| Year |
Citation |
Score |
| 2023 |
Reese JC. New roles for elongation factors in RNA polymerase II ubiquitylation and degradation. Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms. 194956. PMID 37331651 DOI: 10.1016/j.bbagrm.2023.194956 |
0.376 |
|
| 2021 |
Akinniyi OT, Reese JC. DEF1: Much more than an RNA polymerase degradation factor. Dna Repair. 107: 103202. PMID 34419700 DOI: 10.1016/j.dnarep.2021.103202 |
0.342 |
|
| 2020 |
Huynh MT, Yadav SP, Reese JC, Lee TH. Nucleosome Dynamics during Transcription Elongation. Acs Chemical Biology. PMID 33263994 DOI: 10.1021/acschembio.0c00617 |
0.447 |
|
| 2019 |
Reese JC. Analysis of RNAPII complexes. Methods (San Diego, Calif.). 159: 1-3. PMID 31181258 DOI: 10.1016/J.Ymeth.2019.06.007 |
0.332 |
|
| 2019 |
Jiang H, Wolgast M, Beebe LM, Reese JC. Ccr4-Not maintains genomic integrity by controlling the ubiquitylation and degradation of arrested RNAPII. Genes & Development. PMID 30948432 DOI: 10.1101/Gad.322453.118 |
0.528 |
|
| 2019 |
Brooks Crickard J, Reese JC. Biochemical Methods to Characterize RNA Polymerase II Elongation Complexes. Methods (San Diego, Calif.). PMID 30684536 DOI: 10.1016/J.Ymeth.2019.01.011 |
0.539 |
|
| 2019 |
Lee J, Crickard JB, Reese JC, Lee TH. Single-molecule FRET method to investigate the dynamics of transcription elongation through the nucleosome by RNA polymerase II. Methods (San Diego, Calif.). PMID 30660864 DOI: 10.1016/J.Ymeth.2019.01.009 |
0.586 |
|
| 2018 |
Boguta M, Reese JC. Regulation of tRNA synthesis and modification in physiological conditions and disease. Biochimica Et Biophysica Acta. PMID 29551749 DOI: 10.1016/J.Bbagrm.2018.03.004 |
0.332 |
|
| 2017 |
Miller JE, Zhang L, Jiang H, Li Y, Pugh BF, Reese JC. Genome-Wide Mapping of Decay Factor-mRNA Interactions in Yeast Identifies Nutrient Responsive Transcripts as Targets of the Deadenylase Ccr4. G3 (Bethesda, Md.). PMID 29158339 DOI: 10.1534/G3.117.300415 |
0.456 |
|
| 2017 |
Crickard JB, Lee J, Lee TH, Reese JC. The elongation factor Spt4/5 regulates RNA polymerase II transcription through the nucleosome. Nucleic Acids Research. PMID 28379497 DOI: 10.1093/Nar/Gkx220 |
0.576 |
|
| 2016 |
Crickard JB, Fu J, Reese JC. Biochemical Analysis of Yeast Suppressor of Ty 4/5 (Spt4/5) Reveals the importance of Nucleic Acid Interactions in the Prevention of RNA Polymerase II Arrest. The Journal of Biological Chemistry. PMID 26945063 DOI: 10.1074/Jbc.M116.716001 |
0.559 |
|
| 2015 |
Dutta A, Babbarwal V, Fu J, Brunke-Reese D, Libert DM, Willis J, Reese JC. Ccr4-Not and TFIIS Function Cooperatively To Rescue Arrested RNA Polymerase II. Molecular and Cellular Biology. 35: 1915-25. PMID 25776559 DOI: 10.1128/Mcb.00044-15 |
0.717 |
|
| 2014 |
Babbarwal V, Fu J, Reese JC. The Rpb4/7 module of RNA polymerase II is required for carbon catabolite repressor protein 4-negative on TATA (Ccr4-not) complex to promote elongation. The Journal of Biological Chemistry. 289: 33125-30. PMID 25315781 DOI: 10.1074/Jbc.C114.601088 |
0.507 |
|
| 2014 |
Collart MA, Reese JC. Gene expression as a circular process: cross-talk between transcription and mRNA degradation in eukaryotes; International University of Andalusia (UNIA) Baeza, Spain. Rna Biology. 11: 320-3. PMID 24646520 DOI: 10.4161/Rna.28037 |
0.566 |
|
| 2014 |
Zheng S, Crickard JB, Srikanth A, Reese JC. A highly conserved region within H2B is important for FACT to act on nucleosomes. Molecular and Cellular Biology. 34: 303-14. PMID 24248595 DOI: 10.1128/Mcb.00478-13 |
0.705 |
|
| 2013 |
Bhargava P, Reese JC. Transcription by Odd Pols. Biochimica Et Biophysica Acta. 1829: 249-50. PMID 23411050 DOI: 10.1016/J.Bbagrm.2013.02.001 |
0.514 |
|
| 2013 |
Reese JC. The control of elongation by the yeast Ccr4-not complex. Biochimica Et Biophysica Acta. 1829: 127-33. PMID 22975735 DOI: 10.1016/J.Bbagrm.2012.09.001 |
0.545 |
|
| 2012 |
Miller JE, Reese JC. Ccr4-Not complex: the control freak of eukaryotic cells. Critical Reviews in Biochemistry and Molecular Biology. 47: 315-33. PMID 22416820 DOI: 10.3109/10409238.2012.667214 |
0.541 |
|
| 2011 |
Dutta A, Zheng S, Jain D, Cameron CE, Reese JC. Intermolecular interactions within the abundant DEAD-box protein Dhh1 regulate its activity in vivo. The Journal of Biological Chemistry. 286: 27454-70. PMID 21642421 DOI: 10.1074/Jbc.M111.220251 |
0.728 |
|
| 2011 |
Kruk JA, Dutta A, Fu J, Gilmour DS, Reese JC. The multifunctional Ccr4-Not complex directly promotes transcription elongation. Genes & Development. 25: 581-93. PMID 21406554 DOI: 10.1101/Gad.2020911 |
0.771 |
|
| 2010 |
Miao J, Fan Q, Cui L, Li X, Wang H, Ning G, Reese JC, Cui L. The MYST family histone acetyltransferase regulates gene expression and cell cycle in malaria parasite Plasmodium falciparum. Molecular Microbiology. 78: 883-902. PMID 20807207 DOI: 10.1111/J.1365-2958.2010.07371.X |
0.487 |
|
| 2010 |
Zheng S, Wyrick JJ, Reese JC. Novel trans-tail regulation of H2B ubiquitylation and H3K4 methylation by the N terminus of histone H2A. Molecular and Cellular Biology. 30: 3635-45. PMID 20498280 DOI: 10.1128/Mcb.00324-10 |
0.687 |
|
| 2010 |
Zhang S, Shukle R, Mittapalli O, Zhu YC, Reese JC, Wang H, Hua BZ, Chen MS. The gut transcriptome of a gall midge, Mayetiola destructor. Journal of Insect Physiology. 56: 1198-206. PMID 20346948 DOI: 10.1016/J.Jinsphys.2010.03.021 |
0.303 |
|
| 2010 |
Krajewski WA, Reese JC. SET domains of histone methyltransferases recognize ISWI-remodeled nucleosomal species. Molecular and Cellular Biology. 30: 552-64. PMID 19752191 DOI: 10.1128/Mcb.00775-09 |
0.479 |
|
| 2009 |
Psathas JN, Zheng S, Tan S, Reese JC. Set2-dependent K36 methylation is regulated by novel intratail interactions within H3. Molecular and Cellular Biology. 29: 6413-26. PMID 19822661 DOI: 10.1128/Mcb.00876-09 |
0.736 |
|
| 2009 |
Trazzi S, Perini G, Bernardoni R, Zoli M, Reese JC, Musacchio A, Della Valle G. The C-terminal domain of CENP-C displays multiple and critical functions for mammalian centromere formation. Plos One. 4: e5832. PMID 19503796 DOI: 10.1371/Journal.Pone.0005832 |
0.381 |
|
| 2009 |
Tomar RS, Psathas JN, Zhang H, Zhang Z, Reese JC. A novel mechanism of antagonism between ATP-dependent chromatin remodeling complexes regulates RNR3 expression. Molecular and Cellular Biology. 29: 3255-65. PMID 19349301 DOI: 10.1128/Mcb.01741-08 |
0.785 |
|
| 2009 |
Reese J, Tan S. Preface to special issue on epigenetics. Biochimica Et Biophysica Acta. 1789: 1-2. PMID 19056063 DOI: 10.1016/J.Bbagrm.2008.11.003 |
0.335 |
|
| 2008 |
Reese JC, Zhang H, Zhang Z. Isolation of highly purified yeast nuclei for nuclease mapping of chromatin structure. Methods in Molecular Biology (Clifton, N.J.). 463: 43-53. PMID 18951159 DOI: 10.1007/978-1-59745-406-3_3 |
0.647 |
|
| 2008 |
Zhang H, Kruk JA, Reese JC. Dissection of coactivator requirement at RNR3 reveals unexpected contributions from TFIID and SAGA. The Journal of Biological Chemistry. 283: 27360-8. PMID 18682387 DOI: 10.1074/Jbc.M803831200 |
0.801 |
|
| 2008 |
Tomar RS, Zheng S, Brunke-Reese D, Wolcott HN, Reese JC. Yeast Rap1 contributes to genomic integrity by activating DNA damage repair genes. The Embo Journal. 27: 1575-84. PMID 18480842 DOI: 10.1038/Emboj.2008.93 |
0.684 |
|
| 2008 |
Sharma VM, Tomar RS, Dempsey AE, Reese JC. Histone deacetylases RPD3 and HOS2 regulate the transcriptional activation of DNA damage-inducible genes (Molecular and Cellular Biology (2007) 27, 8 (3199-3210)) Molecular and Cellular Biology. 28: 1427. DOI: 10.1128/MCB.02199-07 |
0.467 |
|
| 2007 |
Zhang H, Reese JC. Exposing the core promoter is sufficient to activate transcription and alter coactivator requirement at RNR3. Proceedings of the National Academy of Sciences of the United States of America. 104: 8833-8. PMID 17502614 DOI: 10.1073/Pnas.0701666104 |
0.634 |
|
| 2007 |
Sharma VM, Tomar RS, Dempsey AE, Reese JC. Histone deacetylases RPD3 and HOS2 regulate the transcriptional activation of DNA damage-inducible genes. Molecular and Cellular Biology. 27: 3199-210. PMID 17296735 DOI: 10.1128/Mcb.02311-06 |
0.65 |
|
| 2006 |
Zhang Z, Reese JC. Isolation of yeast nuclei and micrococcal nuclease mapping of nucleosome positioning. Methods in Molecular Biology (Clifton, N.J.). 313: 245-55. PMID 16118438 DOI: 10.1385/1-59259-958-3:245 |
0.624 |
|
| 2005 |
Ercan S, Reese JC, Workman JL, Simpson RT. Yeast recombination enhancer is stimulated by transcription activation. Molecular and Cellular Biology. 25: 7976-87. PMID 16135790 DOI: 10.1128/Mcb.25.18.7976-7987.2005 |
0.504 |
|
| 2005 |
Zhang Z, Reese JC. Molecular genetic analysis of the yeast repressor Rfx1/Crt1 reveals a novel two-step regulatory mechanism. Molecular and Cellular Biology. 25: 7399-411. PMID 16107689 DOI: 10.1128/Mcb.25.17.7399-7411.2005 |
0.699 |
|
| 2004 |
Zhang Z, Reese JC. Redundant mechanisms are used by Ssn6-Tup1 in repressing chromosomal gene transcription in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 279: 39240-50. PMID 15254041 DOI: 10.1074/Jbc.M407159200 |
0.737 |
|
| 2004 |
Bergkessel M, Reese JC. An essential role for the Saccharomyces cerevisiae DEAD-box helicase DHH1 in G1/S DNA-damage checkpoint recovery. Genetics. 167: 21-33. PMID 15166134 DOI: 10.1534/Genetics.167.1.21 |
0.346 |
|
| 2004 |
Zhang Z, Reese JC. Ssn6-Tup1 requires the ISW2 complex to position nucleosomes in Saccharomyces cerevisiae. The Embo Journal. 23: 2246-57. PMID 15116071 DOI: 10.1038/Sj.Emboj.7600227 |
0.713 |
|
| 2003 |
Reese JC, Green MR. Functional analysis of TFIID components using conditional mutants. Methods in Enzymology. 370: 415-30. PMID 14712664 DOI: 10.1016/S0076-6879(03)70036-6 |
0.566 |
|
| 2003 |
Reese JC. Basal transcription factors. Current Opinion in Genetics & Development. 13: 114-8. PMID 12672487 DOI: 10.1016/S0959-437X(03)00013-3 |
0.517 |
|
| 2003 |
Sharma VM, Li B, Reese JC. SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery. Genes & Development. 17: 502-15. PMID 12600943 DOI: 10.1101/Gad.1039503 |
0.608 |
|
| 2002 |
Kulesza CA, Van Buskirk HA, Cole MD, Reese JC, Smith MM, Engel DA. Adenovirus E1A requires the yeast SAGA histone acetyltransferase complex and associates with SAGA components Gcn5 and Tra1. Oncogene. 21: 1411-22. PMID 11857084 DOI: 10.1038/Sj.Onc.1205201 |
0.552 |
|
| 2001 |
Durso RJ, Fisher AK, Albright-Frey TJ, Reese JC. Analysis of TAF90 mutants displaying allele-specific and broad defects in transcription. Molecular and Cellular Biology. 21: 7331-44. PMID 11585915 DOI: 10.1128/Mcb.21.21.7331-7344.2001 |
0.557 |
|
| 2001 |
Reese JC, Green MR. Genetic analysis of TAF68/61 reveals links to cell cycle regulators Yeast. 18: 1197-1205. PMID 11561287 DOI: 10.1002/Yea.761 |
0.388 |
|
| 2001 |
Hassan AH, Neely KE, Vignali M, Reese JC, Workman JL. Promoter targeting of chromatin-modifying complexes. Frontiers in Bioscience : a Journal and Virtual Library. 6: D1054-64. PMID 11532604 |
0.534 |
|
| 2001 |
Li B, Reese JC. Ssn6-Tup1 Regulates RNR3 by Positioning Nucleosomes and Affecting the Chromatin Structure at the Upstream Repression Sequence Journal of Biological Chemistry. 276: 33788-33797. PMID 11448965 DOI: 10.1074/Jbc.M104220200 |
0.592 |
|
| 2001 |
Stitzel ML, Durso R, Reese JC. The proteasome regulates the UV-induced activation of the AP-1-like transcription factor Gcn4. Genes & Development. 15: 128-33. PMID 11157770 DOI: 10.1101/Gad.863801 |
0.518 |
|
| 2000 |
Li B, Reese JC. Derepression of DNA damage-regulated genes requires yeast TAF(II)s Embo Journal. 19: 4091-4100. PMID 10921889 DOI: 10.1093/Emboj/19.15.4091 |
0.56 |
|
| 2000 |
Reese JC, Zhang Z, Kurpad H. Identification of a yeast transcription factor IID subunit, TSG2/TAF48. The Journal of Biological Chemistry. 275: 17391-8. PMID 10751405 DOI: 10.1074/Jbc.M001635200 |
0.683 |
|
| 1998 |
Grant PA, Schieltz D, Pray-Grant MG, Steger DJ, Reese JC, Yates JR, Workman JL. A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation. Cell. 94: 45-53. PMID 9674426 DOI: 10.1016/S0092-8674(00)81220-9 |
0.57 |
|
| 1997 |
Walker SS, Shen WC, Reese JC, Apone LM, Green MR. Yeast TAF(II)145 required for transcription of G1/S cyclin genes and regulated by the cellular growth state. Cell. 90: 607-14. PMID 9288741 DOI: 10.1016/S0092-8674(00)80522-X |
0.49 |
|
| 1997 |
Gadbois EL, Chao DM, Reese JC, Green MR, Young RA. Functional antagonism between RNA polymerase II holoenzyme and global negative regulator NC2 in vivo. Proceedings of the National Academy of Sciences of the United States of America. 94: 3145-50. PMID 9096360 DOI: 10.1073/Pnas.94.7.3145 |
0.532 |
|
| 1996 |
Apone LM, Virbasius CMA, Reese JC, Green MR. Yeast TAF(II)90 is required for cell-cycle progression through G2/M but not for general transcription activation Genes and Development. 10: 2368-2380. PMID 8824595 DOI: 10.1101/Gad.10.18.2368 |
0.438 |
|
| 1996 |
Walker SS, Reese JC, Apone LM, Green MR. Transcription activation in cells lacking TAFIIS. Nature. 383: 185-8. PMID 8774886 DOI: 10.1038/383185A0 |
0.571 |
|
| 1994 |
Reese JC, Apone L, Walker SS, Griffin LA, Green MR. Yeast TAFIIS in a multisubunit complex required for activated transcription. Nature. 371: 523-7. PMID 7935765 DOI: 10.1038/371523A0 |
0.598 |
|
| 1993 |
Katzenellenbogen BS, Bhardwaj B, Fang H, Ince BA, Pakde F, Reese JC, Schodin D, Wrenn CK. Hormone binding and transcription activation by estrogen receptors: Analyses using mammalian and yeast systems Journal of Steroid Biochemistry and Molecular Biology. 47: 39-48. PMID 8274440 DOI: 10.1016/0960-0760(93)90055-2 |
0.359 |
|
| 1993 |
Katzenellenbogen BS, Fang H, Ince BA, Pakdel F, Reese JC, Wooge CH, Wrenn CK. Estrogen receptors: Ligand discrimination and antiestrogen action Breast Cancer Research and Treatment. 27: 17-26. PMID 8260727 DOI: 10.1007/Bf00683190 |
0.341 |
|
| 1993 |
Pakdel F, Reese JC, Katzenellenbogen BS. Identification of charged residues in an N-terminal portion of the hormone-binding domain of the human estrogen receptor important in transcriptional activity of the receptor Molecular Endocrinology. 7: 1408-1417. PMID 8114756 DOI: 10.1210/Mend.7.11.8114756 |
0.391 |
|
| 1992 |
Reese JC, Wooge CH, Katzenellenbogen BS. Identification of two cysteines closely positioned in the ligand-binding pocket of the human estrogen receptor: Roles in ligand binding and transcriptional activation Molecular Endocrinology. 6: 2160-2166. PMID 1491695 DOI: 10.1210/Mend.6.12.1491695 |
0.33 |
|
| 1992 |
Reese JC, Katzenellenbogen BS. Examination of the DNA-Binding Ability of Estrogen Receptor in Whole Cells: Implications for Hormone-Independent Transactivation and the Actions of Antiestrogens Molecular and Cellular Biology. 12: 4531-4538. PMID 1406642 DOI: 10.1128/mcb.12.10.4531-4538.1992 |
0.425 |
|
| 1991 |
Reese JC, Katzenellenbogen BS. Differential DNA-binding abilites of estrogen receptor occupied with two classes of antiestrogens: Studies using human estrogen receptor overexpressed in mammalian cells Nucleic Acids Research. 19: 6595-6602. PMID 1754396 DOI: 10.1093/Nar/19.23.6595 |
0.336 |
|
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