008 Fitzgibbon M, Law W, May D, Detter A, McIntosh M. Open-source platform for the analysis of liquid chromatography-mass spectrometry (LC-MS) data. Methods in Molecular Biology (Clifton, N.J.). 428: 369-82. PMID 18287783 DOI: 10.1007/978-1-59745-117-8_19  0.347
2007 May D, Fitzgibbon M, Liu Y, Holzman T, Eng J, Kemp CJ, Whiteaker J, Paulovich A, McIntosh M. A platform for accurate mass and time analyses of mass spectrometry data. Journal of Proteome Research. 6: 2685-94. PMID 17559252 DOI: 10.1021/Pr070146Y  0.305
2006 Bellew M, Coram M, Fitzgibbon M, Igra M, Randolph T, Wang P, May D, Eng J, Fang R, Lin C, Chen J, Goodlett D, Whiteaker J, Paulovich A, McIntosh M. A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS. Bioinformatics (Oxford, England). 22: 1902-9. PMID 16766559 DOI: 10.1093/Bioinformatics/Btl276  0.348
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