Karissa Y. Sanbonmatsu

Affiliations: 
Los Alamos National Laboratory, Los Alamos, NM, United States 
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"Karissa Sanbonmatsu"

Parents

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Martin V. Goldman grad student 1997 CU Boulder (Physics Tree)

Collaborators

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Jonathan D. Dinman collaborator 2015-2017 LANL
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Publications

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Kim DN, Moriarty NW, Kirmizialtin S, et al. (2019) cryo_fit: Democratization of Flexible Fitting for Cryo-EM. Journal of Structural Biology
Gulay SP, Bista S, Varshney A, et al. (2017) Tracking fluctuation hotspots on the yeast ribosome through the elongation cycle. Nucleic Acids Research
Krishnamurthy M, Hennelly SP, Dale T, et al. (2015) Tunable Riboregulator Switches for Post-transcriptional Control of Gene Expression. Acs Synthetic Biology
Kirmizialtin S, Loerke J, Behrmann E, et al. (2015) Using Molecular Simulation to Model High-Resolution Cryo-EM Reconstructions. Methods in Enzymology. 558: 497-514
Kirmizialtin S, Hennelly SP, Schug A, et al. (2015) Integrating molecular dynamics simulations with chemical probing experiments using SHAPE-FIT. Methods in Enzymology. 553: 215-34
Muhs M, Hilal T, Mielke T, et al. (2015) Cryo-Em Structures of Ribosomal 80S Complexes with Termination Factors and Cricket Paralysis Virus Ires Reveal the Ires in the Translocated State Molecular Cell. 57: 422
Hayes RL, Noel JK, Mandic A, et al. (2015) Generalized Manning Condensation Model Captures the RNA Ion Atmosphere Physical Review Letters. 114
Kaushal PS, Sharma MR, Booth TM, et al. (2015) Correction: Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome (Proceedings of the National Academy of Sciences of the United States of America (2014) 111, 20 (7284-7289) DOI: 10.1073/pnas.1401657111) Proceedings of the National Academy of Sciences of the United States of America. 112: E2736
Budkevich TV, Giesebrecht J, Behrmann E, et al. (2014) Regulation of the mammalian elongation cycle by subunit rolling: a eukaryotic-specific ribosome rearrangement. Cell. 158: 121-31
Kaushal PS, Sharma MR, Booth TM, et al. (2014) Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome. Proceedings of the National Academy of Sciences of the United States of America. 111: 7284-9
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