| Year |
Citation |
Score |
| 2024 |
Koo BM, Todor H, Sun J, van Gestel J, Hawkins JS, Hearne CC, Banta AB, Huang KC, Peters JM, Gross CA. Comprehensive double-mutant analysis of the envelope using double-CRISPRi. Biorxiv : the Preprint Server For Biology. PMID 39185233 DOI: 10.1101/2024.08.14.608006 |
0.782 |
|
| 2024 |
Bacon EE, Myers KS, Iruegas-López R, Banta AB, Place M, Ebersberger I, Peters JM. Physiological Roles of an -specific σ Factor. Biorxiv : the Preprint Server For Biology. PMID 39026751 DOI: 10.1101/2024.07.08.602572 |
0.731 |
|
| 2024 |
Bacon EE, Tran JS, Nadig N, Peters JM. Modular, inducible, and titratable expression systems for and . Biorxiv : the Preprint Server For Biology. PMID 38853957 DOI: 10.1101/2024.05.28.596346 |
0.311 |
|
| 2024 |
Enright AL, Heelan WJ, Ward RD, Peters JM. CRISPRi functional genomics in bacteria and its application to medical and industrial research. Microbiology and Molecular Biology Reviews : Mmbr. e0017022. PMID 38809084 DOI: 10.1128/mmbr.00170-22 |
0.366 |
|
| 2024 |
Geyman LJ, Tanner MP, Rosario-Meléndez N, Peters JM, Mandel MJ, van Kessel JC. Mobile-CRISPRi as a powerful tool for modulating gene expression. Applied and Environmental Microbiology. e0006524. PMID 38775491 DOI: 10.1128/aem.00065-24 |
0.468 |
|
| 2024 |
Banta AB, Myers KS, Ward RD, Cuellar RA, Place M, Freeh CC, Bacon EE, Peters JM. A Targeted Genome-scale Overexpression Platform for Proteobacteria. Biorxiv : the Preprint Server For Biology. PMID 38496613 DOI: 10.1101/2024.03.01.582922 |
0.741 |
|
| 2024 |
Geyman L, Tanner M, Rosario-Melendez N, Peters J, Mandel MJ, van Kessel JC. Mobile-CRISPRi as a powerful tool for modulating gene expression. Biorxiv : the Preprint Server For Biology. PMID 38293084 DOI: 10.1101/2024.01.17.575898 |
0.463 |
|
| 2023 |
Ward RD, Tran JS, Banta AB, Bacon EE, Rose WE, Peters JM. Essential gene knockdowns reveal genetic vulnerabilities and antibiotic sensitivities in . Mbio. e0205123. PMID 38126769 DOI: 10.1128/mbio.02051-23 |
0.724 |
|
| 2023 |
Enright AL, Banta AB, Ward RD, Rivera Vazquez J, Felczak MM, Wolfe MB, TerAvest MA, Amador-Noguez D, Peters JM. The genetics of aerotolerant growth in an alphaproteobacterium with a naturally reduced genome. Mbio. e0148723. PMID 37905909 DOI: 10.1128/mbio.01487-23 |
0.741 |
|
| 2023 |
Yu MA, Banta AB, Ward RD, Prasad NK, Kwon MS, Rosenberg OS, Peters JM. Investigating Pseudomonas aeruginosa Gene Function During Pathogenesis Using Mobile-CRISPRi. Methods in Molecular Biology (Clifton, N.J.). 2721: 13-32. PMID 37819512 DOI: 10.1007/978-1-0716-3473-8_2 |
0.733 |
|
| 2023 |
Hall AN, Hall BW, Kinney KJ, Olsen GG, Banta AB, Noguera DR, Donohue TJ, Peters JM. Tools for Genetic Engineering and Gene Expression Control in and . Biorxiv : the Preprint Server For Biology. PMID 37662258 DOI: 10.1101/2023.08.25.554875 |
0.71 |
|
| 2023 |
Ward RD, Tran JS, Banta AB, Bacon EE, Rose WE, Peters JM. Essential Gene Knockdowns Reveal Genetic Vulnerabilities and Antibiotic Sensitivities in . Biorxiv : the Preprint Server For Biology. PMID 37577569 DOI: 10.1101/2023.08.02.551708 |
0.748 |
|
| 2023 |
Murphy BT, Wiepen JJ, He H, Pramanik AS, Peters JM, Stevenson B, Zückert WR. Inducible CRISPRi-Based Operon Silencing and Selective in Gene Complementation in Borrelia burgdorferi. Journal of Bacteriology. e0046822. PMID 36719218 DOI: 10.1128/jb.00468-22 |
0.441 |
|
| 2022 |
Arjes HA, Gui H, Porter R, Atolia E, Peters JM, Gross C, Kearns DB, Huang KC. Fatty Acid Synthesis Knockdown Promotes Biofilm Wrinkling and Inhibits Sporulation in Bacillus subtilis. Mbio. e0138822. PMID 36069446 DOI: 10.1128/mbio.01388-22 |
0.6 |
|
| 2021 |
Silvis MR, Rajendram M, Shi H, Osadnik H, Gray AN, Cesar S, Peters JM, Hearne CC, Kumar P, Todor H, Huang KC, Gross CA. Morphological and Transcriptional Responses to CRISPRi Knockdown of Essential Genes in Escherichia coli. Mbio. e0256121. PMID 34634934 DOI: 10.1128/mBio.02561-21 |
0.649 |
|
| 2021 |
Shiver AL, Osadnik H, Peters JM, Mooney RA, Wu PI, Henry KK, Braberg H, Krogan NJ, Hu JC, Landick R, Huang KC, Gross CA. Chemical-genetic interrogation of RNA polymerase mutants reveals structure-function relationships and physiological tradeoffs. Molecular Cell. 81: 2201-2215.e9. PMID 34019789 DOI: 10.1016/j.molcel.2021.04.027 |
0.736 |
|
| 2021 |
Arjes HA, Willis L, Gui H, Xiao Y, Peters J, Gross C, Huang KC. Three-dimensional biofilm colony growth supports a mutualism involving matrix and nutrient sharing. Elife. 10. PMID 33594973 DOI: 10.7554/eLife.64145 |
0.517 |
|
| 2020 |
Banta AB, Ward RD, Tran JS, Bacon EE, Peters JM. Programmable Gene Knockdown in Diverse Bacteria Using Mobile-CRISPRi. Current Protocols in Microbiology. 59: e130. PMID 33332762 DOI: 10.1002/cpmc.130 |
0.72 |
|
| 2020 |
Hawkins JS, Silvis MR, Koo BM, Peters JM, Osadnik H, Jost M, Hearne CC, Weissman JS, Todor H, Gross CA. Mismatch-CRISPRi Reveals the Co-varying Expression-Fitness Relationships of Essential Genes in Escherichia coli and Bacillus subtilis. Cell Systems. PMID 33080209 DOI: 10.1016/j.cels.2020.09.009 |
0.587 |
|
| 2020 |
Banta AB, Enright AL, Siletti C, Peters JM. A High-efficacy CRISPRi System for Gene Function Discovery in . Applied and Environmental Microbiology. PMID 32978126 DOI: 10.1128/AEM.01621-20 |
0.737 |
|
| 2019 |
Qu J, Prasad NK, Yu MA, Chen S, Lyden A, Herrera N, Silvis MR, Crawford E, Looney MR, Peters JM, Rosenberg OS. Modulating pathogenesis with Mobile-CRISPRi. Journal of Bacteriology. PMID 31481541 DOI: 10.1128/Jb.00304-19 |
0.535 |
|
| 2019 |
Peters JM, Koo BM, Patino R, Heussler GE, Hearne CC, Qu J, Inclan YF, Hawkins JS, Lu CHS, Silvis MR, Harden MM, Osadnik H, Peters JE, Engel JN, Dutton RJ, et al. Enabling genetic analysis of diverse bacteria with Mobile-CRISPRi. Nature Microbiology. PMID 30617347 DOI: 10.1038/S41564-018-0327-Z |
0.765 |
|
| 2018 |
Bhate MP, Lemmin T, Kuenze G, Mensa B, Ganguly S, Peters J, Schmidt N, Pelton JG, Gross C, Meiler J, DeGrado WF. Structure and function of the transmembrane domain of NsaS, an antibiotic sensing histidine kinase in S. aureus. Journal of the American Chemical Society. PMID 29771498 DOI: 10.1021/Jacs.7B09670 |
0.5 |
|
| 2018 |
Sriram R, Sun J, Villanueva-Meyer J, Mutch C, DeLos Santos J, Peters J, Korenchan DE, Neumann K, Van Criekinge M, Kurhanewicz J, Rosenberg O, Wilson D, Ohliger MA. Detection of bacteria-specific metabolism using hyperpolarized [2-13C] pyruvate. Acs Infectious Diseases. PMID 29405697 DOI: 10.1021/Acsinfecdis.7B00234 |
0.328 |
|
| 2017 |
Koo BM, Kritikos G, Farelli JD, Todor H, Tong K, Kimsey H, Wapinski I, Galardini M, Cabal A, Peters JM, Hachmann AB, Rudner DZ, Allen KN, Typas A, Gross CA. Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis. Cell Systems. PMID 28189581 DOI: 10.1016/J.Cels.2016.12.013 |
0.681 |
|
| 2016 |
Zhao H, Sun Y, Peters JM, Gross CA, Garner EC, Helmann JD. Depletion of undecaprenyl pyrophosphate phosphatases (UPP-Pases) disrupts cell envelope biogenesis in Bacillus subtilis. Journal of Bacteriology. PMID 27528508 DOI: 10.1128/Jb.00507-16 |
0.564 |
|
| 2016 |
Peters JM, Colavin A, Shi H, Czarny TL, Larson MH, Wong S, Hawkins JS, Lu CH, Koo BM, Marta E, Shiver AL, Whitehead EH, Weissman JS, Brown ED, Qi LS, et al. A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria. Cell. PMID 27238023 DOI: 10.1016/J.Cell.2016.05.003 |
0.672 |
|
| 2015 |
Peters JM, Silvis MR, Zhao D, Hawkins JS, Gross CA, Qi LS. Bacterial CRISPR: accomplishments and prospects. Current Opinion in Microbiology. 27: 121-126. PMID 26363124 DOI: 10.1016/J.Mib.2015.08.007 |
0.642 |
|
| 2015 |
Gray AN, Koo BM, Shiver AL, Peters JM, Osadnik H, Gross CA. High-throughput bacterial functional genomics in the sequencing era. Current Opinion in Microbiology. 27: 86-95. PMID 26336012 DOI: 10.1016/J.Mib.2015.07.012 |
0.589 |
|
| 2015 |
Hawkins JS, Wong S, Peters JM, Almeida R, Qi LS. Targeted Transcriptional Repression in Bacteria Using CRISPR Interference (CRISPRi). Methods in Molecular Biology (Clifton, N.J.). 1311: 349-62. PMID 25981485 DOI: 10.1007/978-1-4939-2687-9_23 |
0.513 |
|
| 2015 |
Gray AN, Koo BM, Shiver AL, Peters JM, Osadnik H, Gross CA. High-throughput bacterial functional genomics in the sequencing era Current Opinion in Microbiology. 27: 86-95. DOI: 10.1016/j.mib.2015.07.012 |
0.518 |
|
| 2014 |
Haft RJ, Keating DH, Schwaegler T, Schwalbach MS, Vinokur J, Tremaine M, Peters JM, Kotlajich MV, Pohlmann EL, Ong IM, Grass JA, Kiley PJ, Landick R. Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria. Proceedings of the National Academy of Sciences of the United States of America. 111: E2576-85. PMID 24927582 DOI: 10.1073/Pnas.1401853111 |
0.54 |
|
| 2014 |
Larson MH, Mooney RA, Peters JM, Windgassen T, Nayak D, Gross CA, Block SM, Greenleaf WJ, Landick R, Weissman JS. A pause sequence enriched at translation start sites drives transcription dynamics in vivo. Science (New York, N.Y.). 344: 1042-7. PMID 24789973 DOI: 10.1126/Science.1251871 |
0.732 |
|
| 2012 |
Peters JM, Mooney RA, Grass JA, Jessen ED, Tran F, Landick R. Rho and NusG suppress pervasive antisense transcription in Escherichia coli. Genes & Development. 26: 2621-33. PMID 23207917 DOI: 10.1101/Gad.196741.112 |
0.697 |
|
| 2011 |
Peters JM, Vangeloff AD, Landick R. Bacterial transcription terminators: the RNA 3'-end chronicles. Journal of Molecular Biology. 412: 793-813. PMID 21439297 DOI: 10.1016/J.Jmb.2011.03.036 |
0.647 |
|
| 2009 |
Peters JM, Mooney RA, Kuan PF, Rowland JL, Keles S, Landick R. Rho directs widespread termination of intragenic and stable RNA transcription. Proceedings of the National Academy of Sciences of the United States of America. 106: 15406-11. PMID 19706412 DOI: 10.1073/Pnas.0903846106 |
0.727 |
|
| 2009 |
Mooney RA, Davis SE, Peters JM, Rowland JL, Ansari AZ, Landick R. Regulator trafficking on bacterial transcription units in vivo. Molecular Cell. 33: 97-108. PMID 19150431 DOI: 10.1016/J.Molcel.2008.12.021 |
0.721 |
|
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