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Yong Wang - Publications

Affiliations: 
The University of Hong Kong, Hong Kong Island, Hong Kong, Hong Kong 
Area:
Condensed Matter Physics
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53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang Y, Huang JM, Zhou YL, Almeida A, Finn RD, Danchin A, He LS. Phylogenomics of expanding uncultured environmental Tenericutes provides insights into their pathogenicity and evolutionary relationship with Bacilli. Bmc Genomics. 21: 408. PMID 32552739 DOI: 10.1186/S12864-020-06807-4  0.316
2020 Wei Z, Li W, Li J, Chen J, Xin Y, He L, Wang Y. Multiple in situ Nucleic Acid Collections (MISNAC) From Deep-Sea Waters Frontiers in Marine Science. 7. DOI: 10.3389/Fmars.2020.00081  0.353
2019 Kou Q, Meland K, Li X, He L, Wang Y. "Unicorn from Hades", a new genus of Mysidae (Malacostraca: Mysida) from the Mariana Trench, with a systematic analysis of the deep-sea mysids. Molecular Phylogenetics and Evolution. 106666. PMID 31669817 DOI: 10.1016/J.Ympev.2019.106666  0.301
2019 Gao ZM, Huang JM, Cui GJ, Li WL, Li J, Wei ZF, Chen J, Xin YZ, Cai DS, Zhang AQ, Wang Y. In situ meta-omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench. Environmental Microbiology. PMID 31344308 DOI: 10.1111/1462-2920.14759  0.359
2019 Huang JM, Wang Y. Genomic differences within the phylum Marinimicrobia: From waters to sediments in the Mariana Trench. Marine Genomics. 100699. PMID 31301991 DOI: 10.1016/J.Margen.2019.100699  0.342
2019 Cui G, Li J, Gao Z, Wang Y. Spatial variations of microbial communities in abyssal and hadal sediments across the Challenger Deep. Peerj. 7: e6961. PMID 31149407 DOI: 10.7717/Peerj.6961  0.337
2019 Huang JM, Baker BJ, Li JT, Wang Y. New microbial lineages capable of carbon fixation and nutrient cycling in deep-sea sediments of the northern South China Sea. Applied and Environmental Microbiology. PMID 31126943 DOI: 10.1128/Aem.00523-19  0.366
2019 Kou Q, Meland K, Li X, He L, Wang Y. Deepest record of Eucopia sculpticauda (Crustacea: Lophogastrida: Eucopiidae) and the order, with new insights into the distribution and genetic diversity of the species Bulletin of Marine Science. 95: 327-335. DOI: 10.5343/Bms.2018.0074  0.307
2018 Wang Y, Huang JM, Cui GJ, Nunoura T, Takaki Y, Li WL, Li J, Gao ZM, Takai K, Zhang AQ, Stepanauskas R. Genomics insights into ecotype formation of ammonia-oxidizing archaea in the deep ocean. Environmental Microbiology. PMID 30592124 DOI: 10.1111/1462-2920.14518  0.315
2018 Li WL, Huang JM, Zhang PW, Cui GJ, Wei ZF, Wu YZ, Gao ZM, Han Z, Wang Y. Periodic and spatial spreading of alkanes and bacteria in deep waters of the Mariana Trench. Applied and Environmental Microbiology. PMID 30446553 DOI: 10.1128/Aem.02089-18  0.336
2018 Wu Y, Qiu JW, Qian PY, Wang Y. The vertical distribution of prokaryotes in the surface sediment of Jiaolong cold seep at the northern South China Sea. Extremophiles : Life Under Extreme Conditions. PMID 29442249 DOI: 10.1007/S00792-018-1012-0  0.325
2018 Wang Y, Zhu FC, He LS, Danchin A. Unique tRNA gene profile suggests paucity of nucleotide modifications in anticodons of a deep-sea symbiotic Spiroplasma. Nucleic Acids Research. PMID 29390076 DOI: 10.1093/Nar/Gky045  0.332
2017 Yan G, Zhang G, Huang J, Lan Y, Sun J, Zeng C, Wang Y, Qian PY, He L. Comparative Transcriptomic Analysis Reveals Candidate Genes and Pathways Involved in Larval Settlement of the Barnacle Megabalanus volcano. International Journal of Molecular Sciences. 18. PMID 29077039 DOI: 10.3390/Ijms18112253  0.308
2017 He LS, Zhang PW, Huang JM, Zhu FC, Danchin A, Wang Y. The enigmatic genome of an obligate ancient Spiroplasma symbiont in a hadal holothurian. Applied and Environmental Microbiology. PMID 29054873 DOI: 10.1128/Aem.01965-17  0.364
2017 Gao ZM, Zhou GW, Huang H, Wang Y. The Cyanobacteria-Dominated Sponge Dactylospongia elegans in the South China Sea: Prokaryotic Community and Metagenomic Insights. Frontiers in Microbiology. 8: 1387. PMID 28790992 DOI: 10.3389/Fmicb.2017.01387  0.375
2017 Speth DR, Lagkouvardos I, Wang Y, Qian PY, Dutilh BE, Jetten MS. Draft Genome of Scalindua rubra, Obtained from the Interface Above the Discovery Deep Brine in the Red Sea, Sheds Light on Potential Salt Adaptation Strategies in Anammox Bacteria. Microbial Ecology. PMID 28074246 DOI: 10.1007/S00248-017-0929-7  0.382
2016 Wang Y, Huang JM, Wang SL, Gao ZM, Zhang AQ, Danchin A, He LS. Genomic characterization of symbiotic mycoplasmas from the stomach of deep-sea isopod Bathynomus sp. Environmental Microbiology. PMID 27312602 DOI: 10.1111/1462-2920.13411  0.366
2016 Yang B, Wang Y, Qian PY. Sensitivity and correlation of hypervariable regions in 16S rRNA genes in phylogenetic analysis. Bmc Bioinformatics. 17: 135. PMID 27000765 DOI: 10.1186/S12859-016-0992-Y  0.308
2016 Wang Y, Li TG, Wang MY, Lai QL, Li JT, Gao ZM, Shao ZZ, Qian PY. Archive of bacterial community in anhydrite crystals from a deep-sea basin provides evidence of past oil-spilling in a benthic environment in the Red Sea Biogeosciences. 13: 6405-6417. DOI: 10.5194/Bg-13-6405-2016  0.336
2016 Wang Y, Gao Z, Xu Y, Li G, He L, Qian P. An evaluation of multiple annealing and looping based genome amplification using a synthetic bacterial community Acta Oceanologica Sinica. 35: 131-136. DOI: 10.1007/S13131-015-0781-X  0.32
2016 Wang Y, Gao ZM, Li JT, Bougouffa S, Tian RM, Bajic VB, Qian PY. Draft genome of an Aerophobetes bacterium reveals a facultative lifestyle in deep-sea anaerobic sediments Science Bulletin. 61: 1176-1186. DOI: 10.1007/S11434-016-1135-6  0.357
2015 Wang Y, Li JT, He LS, Yang B, Gao ZM, Cao HL, Batang Z, Al-Suwailem A, Qian PY. Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea). Plos One. 10: e0140766. PMID 26485717 DOI: 10.1371/Journal.Pone.0140766  0.326
2015 Cao H, Zhang W, Wang Y, Qian PY. Microbial community changes along the active seepage site of one cold seep in the Red Sea. Frontiers in Microbiology. 6: 739. PMID 26284035 DOI: 10.3389/Fmicb.2015.00739  0.354
2015 Zhang W, Wang Y, Bougouffa S, Tian R, Cao H, Li Y, Cai L, Wong YH, Zhang G, Zhou G, Zhang X, Bajic VB, Al-Suwailem A, Qian PY. Synchronized dynamics of bacterial niche-specific functions during biofilm development in a cold seep brine pool. Environmental Microbiology. PMID 26171930 DOI: 10.1111/1462-2920.12978  0.351
2015 Yang B, Zhang W, Tian R, Wang Y, Qian PY. Changing composition of microbial communities indicates seepage fluid difference of the Thuwal Seeps in the Red Sea. Antonie Van Leeuwenhoek. PMID 26059861 DOI: 10.1007/S10482-015-0499-Y  0.348
2014 Tian RM, Lee OO, Wang Y, Cai L, Bougouffa S, Chiu JM, Wu RS, Qian PY. Effect of polybrominated diphenyl ether (PBDE) treatment on the composition and function of the bacterial community in the sponge Haliclona cymaeformis. Frontiers in Microbiology. 5: 799. PMID 25642227 DOI: 10.3389/Fmicb.2014.00799  0.339
2014 Tian RM, Wang Y, Bougouffa S, Gao ZM, Cai L, Zhang WP, Bajic V, Qian PY. Effect of copper treatment on the composition and function of the bacterial community in the sponge Haliclona cymaeformis. Mbio. 5: e01980. PMID 25370493 DOI: 10.1128/Mbio.01980-14  0.351
2014 Zhang WP, Wang Y, Tian RM, Bougouffa S, Yang B, Cao HL, Zhang G, Wong YH, Xu W, Batang Z, Al-Suwailem A, Zhang XX, Qian PY. Species sorting during biofilm assembly by artificial substrates deployed in a cold seep system. Scientific Reports. 4: 6647. PMID 25323200 DOI: 10.1038/Srep06647  0.339
2014 Tian RM, Wang Y, Bougouffa S, Gao ZM, Cai L, Bajic V, Qian PY. Genomic analysis reveals versatile heterotrophic capacity of a potentially symbiotic sulfur-oxidizing bacterium in sponge. Environmental Microbiology. 16: 3548-61. PMID 25088944 DOI: 10.1111/1462-2920.12586  0.35
2014 Gao ZM, Wang Y, Lee OO, Tian RM, Wong YH, Bougouffa S, Batang Z, Al-Suwailem A, Lafi FF, Bajic VB, Qian PY. Pyrosequencing reveals the microbial communities in the Red Sea sponge Carteriospongia foliascens and their impressive shifts in abnormal tissues. Microbial Ecology. 68: 621-32. PMID 24760170 DOI: 10.1007/S00248-014-0419-0  0.314
2014 Zhang W, Bougouffa S, Wang Y, Lee OO, Yang J, Chan C, Song X, Qian PY. Toward understanding the dynamics of microbial communities in an estuarine system. Plos One. 9: e94449. PMID 24732211 DOI: 10.1371/Journal.Pone.0094449  0.331
2014 Gao ZM, Wang Y, Tian RM, Wong YH, Batang ZB, Al-Suwailem AM, Bajic VB, Qian PY. Symbiotic adaptation drives genome streamlining of the cyanobacterial sponge symbiont "Candidatus Synechococcus spongiarum". Mbio. 5: e00079-14. PMID 24692632 DOI: 10.1128/Mbio.00079-14  0.318
2014 Wang Y, Tian RM, Gao ZM, Bougouffa S, Qian PY. Optimal eukaryotic 18S and universal 16S/18S ribosomal RNA primers and their application in a study of symbiosis. Plos One. 9: e90053. PMID 24594623 DOI: 10.1371/Journal.Pone.0090053  0.335
2014 Wang Y, Zhang WP, Cao HL, Shek CS, Tian RM, Wong YH, Batang Z, Al-Suwailem A, Qian PY. Diversity and distribution of eukaryotic microbes in and around a brine pool adjacent to the Thuwal cold seeps in the Red Sea. Frontiers in Microbiology. 5: 37. PMID 24575081 DOI: 10.3389/Fmicb.2014.00037  0.359
2014 Cao H, Wang Y, Lee OO, Zeng X, Shao Z, Qian PY. Microbial sulfur cycle in two hydrothermal chimneys on the Southwest Indian Ridge. Mbio. 5: e00980-13. PMID 24473131 DOI: 10.1128/Mbio.00980-13  0.35
2014 Lee OO, Chung HC, Yang J, Wang Y, Dash S, Wang H, Qian PY. Molecular techniques revealed highly diverse microbial communities in natural marine biofilms on polystyrene dishes for invertebrate larval settlement. Microbial Ecology. 68: 81-93. PMID 24402362 DOI: 10.1007/S00248-013-0348-3  0.338
2014 Lee OO, Wang Y, Tian R, Zhang W, Shek CS, Bougouffa S, Al-Suwailem A, Batang ZB, Xu W, Wang GC, Zhang X, Lafi FF, Bajic VB, Qian PY. In situ environment rather than substrate type dictates microbial community structure of biofilms in a cold seep system. Scientific Reports. 4: 3587. PMID 24399144 DOI: 10.1038/Srep03587  0.304
2014 Zhang M, Wang Y, Li B, Guo C, Huang G, Shen G, Zhou X. Small mammal community succession on the beach of Dongting Lake, China after the Three Gorges Project Integrative Zoology. 9: 294-308. PMID 24148252 DOI: 10.1111/1749-4877.12073  0.313
2013 Wang Y, Lee OO, Yang JK, Li TG, Qian PY. Artifactual pyrosequencing reads in multiple-displacement-amplified sediment metagenomes from the Red Sea. Peerj. 1: e69. PMID 23646288 DOI: 10.7717/Peerj.69  0.324
2013 Wang Y, Cao H, Zhang G, Bougouffa S, Lee OO, Al-Suwailem A, Qian PY. Autotrophic microbe metagenomes and metabolic pathways differentiate adjacent Red Sea brine pools. Scientific Reports. 3: 1748. PMID 23624511 DOI: 10.1038/Srep01748  0.307
2013 Bougouffa S, Yang JK, Lee OO, Wang Y, Batang Z, Al-Suwailem A, Qian PY. Distinctive microbial community structure in highly stratified deep-sea brine water columns. Applied and Environmental Microbiology. 79: 3425-37. PMID 23542623 DOI: 10.1128/Aem.00254-13  0.341
2013 Arellano SM, Lee OO, Lafi FF, Yang J, Wang Y, Young CM, Qian PY. Deep sequencing of Myxilla (Ectyomyxilla) methanophila, an epibiotic sponge on cold-seep tubeworms, reveals methylotrophic, thiotrophic, and putative hydrocarbon-degrading microbial associations. Microbial Ecology. 65: 450-61. PMID 23052927 DOI: 10.1007/S00248-012-0130-Y  0.348
2012 Lee OO, Yang J, Bougouffa S, Wang Y, Batang Z, Tian R, Al-Suwailem A, Qian PY. Spatial and species variations in bacterial communities associated with corals from the Red Sea as revealed by pyrosequencing. Applied and Environmental Microbiology. 78: 7173-84. PMID 22865078 DOI: 10.1128/Aem.01111-12  0.346
2011 Wang Y, Yang JK, Lee OO, Li TG, Al-Suwailem A, Danchin A, Qian PY. Bacterial niche-specific genome expansion is coupled with highly frequent gene disruptions in deep-sea sediments. Plos One. 6: e29149. PMID 22216192 DOI: 10.1371/Journal.Pone.0029149  0.355
2011 Wang Y, Yang J, Lee OO, Dash S, Lau SC, Al-Suwailem A, Wong TY, Danchin A, Qian PY. Hydrothermally generated aromatic compounds are consumed by bacteria colonizing in Atlantis II Deep of the Red Sea. The Isme Journal. 5: 1652-9. PMID 21525946 DOI: 10.1038/Ismej.2011.42  0.317
2011 Lee OO, Wang Y, Yang J, Lafi FF, Al-Suwailem A, Qian PY. Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea. The Isme Journal. 5: 650-64. PMID 21085196 DOI: 10.1038/Ismej.2010.165  0.351
2011 Qian PY, Wang Y, Lee OO, Lau SCK, Yang J, Lafi FF, Al-Suwailem A, Wong TYH. Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing Isme Journal. 5: 507-518. PMID 20668490 DOI: 10.1038/Ismej.2010.112  0.336
2009 Wang Y, Qian P. Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies. Plos One. 4. PMID 19816594 DOI: 10.1371/Journal.Pone.0007401  0.314
2009 Wang Y, Leung FCC. Discovery of a long inverted repeat in human POTE genes Genomics. 94: 278-283. PMID 19463943 DOI: 10.1016/J.Ygeno.2009.05.005  0.306
2009 Wang Y, Leung FCC. A study on genomic distribution and sequence features of human long inverted repeats reveals species-specific intronic inverted repeats. Febs Journal. 276: 1986-1998. PMID 19243432 DOI: 10.1111/J.1742-4658.2009.06930.X  0.34
2008 Wang Y, Zeng F, Hon CC, Zhang Y, Leung FC. The mitochondrial genome of the Basidiomycete fungus Pleurotus ostreatus (oyster mushroom). Fems Microbiology Letters. 280: 34-41. PMID 18248422 DOI: 10.1111/J.1574-6968.2007.01048.X  0.304
2004 Wang Y, Rocha EP, Leung FC, Danchin A. Cytosine methylation is not the major factor inducing CpG dinucleotide deficiency in bacterial genomes. Journal of Molecular Evolution. 58: 692-700. PMID 15461426 DOI: 10.1007/S00239-004-2591-1  0.315
2004 Wang Y, Leung FCC. An evaluation of new criteria for CpG islands in the human genome as gene markers Bioinformatics. 20: 1170-1177. PMID 14764558 DOI: 10.1093/Bioinformatics/Bth059  0.303
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