Year |
Citation |
Score |
2020 |
Malkin D, Light N, Subrasi V, Brew B, Paramathas S, Nabbi A, Prykhozhij S, Pugh T, Berman J, Goldenberg A, Shlien A. Abstract IA02: Novel strategies for early cancer detection and prevention: The Li-Fraumeni syndrome story Cancer Research. 80. DOI: 10.1158/1538-7445.Pedca19-Ia02 |
0.308 |
|
2019 |
Mer AS, Ba-Alawi W, Smirnov P, Wang YX, Brew B, Ortmann J, Tsao MS, Cescon DW, Goldenberg A, Haibe-Kains B. Integrative pharmacogenomics analysis of patient-derived xenografts. Cancer Research. PMID 31142512 DOI: 10.1158/0008-5472.Can-19-0349 |
0.345 |
|
2019 |
Nelson W, Zitnik M, Wang B, Leskovec J, Goldenberg A, Sharan R. To Embed or Not: Network Embedding as a Paradigm in Computational Biology. Frontiers in Genetics. 10: 381. PMID 31118945 DOI: 10.3389/Fgene.2019.00381 |
0.302 |
|
2019 |
Rampášek L, Hidru D, Smirnov P, Haibe-Kains B, Goldenberg A. Dr.VAE: Improving drug response prediction via modeling of drug perturbation effects. Bioinformatics (Oxford, England). PMID 30850846 DOI: 10.1093/Bioinformatics/Btz158 |
0.307 |
|
2019 |
Zitnik M, Nguyen F, Wang B, Leskovec J, Goldenberg A, Hoffman MM. Machine Learning for Integrating Data in Biology and Medicine: Principles, Practice, and Opportunities. An International Journal On Information Fusion. 50: 71-91. PMID 30467459 DOI: 10.1016/J.Inffus.2018.09.012 |
0.335 |
|
2019 |
Mer AS, Ba-alawi W, Smirnov P, Wang YX, Brew B, Tsao M, Cescon D, Goldenberg A, Haibe-Kains B. Abstract 3378: Systematic pharmacogenomic analysis of large patient derived xenografts data Cancer Research. 79: 3378-3378. DOI: 10.1158/1538-7445.Am2019-3378 |
0.351 |
|
2019 |
Subasri V, Light N, Brew B, Anderson N, Shlien A, Goldenberg A, Malkin D. Abstract 1639: Predictive modeling of cancer-type in Li-Fraumeni syndrome Cancer Research. 79: 1639-1639. DOI: 10.1158/1538-7445.Am2019-1639 |
0.341 |
|
2018 |
Zizzo AN, Erdman L, Feldman BM, Goldenberg A. Similarity Network Fusion: A Novel Application to Making Clinical Diagnoses. Rheumatic Diseases Clinics of North America. 44: 285-293. PMID 29622295 DOI: 10.1016/J.Rdc.2018.01.005 |
0.321 |
|
2017 |
Mezlini AM, Goldenberg A. Incorporating networks in a probabilistic graphical model to find drivers for complex human diseases. Plos Computational Biology. 13: e1005580. PMID 29023450 DOI: 10.1371/Journal.Pcbi.1005580 |
0.313 |
|
2017 |
Mamatjan Y, Agnihotri S, Goldenberg A, Tonge P, Mansouri S, Zadeh G, Aldape K. Molecular Signatures for Tumor Classification An Analysis of TCGA Data. The Journal of Molecular Diagnostics : Jmd. PMID 28867603 DOI: 10.1016/J.Jmoldx.2017.07.008 |
0.326 |
|
2017 |
Cavalli FMG, Remke M, Rampasek L, Peacock J, Shih DJH, Luu B, Garzia L, Torchia J, Nor C, Morrissy AS, Agnihotri S, Thompson YY, Kuzan-Fischer CM, Farooq H, Isaev K, ... ... Goldenberg A, et al. Intertumoral Heterogeneity within Medulloblastoma Subgroups. Cancer Cell. 31: 737-754.e6. PMID 28609654 DOI: 10.1016/J.Ccell.2017.05.005 |
0.311 |
|
2017 |
Brew BM, Malkin D, Erdman L, Doria A, Berman J, Shlien A, Guha T, Novokmet A, Goldenberg A. Abstract 973: Methylation accurately predicts age of cancer onset in patients with Li Fraumeni Syndrome Cancer Research. 77: 973-973. DOI: 10.1158/1538-7445.Am2017-973 |
0.311 |
|
2016 |
Safikhani Z, Smirnov P, Freeman M, El-Hachem N, She A, Rene Q, Goldenberg A, Birkbak NJ, Hatzis C, Shi L, Beck AH, Aerts HJWL, Quackenbush J, Haibe-Kains B. Revisiting inconsistency in large pharmacogenomic studies. F1000research. 5: 2333. PMID 28928933 DOI: 10.12688/F1000Research.9611.3 |
0.323 |
|
2016 |
Safikhani Z, El-Hachem N, Quevedo R, Smirnov P, Goldenberg A, Juul Birkbak N, Mason C, Hatzis C, Shi L, Aerts HJ, Quackenbush J, Haibe-Kains B. Assessment of pharmacogenomic agreement. F1000research. 5: 825. PMID 27408686 DOI: 10.12688/F1000Research.8705.1 |
0.318 |
|
2015 |
Smirnov P, Safikhani Z, El-Hachem N, Wang D, She A, Olsen C, Freeman M, Selby H, Gendoo DM, Grossman P, Beck AH, Aerts HJ, Lupien M, Goldenberg A, Haibe-Kains B. PharmacoGx: An R package for analysis of large pharmacogenomic datasets. Bioinformatics (Oxford, England). PMID 26656004 DOI: 10.1093/Bioinformatics/Btv723 |
0.336 |
|
2014 |
Wang B, Mezlini AM, Demir F, Fiume M, Tu Z, Brudno M, Haibe-Kains B, Goldenberg A. Similarity network fusion for aggregating data types on a genomic scale. Nature Methods. 11: 333-7. PMID 24464287 DOI: 10.1038/Nmeth.2810 |
0.357 |
|
2013 |
Mezlini AM, Smith EJ, Fiume M, Buske O, Savich GL, Shah S, Aparicio S, Chiang DY, Goldenberg A, Brudno M. iReckon: simultaneous isoform discovery and abundance estimation from RNA-seq data. Genome Research. 23: 519-29. PMID 23204306 DOI: 10.1101/Gr.142232.112 |
0.316 |
|
2011 |
Goldenberg A, Mostafavi S, Quon G, Boutros PC, Morris QD. Unsupervised detection of genes of influence in lung cancer using biological networks. Bioinformatics (Oxford, England). 27: 3166-72. PMID 21965819 DOI: 10.1093/Bioinformatics/Btr533 |
0.325 |
|
2011 |
Mostafavi S, Goldenberg A, Morris Q. Predicting node characteristics from molecular networks. Methods in Molecular Biology (Clifton, N.J.). 781: 399-414. PMID 21877293 DOI: 10.1007/978-1-61779-276-2_20 |
0.301 |
|
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