Wen-Ping Hsieh, Ph.D. - Publications

Affiliations: 
North Carolina State University, Raleigh, NC 
Area:
Evolutionary Genomics

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Tai AS, Peng CH, Peng SC, Hsieh WP. Decomposing the subclonal structure of tumors with two-way mixture models on copy number aberrations. Plos One. 13: e0206579. PMID 30540749 DOI: 10.1371/Journal.Pone.0206579  0.307
2018 Liao KH, Hon WK, Tang CY, Hsieh WP. MetaSMC: A Coalescent-based Shotgun Sequence Simulator for Evolving Microbial Populations. Bioinformatics (Oxford, England). PMID 30321266 DOI: 10.1093/Bioinformatics/Bty840  0.316
2014 Tsai PW, Cheng YL, Hsieh WP, Lan CY. Responses of Candida albicans to the human antimicrobial peptide LL-37. Journal of Microbiology (Seoul, Korea). 52: 581-9. PMID 24879350 DOI: 10.1007/S12275-014-3630-2  0.3
2014 Lin YJ, Chen YT, Hsu SN, Peng CH, Tang CY, Yen TC, Hsieh WP. HaplotypeCN: copy number haplotype inference with Hidden Markov Model and localized haplotype clustering. Plos One. 9: e96841. PMID 24849202 DOI: 10.1371/Journal.Pone.0096841  0.332
2014 Tsai PW, Chen YT, Yang CY, Chen HF, Tan TS, Lin TW, Hsieh WP, Lan CY. The role of Mss11 in Candida albicans biofilm formation. Molecular Genetics and Genomics : Mgg. 289: 807-19. PMID 24752399 DOI: 10.1007/S00438-014-0846-0  0.308
2014 Peng CH, Jiang YZ, Tai AS, Liu CB, Peng SC, Liao CT, Yen TC, Hsieh WP. Causal inference of gene regulation with subnetwork assembly from genetical genomics data. Nucleic Acids Research. 42: 2803-19. PMID 24322297 DOI: 10.1093/Nar/Gkt1277  0.359
2013 Lin YJ, Chang CT, Tang CY, Hsieh WP. Simpute: an efficient solution for dense genotypic data. Biomed Research International. 2013: 813912. PMID 23509783 DOI: 10.1155/2013/813912  0.304
2012 Chen YT, Lin CY, Tsai PW, Yang CY, Hsieh WP, Lan CY. Rhb1 regulates the expression of secreted aspartic protease 2 through the TOR signaling pathway in Candida albicans. Eukaryotic Cell. 11: 168-82. PMID 22194462 DOI: 10.1128/Ec.05200-11  0.326
2011 Peng CH, Liao CT, Peng SC, Chen YJ, Cheng AJ, Juang JL, Tsai CY, Chen TC, Chuang YJ, Tang CY, Hsieh WP, Yen TC. A novel molecular signature identified by systems genetics approach predicts prognosis in oral squamous cell carcinoma. Plos One. 6: e23452. PMID 21853135 DOI: 10.1371/journal.pone.0023452  0.303
2011 Hsu JT, Peng CH, Hsieh WP, Lan CY, Tang CY. A novel method to identify cooperative functional modules: study of module coordination in the Saccharomyces cerevisiae cell cycle. Bmc Bioinformatics. 12: 281. PMID 21749690 DOI: 10.1186/1471-2105-12-281  0.326
2011 Hsieh WP, Chu TM, Lin YM, Wolfinger RD. Kernel density weighted loess normalization improves the performance of detection within asymmetrical data. Bmc Bioinformatics. 12: 222. PMID 21631915 DOI: 10.1186/1471-2105-12-222  0.373
2010 Wang YC, Lan CY, Hsieh WP, Murillo LA, Agabian N, Chen BS. Global screening of potential Candida albicans biofilm-related transcription factors via network comparison. Bmc Bioinformatics. 11: 53. PMID 20102611 DOI: 10.1186/1471-2105-11-53  0.305
2008 Chang CS, Li YH, Chen LT, Chen WC, Hsieh WP, Shin J, Jane WN, Chou SJ, Choi G, Hu JM, Somerville S, Wu SH. LZF1, a HY5-regulated transcriptional factor, functions in Arabidopsis de-etiolation. The Plant Journal : For Cell and Molecular Biology. 54: 205-19. PMID 18182030 DOI: 10.1111/J.1365-313X.2008.03401.X  0.301
2007 Hsieh WP, Passador-Gurgel G, Stone EA, Gibson G. Mixture modeling of transcript abundance classes in natural populations. Genome Biology. 8: R98. PMID 17547747 DOI: 10.1186/Gb-2007-8-6-R98  0.548
2007 Passador-Gurgel G, Hsieh WP, Hunt P, Deighton N, Gibson G. Quantitative trait transcripts for nicotine resistance in Drosophila melanogaster. Nature Genetics. 39: 264-8. PMID 17237783 DOI: 10.1038/ng1944  0.553
2006 Tsai S, Mir B, Martin AC, Estrada JL, Bischoff SR, Hsieh WP, Cassady JP, Freking BA, Nonneman DJ, Rohrer GA, Piedrahita JA. Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. Bmc Genomics. 7: 328. PMID 17194308 DOI: 10.1186/1471-2164-7-328  0.366
2003 Hsieh WP, Chu TM, Wolfinger RD, Gibson G. Mixed-model reanalysis of primate data suggests tissue and species biases in oligonucleotide-based gene expression profiles. Genetics. 165: 747-57. PMID 14573485  0.466
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