Stacy L. Harmer - Publications

Affiliations: 
Plant Biology University of California, Davis, Davis, CA 

34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Creux NM, Brown EA, Garner AG, Saeed S, Scher CL, Holalu SV, Yang D, Maloof JN, Blackman BK, Harmer SL. Flower orientation influences floral temperature, pollinator visits, and plant fitness. The New Phytologist. PMID 34318484 DOI: 10.1111/nph.17627  0.312
2019 Jones MA, Morohashi K, Grotewold E, Harmer SL. Arabidopsis JMJD5/JMJ30 Acts Independently of LUX ARRHYTHMO Within the Plant Circadian Clock to Enable Temperature Compensation. Frontiers in Plant Science. 10: 57. PMID 30774641 DOI: 10.3389/Fpls.2019.00057  0.394
2018 Shalit-Kaneh A, Kumimoto RW, Filkov V, Harmer SL. Multiple feedback loops of the Arabidopsis circadian clock provide rhythmic robustness across environmental conditions. Proceedings of the National Academy of Sciences of the United States of America. PMID 29915068 DOI: 10.1073/Pnas.1805524115  0.514
2017 Rubin MJ, Brock MT, Davis AM, German ZM, Knapp M, Welch SM, Harmer SL, Maloof JN, Davis SJ, Weinig C. Circadian rhythms vary over the growing season and correlate with fitness components. Molecular Ecology. PMID 28792639 DOI: 10.1111/Mec.14287  0.373
2017 Gray JA, Shalit-Kaneh A, Chu DN, Hsu PY, Harmer S. The REVEILLE clock genes inhibit growth of juvenile and adult plants by control of cell size. Plant Physiology. PMID 28254761 DOI: 10.1104/pp.17.00109  0.461
2016 Müller-Moulé P, Nozue K, Pytlak ML, Palmer CM, Covington MF, Wallace AD, Harmer SL, Maloof JN. YUCCA auxin biosynthetic genes are required for Arabidopsis shade avoidance. Peerj. 4: e2574. PMID 27761349 DOI: 10.7717/Peerj.2574  0.377
2016 Atamian HS, Creux NM, Brown EA, Garner AG, Blackman BK, Harmer SL. Circadian regulation of sunflower heliotropism, floral orientation, and pollinator visits. Science (New York, N.Y.). 353: 587-90. PMID 27493185 DOI: 10.1126/Science.Aaf9793  0.364
2016 Atamian HS, Harmer SL. Circadian regulation of hormone signaling and plant physiology. Plant Molecular Biology. PMID 27061301 DOI: 10.1007/S11103-016-0477-4  0.48
2015 Jones MA, Hu W, Litthauer S, Lagarias JC, Harmer SL. A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light. Plant Physiology. 169: 814-25. PMID 26157113 DOI: 10.1104/Pp.15.00782  0.455
2014 Vandenbrink JP, Brown EA, Harmer SL, Blackman BK. Turning heads: the biology of solar tracking in sunflower. Plant Science : An International Journal of Experimental Plant Biology. 224: 20-6. PMID 24908502 DOI: 10.1016/J.Plantsci.2014.04.006  0.332
2014 Hsu PY, Harmer SL. Global profiling of the circadian transcriptome using microarrays. Methods in Molecular Biology (Clifton, N.J.). 1158: 45-56. PMID 24792043 DOI: 10.1007/978-1-4939-0700-7_3  0.302
2014 Hsu PY, Harmer SL. Wheels within wheels: the plant circadian system. Trends in Plant Science. 19: 240-9. PMID 24373845 DOI: 10.1016/j.tplants.2013.11.007  0.442
2013 Hsu PY, Devisetty UK, Harmer SL. Accurate timekeeping is controlled by a cycling activator in Arabidopsis. Elife. 2: e00473. PMID 23638299 DOI: 10.7554/eLife.00473  0.38
2013 Hu W, Franklin KA, Sharrock RA, Jones MA, Harmer SL, Lagarias JC. Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis Proceedings of the National Academy of Sciences of the United States of America. 110: 1542-1547. PMID 23302690 DOI: 10.1073/Pnas.1221738110  0.456
2012 Hsu PY, Harmer SL. Circadian phase has profound effects on differential expression analysis. Plos One. 7: e49853. PMID 23185460 DOI: 10.1371/journal.pone.0049853  0.352
2012 Jones MA, Williams BA, McNicol J, Simpson CG, Brown JW, Harmer SL. Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects. The Plant Cell. 24: 4066-82. PMID 23110899 DOI: 10.1105/Tpc.112.104828  0.45
2011 Rawat R, Takahashi N, Hsu PY, Jones MA, Schwartz J, Salemi MR, Phinney BS, Harmer SL. REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock. Plos Genetics. 7: e1001350. PMID 21483796 DOI: 10.1371/Journal.Pgen.1001350  0.474
2011 Nozue K, Harmer SL, Maloof JN. Genomic analysis of circadian clock-, light-, and growth-correlated genes reveals PHYTOCHROME-INTERACTING FACTOR5 as a modulator of auxin signaling in Arabidopsis. Plant Physiology. 156: 357-72. PMID 21430186 DOI: 10.1104/pp.111.172684  0.429
2011 Kerwin RE, Jimenez-Gomez JM, Fulop D, Harmer SL, Maloof JN, Kliebenstein DJ. Network quantitative trait loci mapping of circadian clock outputs identifies metabolic pathway-to-clock linkages in Arabidopsis. The Plant Cell. 23: 471-85. PMID 21343415 DOI: 10.1105/Tpc.110.082065  0.369
2011 Ellison CT, Vandenbussche F, Van Der Straeten D, Harmer SL. XAP5 CIRCADIAN TIMEKEEPER regulates ethylene responses in aerial tissues of Arabidopsis. Plant Physiology. 155: 988-99. PMID 21163961 DOI: 10.1104/Pp.110.164277  0.6
2010 Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL. Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. Proceedings of the National Academy of Sciences of the United States of America. 107: 21623-8. PMID 21115819 DOI: 10.1073/Pnas.1014204108  0.47
2009 Rawat R, Schwartz J, Jones MA, Sairanen I, Cheng Y, Andersson CR, Zhao Y, Ljung K, Harmer SL. REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways. Proceedings of the National Academy of Sciences of the United States of America. 106: 16883-8. PMID 19805390 DOI: 10.1073/Pnas.0813035106  0.453
2009 Harmer SL. The circadian system in higher plants. Annual Review of Plant Biology. 60: 357-77. PMID 19575587 DOI: 10.1146/annurev.arplant.043008.092054  0.497
2008 Covington MF, Maloof JN, Straume M, Kay SA, Harmer SL. Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biology. 9: R130. PMID 18710561 DOI: 10.1186/Gb-2008-9-8-R130  0.515
2008 Martin-Tryon EL, Harmer SL. XAP5 CIRCADIAN TIMEKEEPER coordinates light signals for proper timing of photomorphogenesis and the circadian clock in Arabidopsis. The Plant Cell. 20: 1244-59. PMID 18515502 DOI: 10.1105/tpc.107.056655  0.672
2007 Covington MF, Harmer SL. The circadian clock regulates auxin signaling and responses in Arabidopsis. Plos Biology. 5: e222. PMID 17683202 DOI: 10.1371/Journal.Pbio.0050222  0.516
2007 Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, Maloof JN. Rhythmic growth explained by coincidence between internal and external cues. Nature. 448: 358-61. PMID 17589502 DOI: 10.1038/Nature05946  0.504
2007 Oliverio KA, Crepy M, Martin-Tryon EL, Milich R, Harmer SL, Putterill J, Yanovsky MJ, Casal JJ. GIGANTEA regulates phytochrome A-mediated photomorphogenesis independently of its role in the circadian clock. Plant Physiology. 144: 495-502. PMID 17384162 DOI: 10.1104/pp.107.097048  0.585
2007 Martin-Tryon EL, Kreps JA, Harmer SL. GIGANTEA acts in blue light signaling and has biochemically separable roles in circadian clock and flowering time regulation. Plant Physiology. 143: 473-86. PMID 17098855 DOI: 10.1104/pp.106.088757  0.57
2005 Harmer SL, Kay SA. Positive and negative factors confer phase-specific circadian regulation of transcription in Arabidopsis. The Plant Cell. 17: 1926-40. PMID 15923346 DOI: 10.1105/Tpc.105.033035  0.422
2005 Farré EM, Harmer SL, Harmon FG, Yanovsky MJ, Kay SA. Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock. Current Biology : Cb. 15: 47-54. PMID 15649364 DOI: 10.1016/J.Cub.2004.12.067  0.503
2002 Alabadí D, Yanovsky MJ, Más P, Harmer SL, Kay SA. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Current Biology : Cb. 12: 757-61. PMID 12007421 DOI: 10.1016/S0960-9822(02)00815-1  0.614
2001 Harmer SL, Panda S, Kay SA. Molecular bases of circadian rhythms. Annual Review of Cell and Developmental Biology. 17: 215-53. PMID 11687489 DOI: 10.1146/Annurev.Cellbio.17.1.215  0.406
2000 Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, Kay SA. Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science (New York, N.Y.). 290: 2110-3. PMID 11118138 DOI: 10.1126/Science.290.5499.2110  0.442
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