| Year |
Citation |
Score |
| 2021 |
Greco JA, Wagner NL, Jensen RJ, Lawrence DB, Ranaghan MJ, Sandberg MN, Sandberg DJ, Birge RR. Activation of retinal ganglion cells using a biomimetic artificial retina. Journal of Neural Engineering. PMID 34768254 DOI: 10.1088/1741-2552/ac395c |
0.709 |
|
| 2018 |
Guberman-Pfeffer MJ, Greco JA, Birge RR, Frank HA, Gascón JA. Light Harvesting by Equally Contributing Mechanisms in a Photosynthetic Antenna Protein. The Journal of Physical Chemistry Letters. PMID 29337581 DOI: 10.1021/Acs.Jpclett.7B03211 |
0.399 |
|
| 2018 |
Wax TJ, Greco JA, Chen S, Wagner NL, Zhao J, Birge RR. Tunable photocycle kinetics of a hybrid bacteriorhodopsin/quantum dot system Nano Research. 12: 365-373. DOI: 10.1007/S12274-018-2224-4 |
0.3 |
|
| 2017 |
Greco JA, Wagner NL, Frank HA, Birge RR. The Forbidden 11Bu- Excited Singlet State in Peridinin and Peridinin Analogues. The Journal of Physical Chemistry. A. PMID 29202230 DOI: 10.1021/Acs.Jpca.7B10001 |
0.374 |
|
| 2017 |
Trieu MM, Devine EL, Lamarche LB, Ammerman AE, Greco JA, Birge RR, Theobald DL, Oprian DD. Expression, Purification, and Spectral Tuning of RhoGC, a Retinylidene/Guanylyl Cyclase Fusion Protein and Optogenetics Tool from the Aquatic Fungus Blastocladiella emersonii. The Journal of Biological Chemistry. PMID 28473465 DOI: 10.1074/Jbc.M117.789636 |
0.668 |
|
| 2016 |
Guberman-Pfeffer MJ, Greco JA, Samankumara LP, Zeller M, Birge RR, Gascón JA, Brückner C. Bacteriochlorins with a Twist: Discovery of a Unique Mechanism to Red-Shift the Optical Spectra of Bacteriochlorins. Journal of the American Chemical Society. PMID 27997161 DOI: 10.1021/Jacs.6B12419 |
0.397 |
|
| 2016 |
Greco JA, LaFountain AM, Kinashi N, Shinada T, Sakaguchi K, Katsumura S, Magdaong NC, Niedzwiedzki DM, Birge RR, Frank HA. Spectroscopic Investigation of the Carotenoid Deoxyperidinin: Direct Observation of the Forbidden S0 → S1 Transition. The Journal of Physical Chemistry. B. PMID 26907520 DOI: 10.1021/Acs.Jpcb.6B00439 |
0.384 |
|
| 2016 |
Kang HS, Esemoto NN, Diers JR, Niedzwiedzki DM, Greco JA, Akhigbe J, Yu Z, Pancholi C, Viswanathan Bhagavathy G, Nguyen JK, Kirmaier C, Birge RR, Ptaszek M, Holten D, Bocian DF. Effects of Strong Electronic Coupling in Chlorin and Bacteriochlorin Dyads. The Journal of Physical Chemistry. A. PMID 26765839 DOI: 10.1021/Acs.Jpca.5B10686 |
0.412 |
|
| 2016 |
Adamec F, Greco JA, Lafountain AM, Magdaong NM, Fuciman M, Birge RR, Polívka T, Frank HA. Spectroscopic investigation of a brightly colored psittacofulvin pigment from parrot feathers Chemical Physics Letters. 648: 195-199. DOI: 10.1016/J.Cplett.2016.02.029 |
0.353 |
|
| 2015 |
Greco JA, Shima S, Wagner NL, McCarthy JR, Atticks K, Brückner C, Birge RR. Two-photon spectroscopy of the Q-bands of meso -tetraphenyl-porphyrin and -chlorin framework derivatives Journal of Physical Chemistry C. 119: 3711-3724. DOI: 10.1021/Jp5117883 |
0.366 |
|
| 2014 |
Sandberg MN, Greco JA, Wagner NL, Amora TL, Ramos LA, Chen MH, Knox BE, Birge RR. Low-Temperature Trapping of Photointermediates of the Rhodopsin E181Q Mutant. Soj Biochemistry. 1. PMID 25621306 |
0.793 |
|
| 2014 |
Magdaong NM, LaFountain AM, Greco JA, Gardiner AT, Carey AM, Cogdell RJ, Gibson GN, Birge RR, Frank HA. High efficiency light harvesting by carotenoids in the LH2 complex from photosynthetic bacteria: unique adaptation to growth under low-light conditions. The Journal of Physical Chemistry. B. 118: 11172-89. PMID 25171303 DOI: 10.1021/Jp5070984 |
0.314 |
|
| 2014 |
Magdaong NM, Niedzwiedzki DM, Greco JA, Liu H, Yano K, Kajikawa T, Sakaguchi K, Katsumura S, Birge RR, Frank HA. Excited state properties of a short π-electron conjugated peridinin analogue. Chemical Physics Letters. 593: 132-139. PMID 24678069 DOI: 10.1016/J.Cplett.2014.01.002 |
0.339 |
|
| 2014 |
Ranaghan MJ, Greco JA, Wagner NL, Grewal R, Rangarajan R, Koscielecki JF, Wise KJ, Birge RR. Photochromic bacteriorhodopsin mutant with high holographic efficiency and enhanced stability via a putative self-repair mechanism. Acs Applied Materials & Interfaces. 6: 2799-808. PMID 24498928 DOI: 10.1021/Am405363Z |
0.783 |
|
| 2014 |
Greco JA, Rossi A, Birge RR, Brückner C. A spectroscopic and theoretical investigation of a free-base meso-trithienylcorrole. Photochemistry and Photobiology. 90: 402-14. PMID 24303811 DOI: 10.1111/Php.12203 |
0.418 |
|
| 2013 |
Kuemmel CM, Sandberg MN, Birge RR, Knox BE. A conserved aromatic residue regulating photosensitivity in short-wavelength sensitive cone visual pigments. Biochemistry. 52: 5084-91. PMID 23808485 DOI: 10.1021/Bi400490G |
0.358 |
|
| 2013 |
Wagner NL, Greco JA, Ranaghan MJ, Birge RR. Directed evolution of bacteriorhodopsin for applications in bioelectronics. Journal of the Royal Society, Interface / the Royal Society. 10: 20130197. PMID 23676894 DOI: 10.1098/Rsif.2013.0197 |
0.742 |
|
| 2013 |
Wagner NL, Greco JA, Enriquez MM, Frank HA, Birge RR. The nature of the intramolecular charge transfer state in peridinin. Biophysical Journal. 104: 1314-25. PMID 23528091 DOI: 10.1016/J.Bpj.2013.01.045 |
0.363 |
|
| 2013 |
Christensen RL, Enriquez MM, Wagner NL, Peacock-Villada AY, Scriban C, Schrock RR, Polívka T, Frank HA, Birge RR. Energetics and dynamics of the low-lying electronic states of constrained polyenes: implications for infinite polyenes. The Journal of Physical Chemistry. A. 117: 1449-65. PMID 23330819 DOI: 10.1021/Jp310592S |
0.369 |
|
| 2013 |
George DK, Knab JR, He Y, Kumauchi M, Birge RR, Hoff WD, Markelz AG. Photoactive yellow protein terahertz response: Hydration, heating and intermediate states Ieee Transactions On Terahertz Science and Technology. 3: 288-294. DOI: 10.1109/Tthz.2013.2256233 |
0.364 |
|
| 2012 |
Enriquez MM, Hananoki S, Hasegawa S, Kajikawa T, Katsumura S, Wagner NL, Birge RR, Frank HA. Effect of Molecular Symmetry on the Spectra and Dynamics of the Intramolecular Charge Transfer (ICT) state of peridinin. The Journal of Physical Chemistry. B. 116: 10748-56. PMID 22889055 DOI: 10.1021/Jp305804Q |
0.394 |
|
| 2012 |
Brückner C, Ogikubo J, McCarthy JR, Akhigbe J, Hyland MA, Daddario P, Worlinsky JL, Zeller M, Engle JT, Ziegler CJ, Ranaghan MJ, Sandberg MN, Birge RR. meso-arylporpholactones and their reduction products. The Journal of Organic Chemistry. 77: 6480-94. PMID 22734444 DOI: 10.1021/Jo300963M |
0.756 |
|
| 2012 |
Chen MH, Kuemmel C, Birge RR, Knox BE. Rapid release of retinal from a cone visual pigment following photoactivation. Biochemistry. 51: 4117-25. PMID 22217337 DOI: 10.1021/Bi201522H |
0.349 |
|
| 2012 |
Ranaghan MJ, Wagner NL, Sandberg MN, Birge RR. Optical applications of biomolecules Optical Biomimetics: Materials and Applications. 20-78. DOI: 10.1016/B978-1-84569-802-7.50002-0 |
0.697 |
|
| 2012 |
Greco JA, Wagner NL, Ranaghan MJ, Rajasekaran S, Birge RR. Biomolecular Electronics and Protein-Based Optical Computing Biomolecular Information Processing: From Logic Systems to Smart Sensors and Actuators. 33-59. DOI: 10.1002/9783527645480.ch3 |
0.715 |
|
| 2011 |
Ranaghan MJ, Schwall CT, Alder NN, Birge RR. Green proteorhodopsin reconstituted into nanoscale phospholipid bilayers (nanodiscs) as photoactive monomers. Journal of the American Chemical Society. 133: 18318-27. PMID 21951206 DOI: 10.1021/Ja2070957 |
0.766 |
|
| 2011 |
Chen MH, Sandberg DJ, Babu KR, Bubis J, Surya A, Ramos LS, Zapata HJ, Galan JF, Sandberg MN, Birge RR, Knox BE. Conserved residues in the extracellular loops of short-wavelength cone visual pigments. Biochemistry. 50: 6763-73. PMID 21688771 DOI: 10.1021/Bi101557M |
0.785 |
|
| 2011 |
Kusumoto T, Kosumi D, Uragami C, Frank HA, Birge RR, Cogdell RJ, Hashimoto H. Femtosecond transient absorption spectroscopic study of a carbonyl-containing carotenoid analogue, 2-(all-trans-retinylidene)-indan-1,3-dione. The Journal of Physical Chemistry. A. 115: 2110-9. PMID 21361262 DOI: 10.1021/Jp111313F |
0.392 |
|
| 2011 |
Sandberg MN, Amora TL, Ramos LS, Chen MH, Knox BE, Birge RR. Glutamic acid 181 is negatively charged in the bathorhodopsin photointermediate of visual rhodopsin. Journal of the American Chemical Society. 133: 2808-11. PMID 21319741 DOI: 10.1021/Ja1094183 |
0.785 |
|
| 2010 |
Ranaghan MJ, Shima S, Ramos L, Poulin DS, Whited G, Rajasekaran S, Stuart JA, Albert AD, Birge RR. Photochemical and thermal stability of green and blue proteorhodopsins: implications for protein-based bioelectronic devices. The Journal of Physical Chemistry. B. 114: 14064-70. PMID 20964279 DOI: 10.1021/Jp106633W |
0.747 |
|
| 2010 |
Enriquez MM, Fuciman M, LaFountain AM, Wagner NL, Birge RR, Frank HA. The intramolecular charge transfer state in carbonyl-containing polyenes and carotenoids. The Journal of Physical Chemistry. B. 114: 12416-26. PMID 20825184 DOI: 10.1021/Jp106113H |
0.401 |
|
| 2010 |
Kirmaier C, Song HE, Yang E, Schwartz JK, Hindin E, Diers JR, Loewe RS, Tomizaki KY, Chevalier F, Ramos L, Birge RR, Lindsey JS, Bocian DF, Holten D. Excited-state photodynamics of perylene-porphyrin dyads. 5. Tuning light-harvesting characteristics via perylene substituents, connection motif, and three-dimensional architecture. The Journal of Physical Chemistry. B. 114: 14249-64. PMID 20112987 DOI: 10.1021/Jp910705Q |
0.695 |
|
| 2010 |
Hudgins M, Butler J, Fernandez R, Gertz FT, Ranaghan MJ, Birge R, Haddon RC, Khizroev S. Photo-response of electrostatically deposited Bacteriorhodopsin monolayer films for protein-based disk recording beyond 10 Tbit/in2 Journal of Nanoelectronics and Optoelectronics. 5: 287-289. DOI: 10.1166/Jno.2010.1111 |
0.76 |
|
| 2009 |
Niedzwiedzki DM, Sandberg DJ, Cong H, Sandberg MN, Gibson GN, Birge RR, Frank HA. Ultrafast Time-resolved Absorption Spectroscopy of Geometric Isomers of Carotenoids. Chemical Physics. 357: 4-16. PMID 20161150 DOI: 10.1016/J.Chemphys.2008.07.011 |
0.405 |
|
| 2009 |
Schulte T, Niedzwiedzki DM, Birge RR, Hiller RG, Polívka T, Hofmann E, Frank HA. Identification of a single peridinin sensing Chl-a excitation in reconstituted PCP by crystallography and spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 106: 20764-9. PMID 19934052 DOI: 10.1073/Pnas.0908938106 |
0.378 |
|
| 2008 |
Premvardhan L, Sandberg DJ, Fey H, Birge RR, Büchel C, van Grondelle R. The charge-transfer properties of the S2 state of fucoxanthin in solution and in fucoxanthin chlorophyll-a/c2 protein (FCP) based on stark spectroscopy and molecular-orbital theory. The Journal of Physical Chemistry. B. 112: 11838-53. PMID 18722413 DOI: 10.1021/jp802689p |
0.754 |
|
| 2008 |
Amora TL, Ramos LS, Galan JF, Birge RR. Spectral tuning of deep red cone pigments. Biochemistry. 47: 4614-20. PMID 18370404 DOI: 10.1021/Bi702069D |
0.772 |
|
| 2008 |
Xi B, Tetley WC, Marcy DL, Zhong C, Whited G, Birge RR, Stuart JA. Evaluation of blue and green absorbing proteorhodopsins as holographic materials. The Journal of Physical Chemistry. B. 112: 2524-32. PMID 18237161 DOI: 10.1021/Jp0740752 |
0.579 |
|
| 2008 |
Hillebrecht JR, Koscielecki JF, Wise KJ, Krebs MP, Stuart JA, Birge RR. Optimizing photoactive proteins for optoelectronic environments by using directed evolution Nanobiotechnology: Bioinspired Devices and Materials of the Future. 121-140. DOI: 10.1007/978-1-59745-218-2_7 |
0.765 |
|
| 2007 |
Rangarajan R, Galan JF, Whited G, Birge RR. Mechanism of spectral tuning in green-absorbing proteorhodopsin. Biochemistry. 46: 12679-86. PMID 17927209 DOI: 10.1021/Bi700955X |
0.791 |
|
| 2007 |
Galinato MG, Niedzwiedzki D, Deal C, Birge RR, Frank HA. Cation radicals of xanthophylls. Photosynthesis Research. 94: 67-78. PMID 17638112 DOI: 10.1007/S11120-007-9218-5 |
0.371 |
|
| 2007 |
Niedzwiedzki D, Koscielecki JF, Cong H, Sullivan JO, Gibson GN, Birge RR, Frank HA. Ultrafast dynamics and excited state spectra of open-chain carotenoids at room and low temperatures. The Journal of Physical Chemistry. B. 111: 5984-98. PMID 17441762 DOI: 10.1021/Jp070500F |
0.803 |
|
| 2007 |
Ramos LS, Chen MH, Knox BE, Birge RR. Regulation of photoactivation in vertebrate short wavelength visual pigments: protonation of the retinylidene Schiff base and a counterion switch. Biochemistry. 46: 5330-40. PMID 17439245 DOI: 10.1021/Bi700138G |
0.716 |
|
| 2006 |
Kusumoto T, Horibe T, Kajikawa T, Hasegawa S, Iwashita T, Cogdell RJ, Birge RR, Frank HA, Katsumura S, Hashimoto H. Stark Absorption Spectroscopy of Peridinin and Allene-Modified Analogues. Chemical Physics. 373: 71-79. PMID 21339887 DOI: 10.1016/J.Chemphys.2010.01.018 |
0.327 |
|
| 2006 |
Ilagan RP, Koscielecki JF, Hiller RG, Sharples FP, Gibson GN, Birge RR, Frank HA. Femtosecond time-resolved absorption spectroscopy of main-form and high-salt peridinin-chlorophyll a-proteins at low temperatures. Biochemistry. 45: 14052-63. PMID 17115700 DOI: 10.1021/Bi061217U |
0.803 |
|
| 2006 |
Niedzwiedzki DM, Sullivan JO, Polívka T, Birge RR, Frank HA. Femtosecond time-resolved transient absorption spectroscopy of xanthophylls. The Journal of Physical Chemistry. B. 110: 22872-85. PMID 17092039 DOI: 10.1021/Jp0622738 |
0.386 |
|
| 2006 |
Prokhorenko VI, Nagy AM, Waschuk SA, Brown LS, Birge RR, Miller RJ. Coherent control of retinal isomerization in bacteriorhodopsin. Science (New York, N.Y.). 313: 1257-61. PMID 16946063 DOI: 10.1126/Science.1130747 |
0.366 |
|
| 2006 |
Brückner C, Foss PC, Sullivan JO, Pelto R, Zeller M, Birge RR, Crundwell G. Origin of the bathochromically shifted optical spectra of meso-tetrathien-2'- and 3'-ylporphyrins as compared to meso-tetraphenylporphyrin. Physical Chemistry Chemical Physics : Pccp. 8: 2402-12. PMID 16710488 DOI: 10.1039/B600010J |
0.355 |
|
| 2006 |
Hillebrecht JR, Galan J, Rangarajan R, Ramos L, McCleary K, Ward DE, Stuart JA, Birge RR. Structure, function, and wavelength selection in blue-absorbing proteorhodopsin. Biochemistry. 45: 1579-90. PMID 16460005 DOI: 10.1021/Bi051851S |
0.803 |
|
| 2006 |
Xi B, Wise KJ, Stuart JA, Birge RR. Bacteriorhodopsin-based 3D optical memory Bionanotechnology: Proteins to Nanodevices. 39-59. DOI: 10.1007/978-1-4020-4375-8_4 |
0.499 |
|
| 2006 |
Wise KJ, Hillebrecht JR, Koscielecki JF, Stuart JA, Birge RR. Optimization of Proteins for Molecular and Biomolecular Electronic Devices Reviews in Cell Biology and Molecular Medicine. DOI: 10.1002/3527600906.Mcb.200400068 |
0.776 |
|
| 2005 |
Kee HL, Kirmaier C, Yu L, Thamyongkit P, Youngblood WJ, Calder ME, Ramos L, Noll BC, Bocian DF, Scheidt WR, Birge RR, Lindsey JS, Holten D. Structural control of the photodynamics of boron-dipyrrin complexes. The Journal of Physical Chemistry. B. 109: 20433-43. PMID 16853644 DOI: 10.1021/Jp0525078 |
0.707 |
|
| 2005 |
Gillespie NB, Ren L, Ramos L, Daniell H, Dews D, Utzat KA, Stuart JA, Buck CH, Birge RR. Characterization and photochemistry of 13-desmethyl bacteriorhodopsin. The Journal of Physical Chemistry. B. 109: 16142-52. PMID 16853051 DOI: 10.1021/Jp052124+ |
0.801 |
|
| 2005 |
Pendon ZD, Sullivan JO, van der Hoef I, Lugtenburg J, Cua A, Bocian DF, Birge RR, Frank HA. Stereoisomers of carotenoids: spectroscopic properties of locked and unlocked cis-isomers of spheroidene. Photosynthesis Research. 86: 5-24. PMID 16172922 DOI: 10.1007/S11120-005-1205-0 |
0.389 |
|
| 2005 |
Hillebrecht JR, Koscielecki JF, Wise KJ, Marcy DL, Tetley W, Rangarajan R, Sullivan J, Brideau M, Krebs MP, Stuart JA, Birge RR. Optimization of protein-based volumetric optical memories and associative processors by using directed evolution Nanobiotechnology. 1: 141-151. DOI: 10.1385/Nbt:1:2:141 |
0.782 |
|
| 2004 |
Hillebrecht JR, Wise KJ, Koscielecki JF, Birge RR. Directed evolution of bacteriorhodopsin for device applications. Methods in Enzymology. 388: 333-47. PMID 15289081 DOI: 10.1016/S0076-6879(04)88026-1 |
0.781 |
|
| 2004 |
Ilagan RP, Shima S, Melkozernov A, Lin S, Blankenship RE, Sharples FP, Hiller RG, Birge RR, Frank HA. Spectroscopic properties of the main-form and high-salt peridinin-chlorophyll a proteins from Amphidinium carterae. Biochemistry. 43: 1478-87. PMID 14769024 DOI: 10.1021/Bi0357964 |
0.388 |
|
| 2004 |
Kusnetzow AK, Dukkipati A, Babu KR, Ramos L, Knox BE, Birge RR. Vertebrate ultraviolet visual pigments: protonation of the retinylidene Schiff base and a counterion switch during photoactivation. Proceedings of the National Academy of Sciences of the United States of America. 101: 941-6. PMID 14732701 DOI: 10.1073/Pnas.0305206101 |
0.802 |
|
| 2004 |
Chen JY, Knab JR, Cerne J, Hillebrecht JR, Birge RR, Markelz AG. Terahertz measurements of the Photoactive Protein Bacteriorhodopsin mutant D96N: M and P states Materials Research Society Symposium Proceedings. 826: 20-26. DOI: 10.1557/Proc-826-V2.6 |
0.343 |
|
| 2004 |
Xu J, Galan J, Ramian G, Savvidis P, Scopatz A, Birge RR, Allen SJ, Plaxco K. Terahertz Circular Dichroism Spectroscopy of Biomolecules Proceedings of Spie - the International Society For Optical Engineering. 5268: 19-26. DOI: 10.1117/12.518533 |
0.763 |
|
| 2003 |
Xu J, Ramian GJ, Galan JF, Savvidis PG, Scopatz AM, Birge RR, Allen SJ, Plaxco KW. Terahertz circular dichroism spectroscopy: a potential approach to the in situ detection of life's metabolic and genetic machinery. Astrobiology. 3: 489-504. PMID 14678660 DOI: 10.1089/153110703322610609 |
0.753 |
|
| 2003 |
Whitmire SE, Wolpert D, Markelz AG, Hillebrecht JR, Galan J, Birge RR. Protein flexibility and conformational state: a comparison of collective vibrational modes of wild-type and D96N bacteriorhodopsin. Biophysical Journal. 85: 1269-77. PMID 12885670 DOI: 10.1016/S0006-3495(03)74562-7 |
0.792 |
|
| 2003 |
Xu J, Stickrath AB, Bhattacharya P, Nees J, Váró G, Hillebrecht JR, Ren L, Birge RR. Direct measurement of the photoelectric response time of bacteriorhodopsin via electro-optic sampling. Biophysical Journal. 85: 1128-34. PMID 12885657 DOI: 10.1016/S0006-3495(03)74549-4 |
0.313 |
|
| 2003 |
Wolak MA, Gillespie NB, Birge RR, Lees WJ. Thermolysis of fluorinated cycloalkylidene fulgides yields a new class of photochromic compounds. Chemical Communications (Cambridge, England). 992-3. PMID 12744335 DOI: 10.1039/B300010A |
0.682 |
|
| 2003 |
Wolak MA, Thomas CJ, Gillespie NB, Birge RR, Lees WJ. Tuning the optical properties of fluorinated indolylfulgimides. The Journal of Organic Chemistry. 68: 319-26. PMID 12530855 DOI: 10.1021/Jo026374N |
0.729 |
|
| 2003 |
Shima S, Ilagan RP, Gillespie N, Sommer BJ, Hiller RG, Sharples FP, Frank HA, Birge RR. Two-photon and fluorescence spectroscopy and the effect of environment on the photochemical properties of peridinin in solution and in the peridinin-chlorophyll-protein from amphidinium carterae Journal of Physical Chemistry A. 107: 8052-8066. DOI: 10.1021/Jp022648Z |
0.75 |
|
| 2003 |
Brückner C, McCarthy JR, Daniell HW, Pendon ZD, Ilagan RP, Francis TM, Ren L, Birge RR, Frank HA. A spectroscopic and computational study of the singlet and triplet excited states of synthetic β-functionalized chlorins Chemical Physics. 294: 285-303. DOI: 10.1016/S0301-0104(03)00282-9 |
0.332 |
|
| 2002 |
Wise KJ, Gillespie NB, Stuart JA, Krebs MP, Birge RR. Optimization of bacteriorhodopsin for bioelectronic devices. Trends in Biotechnology. 20: 387-94. PMID 12175770 DOI: 10.1016/S0167-7799(02)02023-1 |
0.714 |
|
| 2002 |
Dukkipati A, Kusnetzow A, Babu KR, Ramos L, Singh D, Knox BE, Birge RR. Phototransduction by vertebrate ultraviolet visual pigments: protonation of the retinylidene Schiff base following photobleaching. Biochemistry. 41: 9842-51. PMID 12146950 DOI: 10.1021/Bi025883G |
0.801 |
|
| 2002 |
Choi G, Landin J, Galan JF, Birge RR, Albert AD, Yeagle PL. Structural studies of metarhodopsin II, the activated form of the G-protein coupled receptor, rhodopsin. Biochemistry. 41: 7318-24. PMID 12044163 DOI: 10.1021/Bi025507W |
0.758 |
|
| 2002 |
Gillespie NB, Wise KJ, Ren L, Stuart JA, Marcy DL, Hillebrecht J, Li Q, Ramos L, Jordan K, Fyvie S, Birge RR. Characterization of the branched-photocycle intermediates P and Q of bacteriorhodopsin Journal of Physical Chemistry B. 106: 13352-13361. DOI: 10.1021/Jp021221P |
0.792 |
|
| 2002 |
Wolak MA, Gillespie NB, Thomas CJ, Birge RR, Lees WJ. Optical and thermal properties of photochromic fluorinated adamantylidene indolylfulgides Journal of Photochemistry and Photobiology a-Chemistry. 147: 39-44. DOI: 10.1016/S1010-6030(01)00625-6 |
0.718 |
|
| 2002 |
Stuart JA, Marcy DL, Wise KJ, Birge RR. Volumetric optical memory based on bacteriorhodopsin Synthetic Metals. 127: 3-15. DOI: 10.1016/S0379-6779(01)00586-0 |
0.34 |
|
| 2002 |
Wolak MA, Gillespie NB, Thomas CJ, Birge RR, Lees WJ. Optical and thermal properties of photochromic fluorinated adamantylidene indolylfulgides Journal of Photochemistry and Photobiology a: Chemistry. 147: 39-44. |
0.671 |
|
| 2001 |
Dukkipati A, Vought BW, Singh D, Birge RR, Knox BE. Serine 85 in transmembrane helix 2 of short-wavelength visual pigments interacts with the retinylidene Schiff base counterion. Biochemistry. 40: 15098-108. PMID 11735392 DOI: 10.1021/Bi011354L |
0.78 |
|
| 2001 |
Ren L, Martin CH, Wise KJ, Gillespie NB, Luecke H, Lanyi JK, Spudich JL, Birge RR. Molecular mechanism of spectral tuning in sensory rhodopsin II. Biochemistry. 40: 13906-14. PMID 11705380 DOI: 10.1021/Bi0116487 |
0.759 |
|
| 2001 |
Babu KR, Dukkipati A, Birge RR, Knox BE. Regulation of phototransduction in short-wavelength cone visual pigments via the retinylidene Schiff base counterion. Biochemistry. 40: 13760-6. PMID 11705364 DOI: 10.1021/Bi015584B |
0.73 |
|
| 2001 |
Kusnetzow A, Dukkipati A, Babu KR, Singh D, Vought BW, Knox BE, Birge RR. The photobleaching sequence of a short-wavelength visual pigment. Biochemistry. 40: 7832-44. PMID 11425310 DOI: 10.1021/Bi010387Y |
0.775 |
|
| 2001 |
Singh D, Hudson BS, Middleton C, Birge RR. Conformation and orientation of the retinyl chromophore in rhodopsin: a critical evaluation of recent NMR data on the basis of theoretical calculations results in a minimum energy structure consistent with all experimental data. Biochemistry. 40: 4201-4. PMID 11284674 DOI: 10.1021/Bi001911O |
0.495 |
|
| 2001 |
Xu J, Bhattacharya P, Marcy DL, Stuart JA, Birge RR. Photoconduction in bacteriorhodopsin/GaAs heterostructures Electronics Letters. 37: 648-649. DOI: 10.1049/El:20010426 |
0.332 |
|
| 2001 |
Dolan PM, Miller D, Cogdell RJ, Birge RR, Frank HA. Linear dichroism and the transition dipole moment orientation of the carotenoid in the LH2 antenna complex in membranes of Rhodopseudomonas acidophila strain 10050 Journal of Physical Chemistry B. 105: 12134-12142. DOI: 10.1021/Jp010271B |
0.332 |
|
| 2001 |
Wolak MA, Gillespie NB, Thomas CJ, Birge RR, Lees WJ. Optical properties of photochromic fluorinated indolylfulgides Journal of Photochemistry and Photobiology a-Chemistry. 144: 83-91. DOI: 10.1016/S1010-6030(01)00550-0 |
0.716 |
|
| 2001 |
Wolak MA, Gillespie NB, Thomas CJ, Birge RR, Lees WJ. Optical properties of photochromic fluorinated indolylfulgides Journal of Photochemistry and Photobiology a: Chemistry. 144: 83-91. |
0.666 |
|
| 2000 |
Vought BW, Salcedo E, Chadwell LV, Britt SG, Birge RR, Knox BE. Characterization of the primary photointermediates of Drosophila rhodopsin. Biochemistry. 39: 14128-37. PMID 11087361 DOI: 10.1021/Bi001135K |
0.436 |
|
| 2000 |
He Z, Martin CH, Birge R, Freed KF. Theoretical studies on excited states of a phenolate anion in the environment of photoactive yellow protein Journal of Physical Chemistry A. 104: 2939-2952. DOI: 10.1021/Jp992615S |
0.376 |
|
| 1999 |
Vought BW, Dukkipatti A, Max M, Knox BE, Birge RR. Photochemistry of the primary event in short-wavelength visual opsins at low temperature. Biochemistry. 38: 11287-97. PMID 10471278 DOI: 10.1021/Bi990968B |
0.394 |
|
| 1999 |
Kusnetzow A, Singh DL, Martin CH, Barani IJ, Birge RR. Nature of the chromophore binding site of bacteriorhodopsin: the potential role of Arg82 as a principal counterion. Biophysical Journal. 76: 2370-89. PMID 10233056 DOI: 10.1016/S0006-3495(99)77394-7 |
0.575 |
|
| 1999 |
Birge RR, Gillespie NB, Izaguirre EW, Kusnetzow A, Lawrence AF, Singh D, Song QW, Schmidt E, Stuart JA, Seetharaman S, Wise KJ. Biomolecular Electronics: Protein-Based Associative Processors and Volumetric Memories Journal of Physical Chemistry B. 103: 10746-10766. DOI: 10.1021/Jp991883N |
0.753 |
|
| 1998 |
Tallent JR, Stuart JA, Song QW, Schmidt EJ, Martin CH, Birge RR. Photochemistry in dried polymer films incorporating the deionized blue membrane form of bacteriorhodopsin. Biophysical Journal. 75: 1619-34. PMID 9746505 DOI: 10.1016/S0006-3495(98)77605-2 |
0.794 |
|
| 1998 |
Yamazaki M, Goodisman J, Birge RR. Quadratic electro-optic effects in bacteriorhodopsin: Measurement of γ(-ω;0,0,ω) in dried gelatin thin films Journal of Chemical Physics. 108: 5876-5887. DOI: 10.1063/1.475998 |
0.317 |
|
| 1998 |
Martin CH, Birge RR. Reparametrizing MNDO for Excited-State Calculations by Using ab Initio Effective Hamiltonian Theory: Application to the 2,4-Pentadien-1-iminium Cation The Journal of Physical Chemistry A. 102: 852-860. DOI: 10.1021/Jp9722972 |
0.349 |
|
| 1998 |
Li F, Yang SI, Ciringh Y, Seth J, Martin CH, Singh DL, Kim D, Birge RR, Bocian DF, Holten D, Lindsey JS. Design, synthesis, and photodynamics of light-harvesting arrays comprised of a porphyrin and one, two, or eight boron-dipyrrin accessory pigments Journal of the American Chemical Society. 120: 10001-10017. DOI: 10.1021/Ja9812047 |
0.579 |
|
| 1996 |
Tallent J, Song QW, Li Z, Stuart J, Birge RR. Effective photochromic nonlinearity of dried blue-membrane bacteriorhodopsin films. Optics Letters. 21: 1339-41. PMID 19876345 DOI: 10.1364/Ol.21.001339 |
0.766 |
|
| 1996 |
Birge RR, Govender DSK, Izgi KC, Tan EHL. Role of Calcium in the Proton Pump of Bacteriorhodopsin. Microwave Evidence for a Cation-Gated Mechanism The Journal of Physical Chemistry. 100: 9990-10004. DOI: 10.1021/Jp953669E |
0.338 |
|
| 1996 |
Tan EHL, Govender DSK, Birge RR. Large Organic Cations Can Replace Mg2+and Ca2+Ions in Bacteriorhodopsin and Maintain Proton Pumping Ability Journal of the American Chemical Society. 118: 2752-2753. DOI: 10.1021/Ja953491+ |
0.318 |
|
| 1995 |
Birge RR, Barlow RB. On the molecular origins of thermal noise in vertebrate and invertebrate photoreceptors. Biophysical Chemistry. 55: 115-26. PMID 7632872 DOI: 10.1016/0301-4622(94)00145-A |
0.327 |
|
| 1995 |
Stuart JA, Vought BW, Zhang C‐, Birge RR. The active site of bacteriorhodopsin. Two‐photon spectroscopic evidence for a positively charged chromophore binding site mediated by calcium Biospectroscopy. 1: 9-28. DOI: 10.1002/Bspy.350010104 |
0.335 |
|
| 1994 |
Song Q, Zhang C, Gross RB, Birge RR. The intensity-dependent refractive index of chemically enhanced bacteriorhodopsin Optics Communications. 112: 296-301. DOI: 10.1016/0030-4018(94)90634-3 |
0.318 |
|
| 1993 |
Song QW, Zhang C, Blumer R, Gross RB, Chen Z, Birge RR. Chemically enhanced bacteriorhodopsin thin-film spatial light modulator. Optics Letters. 18: 1373. PMID 19823387 DOI: 10.1364/Ol.18.001373 |
0.351 |
|
| 1993 |
Birge RR. The unusual pK(a) of the rhodopsin chromophore: Is this how nature minimizes photoreceptor noise? Biophysical Journal. 64: 1371-2. PMID 19431891 DOI: 10.1016/S0006-3495(93)81501-7 |
0.37 |
|
| 1993 |
Barlow RB, Birge RR, Kaplan E, Tallent JR. On the molecular origin of photoreceptor noise. Nature. 366: 64-6. PMID 8232538 DOI: 10.1038/366064A0 |
0.787 |
|
| 1992 |
Tallent JR, Birge JR, Zhang CF, Wenderholm E, Birge RR. Conformational energetics and excited state level ordering in 11-cis retinal. Photochemistry and Photobiology. 56: 935-52. PMID 1492137 DOI: 10.1111/J.1751-1097.1992.Tb09716.X |
0.804 |
|
| 1992 |
Birge R. Protein-based optical computing and memories Computer. 25: 56-67. DOI: 10.1109/2.166417 |
0.31 |
|
| 1992 |
Tallent JR, Hyde EW, Findsen LA, Fox GC, Birge RR. Molecular dynamics of the primary photochemical event in rhodopsin Journal of the American Chemical Society. 114: 1581-1592. DOI: 10.1021/Ja00031A007 |
0.781 |
|
| 1991 |
Birge RR, Lawrence AF, Tallent JR. Quantum effects, thermal statistics and reliability of nanoscale molecular and semiconductor devices Nanotechnology. 2: 73-87. DOI: 10.1088/0957-4484/2/2/001 |
0.766 |
|
| 1990 |
Birge RR. Photophysics and molecular electronic applications of the rhodopsins. Annual Review of Physical Chemistry. 41: 683-733. PMID 2257039 DOI: 10.1146/Annurev.Pc.41.100190.003343 |
0.38 |
|
| 1990 |
Birge RR, Izgi KC, Stuart JA, Tallent JR. Wavelength Dependence of the Photorefractive and Photodiffractive Properties of Holographic Thin Films Based on Bacteriorhodopsin Mrs Proceedings. 218. DOI: 10.1557/Proc-218-131 |
0.788 |
|
| 1990 |
Birge RR, Fleitz PA, Lawrence AF, Masthay MA, Zhang CF. Nonlinear Optical Properties of Bacteriorhodopsin: Assignment of Second Order Hyperpolarizabilities of Randomly Oriented Systems Using Two-Photon Spectroscopy Molecular Crystals and Liquid Crystals Incorporating Nonlinear Optics. 189: 107-122. DOI: 10.1080/00268949008037226 |
0.327 |
|
| 1990 |
Birge RR, Zhang C. Two‐photon double resonance spectroscopy of bacteriorhodopsin. Assignment of the electronic and dipolar properties of the low‐lying 1A*−g‐like and 1B*+u‐like π, π* states The Journal of Chemical Physics. 92: 7178-7195. DOI: 10.1063/1.458206 |
0.366 |
|
| 1988 |
Findsen LA, Bocian DF, Birge RR. A theoretical evaluation of the vinyl torsional potential in protoporphyrins The Journal of Chemical Physics. 88: 7588-7598. DOI: 10.1063/1.454323 |
0.318 |
|
| 1988 |
Schick GA, Lawrence AF, Birge RR. Biotechnology and molecular computing Trends in Biotechnology. 6: 159-163. DOI: 10.1016/0167-7799(88)90086-8 |
0.549 |
|
| 1987 |
Schick GA, Cooper TM, Holloway RA, Murray LP, Birge RR. Energy storage in the primary photochemical events of rhodopsin and isorhodopsin Biochemistry. 26: 2556-2562. PMID 3607033 DOI: 10.1021/Bi00383A022 |
0.623 |
|
| 1987 |
Lawrence AF, McDaniel JC, Chang DB, Birge RR. The nature of phonons and solitary waves in alpha-helical proteins. Biophysical Journal. 51: 785-93. PMID 3593874 DOI: 10.1016/S0006-3495(87)83405-7 |
0.307 |
|
| 1987 |
Birge RR, Findsen LA, Pierce BM. Molecular dynamics of the primary photochemical event in bacteriorhodopsin. Theoretical evidence for an excited singlet state assignment for the J intermediate Journal of the American Chemical Society. 109: 5041-5043. DOI: 10.1021/Ja00250A056 |
0.337 |
|
| 1987 |
Boldt NJ, Donohoe RJ, Birge RR, Bocian DF. Chlorophyll model compounds: effects of low symmetry on the resonance Raman spectra and normal mode descriptions of nickel(II) dihydroporphyrins Journal of the American Chemical Society. 109: 2284-2298. DOI: 10.1021/Ja00242A009 |
0.317 |
|
| 1987 |
Birge RR, Murray LP, Zidovetzki R, Knapp HM. Two-photon, carbon-13 and two-dimensional proton NMR spectroscopic studies of retinyl Schiff bases, protonated Schiff bases and Schiff base salts: evidence for a protonation induced .pi..pi.* excited state level ordering reversal Journal of the American Chemical Society. 109: 2090-2101. DOI: 10.1021/Ja00241A029 |
0.36 |
|
| 1986 |
Masthay MB, Findsen LA, Pierce BM, Bocian DF, Lindsey JS, Birge RR. A theoretical investigation of the one‐ and two‐photon properties of porphyrins The Journal of Chemical Physics. 84: 3901-3915. DOI: 10.1063/1.450827 |
0.378 |
|
| 1986 |
Birge RR. Two-photon spectroscopy of protein-bound chromophores Accounts of Chemical Research. 19: 138-146. DOI: 10.1021/Ar00125A003 |
0.313 |
|
| 1985 |
Birge RR, Murray LP, Pierce BM, Akita H, Balogh-Nair V, Findsen LA, Nakanishi K. Two-photon spectroscopy of locked-11-cis-rhodopsin: evidence for a protonated Schiff base in a neutral protein binding site. Proceedings of the National Academy of Sciences of the United States of America. 82: 4117-21. PMID 2987964 DOI: 10.1073/Pnas.82.12.4117 |
0.385 |
|
| 1985 |
Murray LP, Birge RR. Two-photon spectroscopy of the Schiff base of all-trans-retinal. Nature of the low-lying π π* singlet states Canadian Journal of Chemistry. 63: 1967-1971. DOI: 10.1139/V85-325 |
0.408 |
|
| 1984 |
CHANDRARATNA RAS, OKAMURA WH, BIRGE RR. ChemInform Abstract: 12-S-cis Conformationally Locked Retinoids: Thermal and Photochemical Interconversions Leading to New Geometric Isomers. Electronic Spectra of 12-S-cis Conformationally Locked Retinals. Chemischer Informationsdienst. 15. DOI: 10.1002/Chin.198427345 |
0.304 |
|
| 1983 |
Birge RR, Schick GA, Bocian DF. Calculation of molecular polarizabilities using a semiclassical Slater‐type orbital‐point dipole interaction (STOPDI) model The Journal of Chemical Physics. 79: 2256-2264. DOI: 10.1063/1.446075 |
0.61 |
|
| 1982 |
Pierce BM, Bennett JA, Birge RR. Two‐photon excitation spectroscopy of a substituted all‐trans hexatriene (iso‐tachysterol). Spectroscopic assignments of the low‐lying 1‘‘1Bu*+’’ and 2‘‘1Ag*−’’ ππ* states The Journal of Chemical Physics. 77: 6343-6344. DOI: 10.1063/1.443808 |
0.346 |
|
| 1982 |
Birge RR, Bennett JA, Hubbard LM, Fang HL, Pierce BM, Kliger DS, Leroi GE. Two-photon spectroscopy of all-trans-retinal. Nature of the low-lying singlet states Journal of the American Chemical Society. 104: 2519-2525. DOI: 10.1021/Ja00373A031 |
0.354 |
|
| 1982 |
Birge RR. [67] Energy levels of the visual chromophores by two-photon spectroscopy Methods in Enzymology. 88: 522-532. DOI: 10.1016/0076-6879(82)88070-1 |
0.326 |
|
| 1982 |
Goldbeck RA, Twarowski AJ, Russell EL, Rice JK, Birge RR, Switkes E, Kliger DS. Excited state absorption spectroscopy and state ordering in polyenes. II. α,ω-diphenylpolyenes The Journal of Chemical Physics. 77: 3319-3328. DOI: 10.1002/Chin.198252056 |
0.327 |
|
| 1981 |
Bocian DF, Schick GA, Hurd JK, Birge RR. Calculation of Raman intensities for the torsional vibrations of methylcyclopropane and propylene oxide The Journal of Chemical Physics. 76: 6454-6456. DOI: 10.1063/1.443010 |
0.616 |
|
| 1981 |
Bocian DF, Schick GA, Hurd KJ, Birge RR. Calculation of Raman intensities for the torsional vibrations of ethyl halides The Journal of Chemical Physics. 76: 4828-4833. DOI: 10.1063/1.442801 |
0.587 |
|
| 1981 |
Bocian DF, Schick GA, Birge RR. Calculation of Raman intensities for the ring-puckering vibrations of cyclopentene and 2,5-dihydrofuran The Journal of Chemical Physics. 75: 3215-3219. DOI: 10.1063/1.442494 |
0.628 |
|
| 1981 |
Bocian DF, Schick GA, Birge RR. Calculation of Raman intensities for the ring-puckering vibrations of 2,5-dihydropyrrole and trimethyleneimine. Electrical versus mechanical anharmonicity in asymmetric potential wells The Journal of Chemical Physics. 75: 2626-2634. DOI: 10.1063/1.442417 |
0.623 |
|
| 1981 |
Bocian DF, Schick GA, Birge RR. Calculation of Raman intensities for the ring-puckering vibrations of trimethylene oxide and cyclobutane. The importance of electrical anharmonicity The Journal of Chemical Physics. 74: 3660-3667. DOI: 10.1063/1.441592 |
0.621 |
|
| 1981 |
Hubbard LM, Bocian DF, Birge RR. The nature of the 1n.pi.* .rarw. S0 transition. 4. The first excited singlet state of acetaldehyde Journal of the American Chemical Society. 103: 3313-3320. DOI: 10.1021/Ja00402A016 |
0.318 |
|
| 1981 |
Myers AB, Birge RR. The ground-state dipole moments of all-trans- and 9-cis-retinal Journal of the American Chemical Society. 103: 1881-1885. DOI: 10.1021/Ja00398A001 |
0.321 |
|
| 1981 |
BENNETT JA, BIRGE RR. ChemInform Abstract: TWO-PHOTON SPECTROSCOPY OF DIPHENYLBUTADIENE. THE NATURE OF THE LOWEST-LYING 1AG*- ΠΠ* STATE Chemischer Informationsdienst. 12. DOI: 10.1002/Chin.198110046 |
0.304 |
|
| 1980 |
Bennett JA, Birge RR. Two‐photon spectroscopy of diphenylbutadiene. The nature of the lowest‐lying 1Ag*−ππ* state The Journal of Chemical Physics. 73: 4234-4246. DOI: 10.1063/1.440706 |
0.364 |
|
| 1980 |
Honig B, Dinur U, Birge RR, Ebrey TG. The isomer dependence of oscillator strengths in retinal and related molecules. Spectroscopic assignments Journal of the American Chemical Society. 102: 488-494. DOI: 10.1021/Ja00522A008 |
0.507 |
|
| 1978 |
Birge RR, Bennett JA, Pierce BM, Thomas TM. Two-photon spectroscopy of the visual chromophores. Evidence for a lowest excited 1Ag--like .pi..pi.* state in all-trans-retinol (vitamin A) Journal of the American Chemical Society. 100: 1533-1539. DOI: 10.1021/Ja00473A035 |
0.323 |
|
| 1976 |
Birge RR, Sullivan MJ, Kohler BE. The effect of temperature and solvent environment on the conformational stability of 11-cis-retinal Journal of the American Chemical Society. 98: 358-367. PMID 1245683 DOI: 10.1002/Chin.197615067 |
0.301 |
|
| 1975 |
Abram II, Auerbach RA, Birge RR, Kohler BE, Stevenson JM. Narrow-line fluorescence spectra of perylene as a function of excitation wavelength The Journal of Chemical Physics. 63: 2473-2478. DOI: 10.1063/1.431688 |
0.305 |
|
| 1975 |
Birge RR, Schulten K, Karplus M. Possible influence of a low-lying “covalent” excited state on the absorption spectrum and photoisomerization of 11-cis retinal Chemical Physics Letters. 31: 451-454. DOI: 10.1016/0009-2614(75)85062-7 |
0.568 |
|
| 1973 |
BIRGE RR, LEERMAKERS PA. ChemInform Abstract: GEOMETRIEN ANGEREGTER ZUSTAENDE VON EINFACH SUBSTITUIERTEN METHYLPROPENALEN 3. MITT. GEOMETRIE, SUBSTITUENTENWECHSELWIRKUNG FERMI-KORRELATION UND SPINBAHN-KOPPLUNG IM T1(N,PI(*)) Chemischer Informationsdienst. 4: no-no. DOI: 10.1002/Chin.197304091 |
0.595 |
|
| 1972 |
Birge RR, Leermakers PA. Nature of the n.far..pi.*transition. III. Excited-state geometries of the singly substituted methylpropenals. III. Geometry, substituent interaction, Fermi correlation, and spin-orbit coupling in T1(n,.pi.*) Journal of the American Chemical Society. 94: 8105-8117. DOI: 10.1021/Ja00778A029 |
0.635 |
|
| 1972 |
BIRGE RR, PRINGLE WC, LEERMAKERS PA. ChemInform Abstract: GEOMETRIEN DES ANGEREGTEN ZUSTANDS MONOSUBSTITUIERTER METHYLPROPENALE 1. MITT. UND 2. MITT. ANALYSE DES SCHWINGUNGSELEKTRONENBANDESNSYST. DES S(1)(N,PI(*)) Chemischer Informationsdienst. 3. DOI: 10.1002/Chin.197208073 |
0.596 |
|
| 1971 |
Birge RR, Leermakers PA. Excited-state geometries of the singly substituted methylpropenals. II. Bond order reversal and substituent interaction in S1(n,π*) Journal of the American Chemical Society. 93: 6726-6733. DOI: 10.1021/Ja00754A002 |
0.653 |
|
| 1971 |
Birge RR, Pringle WC, Leermakers PA. Excited-state geometries of the singly substituted methylpropenals. I. Vibrational-electronic analysis of S1(n,.pi.*) Journal of the American Chemical Society. 93: 6715-6726. DOI: 10.1021/Ja00754A001 |
0.649 |
|
| 1971 |
Birge RR, Pringle WC, Leermakers PA. Excited-state geometries of the singly substituted methylpropenals. I. Vibrational-electronic analysis of S1 (n,π*) Journal of the American Chemical Society. 93: 6715-6726. |
0.618 |
|
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