Navin Rauniyar, Ph.D. - Publications

2010 Biochemistry and Molecular Biology University of North Texas Health Science Center at Fort Worth 

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Rauniyar N, Togle AJ, Ronci RA, Reyes D, Han X. Characterization of PEGylation sites in Neulasta and a biosimilar candidate with a combined fragmentation strategy in mass spectrometry analysis. Journal of Mass Spectrometry : Jms. 59: e5017. PMID 38517094 DOI: 10.1002/jms.5017  0.325
2019 Wilson RS, Rauniyar N, Sakaue F, Lam TT, Williams KR, Nairn AC. Development of Targeted Mass Spectrometry-Based Approaches for Quantitation of Proteins Enriched in the Postsynaptic Density (PSD). Proteomes. 7. PMID 30986977 DOI: 10.3390/Proteomes7020012  0.473
2018 Luxmi R, Blaby-Haas C, Kumar D, Rauniyar N, King SM, Mains RE, Eipper BA. Proteases Shape the Secretome: Comparison to Classical Neuropeptide Processing Machinery. Proteomes. 6. PMID 30249063 DOI: 10.3390/Proteomes6040036  0.373
2017 Janostiak R, Rauniyar N, Lam TT, Ou J, Zhu LJ, Green MR, Wajapeyee N. MELK Promotes Melanoma Growth by Stimulating the NF-κB Pathway. Cell Reports. 21: 2829-2841. PMID 29212029 DOI: 10.1016/J.Celrep.2017.11.033  0.322
2017 Subramanian K, Rauniyar N, Lavalleé-Adam M, Yates JR, Balch WE. Quantitative Analysis of the Proteome Response to the Histone Deacetylase Inhibitor (HDACi) Vorinostat in Niemann-Pick Type C1 disease. Molecular & Cellular Proteomics : McP. PMID 28860124 DOI: 10.1074/Mcp.M116.064949  0.362
2017 Srivastava R, Mannam P, Rauniyar N, Lam TT, Luo R, Lee PJ, Srivastava A. Proteomics data on MAP Kinase Kinase 3 knock out bone marrow derived macrophages exposed to cigarette smoke extract. Data in Brief. 13: 320-325. PMID 28653025 DOI: 10.1016/J.Dib.2017.05.049  0.37
2017 Rauniyar N, Peng G, Lam TT, Zhao H, Mor G, Williams KR. Data-Independent Acquisition and Parallel Reaction Monitoring Mass Spectrometry Identification of Serum Biomarkers for Ovarian Cancer. Biomarker Insights. 12: 1177271917710948. PMID 28615921 DOI: 10.1177/1177271917710948  0.328
2017 Conkar D, Culfa E, Odabasi E, Rauniyar N, Yates JR, Firat-Karalar EN. Centriolar satellite protein CCDC66 interacts with CEP290 and functions in cilium formation and trafficking. Journal of Cell Science. PMID 28235840 DOI: 10.1242/Jcs.196832  0.389
2016 Mannam P, Rauniyar N, Lam TT, Luo R, Lee PJ, Srivastava A. MKK3 influences mitophagy and is involved in cigarette smoke-induced inflammation. Free Radical Biology & Medicine. PMID 27717867 DOI: 10.1016/J.Freeradbiomed.2016.10.001  0.307
2015 Rauniyar N. Parallel Reaction Monitoring: A Targeted Experiment Performed Using High Resolution and High Mass Accuracy Mass Spectrometry. International Journal of Molecular Sciences. 16: 28566-81. PMID 26633379 DOI: 10.3390/Ijms161226120  0.356
2015 Waadt R, Manalansan B, Rauniyar N, Munemasa S, Booker MA, Brandt B, Waadt C, Nusinow DA, Kay SA, Kunz HH, Schumacher K, DeLong A, Yates JR, Schroeder JI. Identification of Open Stomata1-Interacting Proteins Reveals Interactions with Sucrose Non-fermenting1-Related Protein Kinases2 and with Type 2A Protein Phosphatases That Function in Abscisic Acid Responses. Plant Physiology. 169: 760-79. PMID 26175513 DOI: 10.1104/Pp.15.00575  0.391
2015 Rauniyar N, Subramanian K, Lavallée-Adam M, Martínez-Bartolomé S, Balch WE, Yates JR. Quantitative Proteomics of Human Fibroblasts with I1061T Mutation in Niemann-Pick C1 (NPC1) Protein Provides Insights into the Disease Pathogenesis. Molecular & Cellular Proteomics : McP. 14: 1734-49. PMID 25873482 DOI: 10.1074/Mcp.M114.045609  0.401
2014 Rauniyar N, Yates JR. Isobaric labeling-based relative quantification in shotgun proteomics. Journal of Proteome Research. 13: 5293-309. PMID 25337643 DOI: 10.1021/Pr500880B  0.421
2014 Lavallée-Adam M, Rauniyar N, McClatchy DB, Yates JR. PSEA-Quant: a protein set enrichment analysis on label-free and label-based protein quantification data. Journal of Proteome Research. 13: 5496-509. PMID 25177766 DOI: 10.1021/Pr500473N  0.432
2014 Rauniyar N, Gupta V, Balch WE, Yates JR. Quantitative proteomic profiling reveals differentially regulated proteins in cystic fibrosis cells. Journal of Proteome Research. 13: 4668-75. PMID 24818864 DOI: 10.1021/Pr500370G  0.344
2014 Park SK, Aslanian A, McClatchy DB, Han X, Shah H, Singh M, Rauniyar N, Moresco JJ, Pinto AF, Diedrich JK, Delahunty C, Yates JR. Census 2: isobaric labeling data analysis. Bioinformatics (Oxford, England). 30: 2208-9. PMID 24681903 DOI: 10.1093/Bioinformatics/Btu151  0.395
2014 Firat-Karalar EN, Rauniyar N, Yates JR, Stearns T. Proximity interactions among centrosome components identify regulators of centriole duplication. Current Biology : Cb. 24: 664-70. PMID 24613305 DOI: 10.1016/J.Cub.2014.01.067  0.374
2013 Nagaprashantha LD, Talamantes T, Singhal J, Guo J, Vatsyayan R, Rauniyar N, Awasthi S, Singhal SS, Prokai L. Proteomic analysis of signaling network regulation in renal cell carcinomas with differential hypoxia-inducible factor-2α expression. Plos One. 8: e71654. PMID 23940778 DOI: 10.1371/Journal.Pone.0071654  0.556
2013 Rauniyar N, McClatchy DB, Yates JR. Stable isotope labeling of mammals (SILAM) for in vivo quantitative proteomic analysis. Methods (San Diego, Calif.). 61: 260-8. PMID 23523555 DOI: 10.1016/J.Ymeth.2013.03.008  0.407
2013 Rauniyar N, Gao B, McClatchy DB, Yates JR. Comparison of protein expression ratios observed by sixplex and duplex TMT labeling method. Journal of Proteome Research. 12: 1031-9. PMID 23214967 DOI: 10.1021/Pr3008896  0.448
2012 Rauniyar N, Prokai L. Mass Spectrometry-Based Methods to Investigate Posttranslational Protein Modifications by Lipid Peroxidation Products Mass Spectrometry Handbook. 23-40. DOI: 10.1002/9781118180730.ch2  0.575
2011 Rauniyar N, Prokai L. Isotope-coded dimethyl tagging for differential quantification of posttranslational protein carbonylation by 4-hydroxy-2-nonenal, an end-product of lipid peroxidation. Journal of Mass Spectrometry : Jms. 46: 976-85. PMID 22012663 DOI: 10.1002/Jms.1978  0.623
2011 Guo J, Prokai-Tatrai K, Nguyen V, Rauniyar N, Ughy B, Prokai L. Protein targets for carbonylation by 4-hydroxy-2-nonenal in rat liver mitochondria. Journal of Proteomics. 74: 2370-9. PMID 21801862 DOI: 10.1016/J.Jprot.2011.07.009  0.615
2010 Chaudhary P, Sharma R, Sharma A, Vatsyayan R, Yadav S, Singhal SS, Rauniyar N, Prokai L, Awasthi S, Awasthi YC. Mechanisms of 4-hydroxy-2-nonenal induced pro- and anti-apoptotic signaling. Biochemistry. 49: 6263-75. PMID 20565132 DOI: 10.1021/Bi100517X  0.536
2010 Rauniyar N, Prokai-Tatrai K, Prokai L. Identification of carbonylation sites in apomyoglobin after exposure to 4-hydroxy-2-nonenal by solid-phase enrichment and liquid chromatography-electrospray ionization tandem mass spectrometry. Journal of Mass Spectrometry : Jms. 45: 398-410. PMID 20222068 DOI: 10.1002/Jms.1725  0.626
2009 Rauniyar N, Prokai L. Detection and identification of 4-hydroxy-2-nonenal Schiff-base adducts along with products of Michael addition using data-dependent neutral loss-driven MS3 acquisition: method evaluation through an in vitro study on cytochrome c oxidase modifications. Proteomics. 9: 5188-93. PMID 19771555 DOI: 10.1002/Pmic.200900116  0.615
2009 Prokai L, Stevens SM, Rauniyar N, Nguyen V. Rapid label-free identification of estrogen-induced differential protein expression in vivo from mouse brain and uterine tissue. Journal of Proteome Research. 8: 3862-71. PMID 19545149 DOI: 10.1021/Pr900083V  0.599
2009 Dasgupta S, Wasson LM, Rauniyar N, Prokai L, Borejdo J, Vishwanatha JK. Novel gene C17orf37 in 17q12 amplicon promotes migration and invasion of prostate cancer cells. Oncogene. 28: 2860-72. PMID 19503095 DOI: 10.1038/Onc.2009.145  0.492
2009 Rauniyar N, Stevens SM, Prokai-Tatrai K, Prokai L. Characterization of 4-hydroxy-2-nonenal-modified peptides by liquid chromatography-tandem mass spectrometry using data-dependent acquisition: neutral loss-driven MS3 versus neutral loss-driven electron capture dissociation. Analytical Chemistry. 81: 782-9. PMID 19072288 DOI: 10.1021/Ac802015M  0.607
2007 Stevens SM, Rauniyar N, Prokai L. Rapid characterization of covalent modifications to rat brain mitochondrial proteins after ex vivo exposure to 4-hydroxy-2-nonenal by liquid chromatography-tandem mass spectrometry using data-dependent and neutral loss-driven MS3 acquisition. Journal of Mass Spectrometry : Jms. 42: 1599-605. PMID 18085542 DOI: 10.1002/Jms.1349  0.649
2007 Rauniyar N, Stevens SM, Prokai L. Fourier transform ion cyclotron resonance mass spectrometry of covalent adducts of proteins and 4-hydroxy-2-nonenal, a reactive end-product of lipid peroxidation. Analytical and Bioanalytical Chemistry. 389: 1421-8. PMID 17805520 DOI: 10.1007/S00216-007-1534-2  0.594
2007 Prokai-Tatrai K, Rivera-Portalatin NM, Rauniyar N, Prokai L. A facile microwave-assisted synthesis of p-quinols by lead(IV) acetate oxidation Letters in Organic Chemistry. 4: 265-267. DOI: 10.2174/157017807781024200  0.499
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