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Oskar Hallatschek - Publications

Affiliations: 
University of California, Berkeley, Berkeley, CA, United States 
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Schreck CF, Fusco D, Karita Y, Martis S, Kayser J, Duvernoy MC, Hallatschek O. Impact of crowding on the diversity of expanding populations. Proceedings of the National Academy of Sciences of the United States of America. 120: e2208361120. PMID 36881622 DOI: 10.1073/pnas.2208361120  0.411
2021 Okada T, Hallatschek O. Dynamic sampling bias and overdispersion induced by skewed offspring distributions. Genetics. PMID 34718557 DOI: 10.1093/genetics/iyab135  0.337
2021 Birzu G, Hallatschek O, Korolev KS. Genealogical structure changes as range expansions transition from pushed to pulled. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34413189 DOI: 10.1073/pnas.2026746118  0.358
2020 Denk J, Martis S, Hallatschek O. Chaos may lurk under a cloak of neutrality. Proceedings of the National Academy of Sciences of the United States of America. 117: 16104-16106. PMID 32601229 DOI: 10.1073/Pnas.2010120117  0.307
2020 Paulose J, Hallatschek O. The impact of long-range dispersal on gene surfing. Proceedings of the National Academy of Sciences of the United States of America. PMID 32198207 DOI: 10.1073/Pnas.1919485117  0.445
2019 Birzu G, Matin S, Hallatschek O, Korolev KS. Genetic drift in range expansions is very sensitive to density dependence in dispersal and growth. Ecology Letters. PMID 31496047 DOI: 10.1111/Ele.13364  0.416
2019 Gniewek P, Schreck CF, Hallatschek O. Biomechanical Feedback Strengthens Jammed Cellular Packings. Physical Review Letters. 122: 208102. PMID 31172757 DOI: 10.1103/Physrevlett.122.208102  0.392
2019 Gralka M, Hallatschek O. Environmental heterogeneity can tip the population genetics of range expansions. Elife. 8. PMID 30977724 DOI: 10.7554/Elife.44359  0.463
2019 Paulose J, Hermisson J, Hallatschek O. Spatial soft sweeps: Patterns of adaptation in populations with long-range dispersal. Plos Genetics. 15: e1007936. PMID 30742615 DOI: 10.1371/Journal.Pgen.1007936  0.486
2019 Garud NR, Good BH, Hallatschek O, Pollard KS. Evolutionary dynamics of bacteria in the gut microbiome within and across hosts. Plos Biology. 17: e3000102. PMID 30673701 DOI: 10.1371/Journal.Pbio.3000102  0.412
2019 Kayser J, Schreck CF, Gralka M, Fusco D, Hallatschek O. Collective motion conceals fitness differences in crowded cellular populations. Nature Ecology & Evolution. 3: 125-134. PMID 30510177 DOI: 10.1038/S41559-018-0734-9  0.422
2019 Gralka M, Hallatschek O. Author response: Environmental heterogeneity can tip the population genetics of range expansions Elife. DOI: 10.7554/Elife.44359.044  0.384
2018 Good BH, Hallatschek O. Effective models and the search for quantitative principles in microbial evolution. Current Opinion in Microbiology. 45: 203-212. PMID 30530175 DOI: 10.1016/J.Mib.2018.11.005  0.457
2018 Good BH, Martis S, Hallatschek O. Adaptation limits ecological diversification and promotes ecological tinkering during the competition for substitutable resources. Proceedings of the National Academy of Sciences of the United States of America. PMID 30322918 DOI: 10.1073/Pnas.1807530115  0.383
2018 Hallatschek O. Selection-Like Biases Emerge in Population Models with Recurrent Jackpot Events. Genetics. PMID 30171032 DOI: 10.1534/Genetics.118.301516  0.405
2018 Holt LJ, Hallatschek O, Delarue M. Mechano-chemostats to study the effects of compressive stress on yeast. Methods in Cell Biology. 147: 215-231. PMID 30165959 DOI: 10.1016/Bs.Mcb.2018.06.010  0.333
2018 Kayser J, Schreck CF, Yu Q, Gralka M, Hallatschek O. Emergence of evolutionary driving forces in pattern-forming microbial populations. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 29632260 DOI: 10.1098/rstb.2017.0106  0.324
2018 Kayser J, Schreck CF, Yu Q, Gralka M, Hallatschek O. Emergence of evolutionary driving forces in pattern-forming microbial populations. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 29632260 DOI: 10.1098/Rstb.2017.0106  0.428
2017 Delarue M, Weissman D, Hallatschek O. A simple molecular mechanism explains multiple patterns of cell-size regulation. Plos One. 12: e0182633. PMID 28813456 DOI: 10.1371/Journal.Pone.0182633  0.665
2017 Weissman DB, Hallatschek O. Minimal-assumption inference from population-genomic data. Elife. 6. PMID 28671549 DOI: 10.7554/Elife.24836  0.676
2017 Gralka M, Fusco D, Martis S, Hallatschek O. Convection shapes the trade-off between antibiotic efficacy and the selection for resistance in spatial gradients. Physical Biology. PMID 28649977 DOI: 10.1088/1478-3975/Aa7Bb3  0.322
2017 Farrell FD, Gralka M, Hallatschek O, Waclaw B. Mechanical interactions in bacterial colonies and the surfing probability of beneficial mutations. Journal of the Royal Society, Interface. 14. PMID 28592660 DOI: 10.1098/Rsif.2017.0073  0.341
2017 Weissman DB, Hallatschek O. Author response: Minimal-assumption inference from population-genomic data Elife. DOI: 10.7554/Elife.24836.014  0.357
2017 Delarue M, Brittingham G, Hallatschek O, Holt L. Compressive Stress Stalls Growth and Decreases Cytoplasmic Diffion Biophysical Journal. 112: 435a-436a. DOI: 10.1016/J.Bpj.2016.11.2326  0.3
2016 Fusco D, Gralka M, Kayser J, Anderson A, Hallatschek O. Excess of mutational jackpot events in expanding populations revealed by spatial Luria-Delbrück experiments. Nature Communications. 7: 12760. PMID 27694797 DOI: 10.1038/Ncomms12760  0.442
2016 Delarue M, Hartung J, Schreck C, Gniewek P, Hu L, Herminghaus S, Hallatschek O. Self-Driven Jamming in Growing Microbial Populations. Nature Physics. 12: 762-766. PMID 27642362 DOI: 10.1038/Nphys3741  0.381
2016 Gralka M, Fusco D, Hallatschek O. Watching Populations Melt Down. Biophysical Journal. 111: 271-2. PMID 27463129 DOI: 10.1016/J.Bpj.2016.06.020  0.394
2016 Gralka M, Stiewe F, Farrell F, Möbius W, Waclaw B, Hallatschek O. Allele surfing promotes microbial adaptation from standing variation. Ecology Letters. 19: 889-98. PMID 27307400 DOI: 10.1111/Ele.12625  0.461
2016 Hallatschek O, Geyrhofer L. Collective Fluctuations in the Dynamics of Adaptation and Other Traveling Waves. Genetics. 202: 1201-27. PMID 26819246 DOI: 10.1534/Genetics.115.181271  0.467
2015 Sedeh RS, Pan K, Adendorff MR, Hallatschek O, Bathe KJ, Bathe M. Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies. Journal of Chemical Theory and Computation. PMID 26636351 DOI: 10.1021/Acs.Jctc.5B00965  0.306
2014 Hallatschek O, Fisher DS. Acceleration of evolutionary spread by long-range dispersal. Proceedings of the National Academy of Sciences of the United States of America. 111: E4911-9. PMID 25368183 DOI: 10.1073/Pnas.1404663111  0.577
2014 Weissman DB, Hallatschek O. The rate of adaptation in large sexual populations with linear chromosomes. Genetics. 196: 1167-83. PMID 24429280 DOI: 10.1534/Genetics.113.160705  0.705
2013 Farrell FD, Hallatschek O, Marenduzzo D, Waclaw B. Mechanically driven growth of quasi-two-dimensional microbial colonies. Physical Review Letters. 111: 168101. PMID 24182305 DOI: 10.1103/Physrevlett.111.168101  0.309
2013 Flot JF, Hespeels B, Li X, Noel B, Arkhipova I, Danchin EG, Hejnol A, Henrissat B, Koszul R, Aury JM, Barbe V, Barthélémy RM, Bast J, Bazykin GA, Chabrol O, ... ... Hallatschek O, et al. Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga. Nature. 500: 453-7. PMID 23873043 DOI: 10.1038/Nature12326  0.326
2013 Martens EA, Thutupalli S, Fourrière A, Hallatschek O. Chimera states in mechanical oscillator networks. Proceedings of the National Academy of Sciences of the United States of America. 110: 10563-7. PMID 23759743 DOI: 10.1073/Pnas.1302880110  0.317
2013 Nullmeier J, Hallatschek O. The coalescent in boundary-limited range expansions. Evolution; International Journal of Organic Evolution. 67: 1307-20. PMID 23617910 DOI: 10.1111/Evo.12037  0.368
2013 Neher RA, Hallatschek O. Genealogies of rapidly adapting populations. Proceedings of the National Academy of Sciences of the United States of America. 110: 437-42. PMID 23269838 DOI: 10.1073/Pnas.1213113110  0.461
2013 Geyrhofer L, Hallatschek O. Stochastic delocalization of finite populations Journal of Statistical Mechanics: Theory and Experiment. 2013: P01007. DOI: 10.1088/1742-5468/2013/01/P01007  0.464
2012 Lehe R, Hallatschek O, Peliti L. The rate of beneficial mutations surfing on the wave of a range expansion. Plos Computational Biology. 8: e1002447. PMID 22479175 DOI: 10.1371/Journal.Pcbi.1002447  0.409
2012 Korolev KS, Müller MJ, Karahan N, Murray AW, Hallatschek O, Nelson DR. Selective sweeps in growing microbial colonies. Physical Biology. 9: 026008. PMID 22476106 DOI: 10.1088/1478-3975/9/2/026008  0.354
2012 Good BH, Rouzine IM, Balick DJ, Hallatschek O, Desai MM. Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations. Proceedings of the National Academy of Sciences of the United States of America. 109: 4950-5. PMID 22371564 DOI: 10.1073/Pnas.1119910109  0.44
2012 Hallatschek O. Bacteria Evolve to Go Against the Grain Physics. 5. DOI: 10.1103/Physics.5.93  0.307
2011 Martens EA, Kostadinov R, Maley CC, Hallatschek O. Spatial structure increases the waiting time for cancer. New Journal of Physics. 13. PMID 22707911 DOI: 10.1088/1367-2630/13/11/115014  0.36
2011 Martens EA, Hallatschek O. Interfering waves of adaptation promote spatial mixing. Genetics. 189: 1045-60. PMID 21900264 DOI: 10.1534/Genetics.111.130112  0.493
2011 Hallatschek O. Noise driven evolutionary waves. Plos Computational Biology. 7: e1002005. PMID 21423714 DOI: 10.1371/Journal.Pcbi.1002005  0.444
2011 Hallatschek O. The noisy edge of traveling waves. Proceedings of the National Academy of Sciences of the United States of America. 108: 1783-7. PMID 21187435 DOI: 10.1073/Pnas.1013529108  0.363
2010 Korolev KS, Avlund M, Hallatschek O, Nelson DR. Genetic demixing and evolution in linear stepping stone models. Reviews of Modern Physics. 82: 1691-1718. PMID 21072144 DOI: 10.1103/Revmodphys.82.1691  0.476
2010 Hallatschek O, Nelson DR. Life at the front of an expanding population. Evolution; International Journal of Organic Evolution. 64: 193-206. PMID 19682067 DOI: 10.1111/J.1558-5646.2009.00809.X  0.474
2009 Hallatschek O, Nelson DR. Population genetics and range expansions Physics Today. 62: 42-47. DOI: 10.1063/1.3177227  0.42
2008 Hallatschek O, Nelson DR. Gene surfing in expanding populations. Theoretical Population Biology. 73: 158-70. PMID 17963807 DOI: 10.1016/J.Tpb.2007.08.008  0.432
2007 Hallatschek O, Hersen P, Ramanathan S, Nelson DR. Genetic drift at expanding frontiers promotes gene segregation. Proceedings of the National Academy of Sciences of the United States of America. 104: 19926-30. PMID 18056799 DOI: 10.1073/Pnas.0710150104  0.711
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