| Year |
Citation |
Score |
| 2014 |
Zimmermann P, Bleuler S, Laule O, Martin F, Ivanov NV, Campanoni P, Oishi K, Lugon-Moulin N, Wyss M, Hruz T, Gruissem W. ExpressionData - A public resource of high quality curated datasets representing gene expression across anatomy, development and experimental conditions. Biodata Mining. 7: 18. PMID 25228922 DOI: 10.1186/1756-0381-7-18 |
0.594 |
|
| 2014 |
Hiss M, Laule O, Meskauskiene RM, Arif MA, Decker EL, Erxleben A, Frank W, Hanke ST, Lang D, Martin A, Neu C, Reski R, Richardt S, Schallenberg-Rüdinger M, Szövényi P, ... ... Zimmermann P, et al. Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions. The Plant Journal : For Cell and Molecular Biology. 79: 530-9. PMID 24889180 DOI: 10.1111/tpj.12572 |
0.399 |
|
| 2013 |
Prasad A, Kumar SS, Dessimoz C, Bleuler S, Laule O, Hruz T, Gruissem W, Zimmermann P. Global regulatory architecture of human, mouse and rat tissue transcriptomes. Bmc Genomics. 14: 716. PMID 24138449 DOI: 10.1186/1471-2164-14-716 |
0.46 |
|
| 2013 |
Meskauskiene R, Laule O, Ivanov NV, Martin F, Wyss M, Gruissem W, Zimmermann P. Controlled vocabularies for plant anatomical parts optimized for use in data analysis tools and for cross-species studies. Plant Methods. 9: 33. PMID 23958387 DOI: 10.1186/1746-4811-9-33 |
0.5 |
|
| 2013 |
Poraty-Gavra L, Zimmermann P, Haigis S, Bednarek P, Hazak O, Stelmakh OR, Sadot E, Schulze-Lefert P, Gruissem W, Yalovsky S. The Arabidopsis Rho of plants GTPase AtROP6 functions in developmental and pathogen response pathways. Plant Physiology. 161: 1172-88. PMID 23319551 DOI: 10.1104/Pp.112.213165 |
0.486 |
|
| 2012 |
Beleut M, Zimmermann P, Baudis M, Bruni N, Bühlmann P, Laule O, Luu VD, Gruissem W, Schraml P, Moch H. Integrative genome-wide expression profiling identifies three distinct molecular subgroups of renal cell carcinoma with different patient outcome. Bmc Cancer. 12: 310. PMID 22824167 DOI: 10.1186/1471-2407-12-310 |
0.468 |
|
| 2011 |
Hruz T, Wyss M, Docquier M, Pfaffl MW, Masanetz S, Borghi L, Verbrugghe P, Kalaydjieva L, Bleuler S, Laule O, Descombes P, Gruissem W, Zimmermann P. RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization. Bmc Genomics. 12: 156. PMID 21418615 DOI: 10.1186/1471-2164-12-156 |
0.559 |
|
| 2010 |
Baginsky S, Hennig L, Zimmermann P, Gruissem W. Gene expression analysis, proteomics, and network discovery. Plant Physiology. 152: 402-10. PMID 20018595 DOI: 10.1104/Pp.109.150433 |
0.668 |
|
| 2008 |
Hruz T, Laule O, Szabo G, Wessendorp F, Bleuler S, Oertle L, Widmayer P, Gruissem W, Zimmermann P. Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes. Advances in Bioinformatics. 2008: 420747. PMID 19956698 DOI: 10.1155/2008/420747 |
0.609 |
|
| 2008 |
Zimmermann P, Laule O, Schmitz J, Hruz T, Bleuler S, Gruissem W. Genevestigator transcriptome meta-analysis and biomarker search using rice and barley gene expression databases. Molecular Plant. 1: 851-7. PMID 19825587 DOI: 10.1093/Mp/Ssn048 |
0.626 |
|
| 2008 |
Baerenfaller K, Grossmann J, Grobei MA, Hull R, Hirsch-Hoffmann M, Yalovsky S, Zimmermann P, Grossniklaus U, Gruissem W, Baginsky S. Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science (New York, N.Y.). 320: 938-41. PMID 18436743 DOI: 10.1126/Science.1157956 |
0.595 |
|
| 2007 |
Schöner D, Barkow S, Bleuler S, Wille A, Zimmermann P, Bühlmann P, Gruissem W, Zitzler E. Network analysis of systems elements. Exs. 97: 331-51. PMID 17432274 |
0.597 |
|
| 2006 |
Laule O, Hirsch-Hoffmann M, Hruz T, Gruissem W, Zimmermann P. Web-based analysis of the mouse transcriptome using Genevestigator. Bmc Bioinformatics. 7: 311. PMID 16790046 DOI: 10.1186/1471-2105-7-311 |
0.565 |
|
| 2006 |
Preli? A, Bleuler S, Zimmermann P, Wille A, Bühlmann P, Gruissem W, Hennig L, Thiele L, Zitzler E. A systematic comparison and evaluation of biclustering methods for gene expression data. Bioinformatics (Oxford, England). 22: 1122-9. PMID 16500941 DOI: 10.1093/Bioinformatics/Btl060 |
0.567 |
|
| 2006 |
Zimmermann P, Schildknecht B, Craigon D, Garcia-Hernandez M, Gruissem W, May S, Mukherjee G, Parkinson H, Rhee S, Wagner U, Hennig L. MIAME/Plant - adding value to plant microarrray experiments. Plant Methods. 2: 1. PMID 16401339 DOI: 10.1186/1746-4811-2-1 |
0.561 |
|
| 2005 |
Vanderauwera S, Zimmermann P, Rombauts S, Vandenabeele S, Langebartels C, Gruissem W, Inzé D, Van Breusegem F. Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis Plant Physiology. 139: 806-821. PMID 16183842 DOI: 10.1104/Pp.105.065896 |
0.576 |
|
| 2005 |
Zimmermann P, Hennig L, Gruissem W. Gene-expression analysis and network discovery using Genevestigator Trends in Plant Science. 10: 407-409. PMID 16081312 DOI: 10.1016/J.Tplants.2005.07.003 |
0.588 |
|
| 2004 |
Wille A, Zimmermann P, Vranová E, Fürholz A, Laule O, Bleuler S, Hennig L, Prelic A, von Rohr P, Thiele L, Zitzler E, Gruissem W, Bühlmann P. Sparse graphical Gaussian modeling of the isoprenoid gene network in Arabidopsis thaliana. Genome Biology. 5: R92. PMID 15535868 DOI: 10.1186/Gb-2004-5-11-R92 |
0.535 |
|
| 2004 |
Zimmermann P, Hirsch-Hoffmann M, Hennig L, Gruissem W. GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox Plant Physiology. 136: 2621-2632. PMID 15375207 DOI: 10.1104/Pp.104.046367 |
0.622 |
|
| 2004 |
Rausch C, Zimmermann P, Amrhein N, Bucher M. Expression analysis suggests novel roles for the plastidic phosphate transporter Pht2;1 in auto- and heterotrophic tissues in potato and Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 39: 13-28. PMID 15200639 DOI: 10.1111/j.1365-313X.2004.02106.x |
0.409 |
|
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