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Andrew Y. Gracey - Publications

Affiliations: 
Biology University of Southern California, Los Angeles, CA, United States 
Area:
Molecular Biology
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Hall MR, Moffett JW, Gracey AY. RNAseq Reveals Sensitive, Concentration-Dependent Transcriptional Markers of Copper in Mytilus californianus Larvae and Adults Frontiers in Marine Science. 7. DOI: 10.3389/Fmars.2020.572496  0.386
2020 Connor K, Gracey AY. Cycles of heat and aerial-exposure induce changes in the transcriptome related to cell regulation and metabolism in Mytilus californianus Marine Biology. 167. DOI: 10.1007/S00227-020-03750-6  0.448
2018 Mandic M, Ramon ML, Gerstein AC, Gracey AY, Richards JG. Variable gene transcription underlies phenotypic convergence of hypoxia tolerance in sculpins. Bmc Evolutionary Biology. 18: 163. PMID 30390629 DOI: 10.1186/S12862-018-1275-1  0.403
2016 Gracey AY, Connor K. Transcriptional and metabolomic characterization of spontaneous metabolic cycles in Mytilus californianus under subtidal conditions. Marine Genomics. PMID 27538734 DOI: 10.1016/J.Margen.2016.07.004  0.341
2015 Lockwood BL, Connor KM, Gracey AY. The environmentally tuned transcriptomes of Mytilus mussels. The Journal of Experimental Biology. 218: 1822-1833. PMID 26085660 DOI: 10.1242/Jeb.118190  0.437
2014 Rodriguez D, Sanders EN, Farell K, Langenbacher AD, Taketa DA, Hopper MR, Kennedy M, Gracey A, De Tomaso AW. Analysis of the basal chordate Botryllus schlosseri reveals a set of genes associated with fertility. Bmc Genomics. 15: 1183. PMID 25542255 DOI: 10.1186/1471-2164-15-1183  0.393
2014 Mandic M, Ramon ML, Gracey AY, Richards JG. Divergent transcriptional patterns are related to differences in hypoxia tolerance between the intertidal and the subtidal sculpins. Molecular Ecology. 23: 6091-103. PMID 25370158 DOI: 10.1111/Mec.12991  0.435
2014 Sakamaki K, Shimizu K, Iwata H, Imai K, Satou Y, Funayama N, Nozaki M, Yajima M, Nishimura O, Higuchi M, Chiba K, Yoshimoto M, Kimura H, Gracey AY, Shimizu T, et al. The apoptotic initiator caspase-8: its functional ubiquity and genetic diversity during animal evolution. Molecular Biology and Evolution. 31: 3282-301. PMID 25205508 DOI: 10.1093/Molbev/Msu260  0.335
2013 Nydam ML, Netuschil N, Sanders E, Langenbacher A, Lewis DD, Taketa DA, Marimuthu A, Gracey AY, De Tomaso AW. The candidate histocompatibility locus of a Basal chordate encodes two highly polymorphic proteins. Plos One. 8: e65980. PMID 23826085 DOI: 10.1371/Journal.Pone.0065980  0.405
2012 Connor KM, Gracey AY. High-resolution analysis of metabolic cycles in the intertidal mussel Mytilus californianus. American Journal of Physiology. Regulatory, Integrative and Comparative Physiology. 302: R103-11. PMID 22012695 DOI: 10.1152/Ajpregu.00453.2011  0.306
2011 Connor KM, Gracey AY. Circadian cycles are the dominant transcriptional rhythm in the intertidal mussel Mytilus californianus. Proceedings of the National Academy of Sciences of the United States of America. 108: 16110-5. PMID 21911390 DOI: 10.1073/Pnas.1111076108  0.401
2011 Gracey AY, Lee TH, Higashi RM, Fan T. Hypoxia-induced mobilization of stored triglycerides in the euryoxic goby Gillichthys mirabilis. The Journal of Experimental Biology. 214: 3005-12. PMID 21865512 DOI: 10.1242/Jeb.059907  0.406
2011 Chaney ML, Gracey AY. Mass mortality in Pacific oysters is associated with a specific gene expression signature. Molecular Ecology. 20: 2942-54. PMID 21672066 DOI: 10.1111/J.1365-294X.2011.05152.X  0.31
2009 Li W, Gracey AY, Mello LV, Brass A, Cossins AR. ExprAlign--the identification of ESTs in non-model species by alignment of cDNA microarray expression profiles. Bmc Genomics. 10: 560. PMID 19939286 DOI: 10.1186/1471-2164-10-560  0.369
2009 Li W, Olohan L, Williams D, Hughes M, Gracey A, Cossins A. Application of ESTs in microarray analysis. Methods of Molecular Biology. 533: 289-309. PMID 19277566 DOI: 10.1007/978-1-60327-136-3_14  0.425
2009 Fedorov VB, Goropashnaya AV, Tøien O, Stewart NC, Gracey AY, Chang C, Qin S, Pertea G, Quackenbush J, Showe LC, Showe MK, Boyer BB, Barnes BM. Elevated expression of protein biosynthesis genes in liver and muscle of hibernating black bears (Ursus americanus). Physiological Genomics. 37: 108-18. PMID 19240299 DOI: 10.1152/Physiolgenomics.90398.2008  0.428
2008 Gracey AY, Chaney ML, Boomhower JP, Tyburczy WR, Connor K, Somero GN. Rhythms of gene expression in a fluctuating intertidal environment. Current Biology : Cb. 18: 1501-7. PMID 18848447 DOI: 10.1016/J.Cub.2008.08.049  0.404
2008 Evans H, De Tomaso T, Quail M, Rogers J, Gracey AY, Cossins AR, Berenbrink M. Ancient and modern duplication events and the evolution of stearoyl-CoA desaturases in teleost fishes. Physiological Genomics. 35: 18-29. PMID 18593860 DOI: 10.1152/Physiolgenomics.90266.2008  0.407
2008 Gracey AY. The Gillichthys mirabilis Cooper array: a platform to investigate the molecular basis of phenotypic plasticity Journal of Fish Biology. 72: 2118-2132. DOI: 10.1111/J.1095-8649.2008.01903.X  0.414
2008 Olohan LA, Li W, Wulff T, Jarmer H, Gracey AY, Cossins AR. Detection of anoxia‐responsive genes in cultured cells of the rainbow trout Oncorhynchus mykiss (Walbaum), using an optimized, genome‐wide oligoarray Journal of Fish Biology. 72: 2170-2186. DOI: 10.1111/J.1095-8649.2008.01877.X  0.388
2008 Williams DR, Li W, Hughes MA, Gonzalez SF, Vernon C, Vidal MC, Jeney Z, Jeney G, Dixon P, McAndrew B, Bartfai R, Orban L, Trudeau V, Rogers J, Matthews L, ... ... Gracey AY, et al. Genomic resources and microarrays for the common carp Cyprinus carpio L Journal of Fish Biology. 72: 2095-2117. DOI: 10.1111/J.1095-8649.2008.01875.X  0.384
2008 Cossins AR, Sneddon LU, Gracey AY. Post-genomic and discovery-driven approaches to abiotic environmental stress adaptation in fish Comparative Biochemistry and Physiology C-Toxicology & Pharmacology. 148: 451. DOI: 10.1016/J.Cbpc.2008.10.017  0.312
2007 McLean L, Young IS, Doherty MK, Robertson DH, Cossins AR, Gracey AY, Beynon RJ, Whitfield PD. Global cooling: cold acclimation and the expression of soluble proteins in carp skeletal muscle. Proteomics. 7: 2667-81. PMID 17623276 DOI: 10.1002/Pmic.200601004  0.312
2007 Gracey AY. Interpreting physiological responses to environmental change through gene expression profiling. The Journal of Experimental Biology. 210: 1584-92. PMID 17449823 DOI: 10.1242/Jeb.004333  0.468
2007 Murray P, Hayward SA, Govan GG, Gracey AY, Cossins AR. An explicit test of the phospholipid saturation hypothesis of acquired cold tolerance in Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America. 104: 5489-94. PMID 17369360 DOI: 10.1073/Pnas.0609590104  0.303
2007 Hayward SA, Murray PA, Gracey AY, Cossins AR. Beyond the lipid hypothesis: mechanisms underlying phenotypic plasticity in inducible cold tolerance. Advances in Experimental Medicine and Biology. 594: 132-42. PMID 17205681 DOI: 10.1007/978-0-387-39975-1_12  0.37
2006 Buckley BA, Gracey AY, Somero GN. The cellular response to heat stress in the goby Gillichthys mirabilis: a cDNA microarray and protein-level analysis. The Journal of Experimental Biology. 209: 2660-77. PMID 16809457 DOI: 10.1242/Jeb.02292  0.469
2006 Cossins A, Fraser J, Hughes M, Gracey A. Post-genomic approaches to understanding the mechanisms of environmentally induced phenotypic plasticity. The Journal of Experimental Biology. 209: 2328-36. PMID 16731809 DOI: 10.1242/Jeb.02256  0.498
2006 Fraser J, de Mello LV, Ward D, Rees HH, Williams DR, Fang Y, Fang Y, Brass A, Gracey AY, Cossins AR. Hypoxia-inducible myoglobin expression in nonmuscle tissues. Proceedings of the National Academy of Sciences of the United States of America. 103: 2977-81. PMID 16469844 DOI: 10.1073/Pnas.0508270103  0.373
2004 Gracey AY, Fraser EJ, Li W, Fang Y, Taylor RR, Rogers J, Brass A, Cossins AR. Coping with cold: An integrative, multitissue analysis of the transcriptome of a poikilothermic vertebrate. Proceedings of the National Academy of Sciences of the United States of America. 101: 16970-5. PMID 15550548 DOI: 10.1073/Pnas.0403627101  0.482
2003 Gracey AY, Cossins AR. Application of microarray technology in environmental and comparative physiology. Annual Review of Physiology. 65: 231-59. PMID 12471169 DOI: 10.1146/Annurev.Physiol.65.092101.142716  0.443
2002 Cossins AR, Murray PA, Gracey AY, Logue J, Polley S, Caddick M, Brooks S, Postle T, Maclean N. The role of desaturases in cold-induced lipid restructuring. Biochemical Society Transactions. 30: 1082-6. PMID 12440978 DOI: 10.1042/Bst0301082  0.343
2002 Cossins AR, Murray PA, Gracey AY. Environmentally-induced regulation of acyl-CoA desaturase genes Biochemical Society Transactions. 30. DOI: 10.1042/Bst030A103A  0.425
1999 Gracey AY, Trueman RA, Polley S, Tiku PE, Caddick M, Cossins AR. Thermal regulation of cellular membrane structure: cold-induced expression of Δ9-desaturases Comparative Biochemistry and Physiology a-Molecular & Integrative Physiology. 124. DOI: 10.1016/S1095-6433(99)90098-3  0.313
1996 Tiku PE, Gracey AY, Macartney AI, Beynon RJ, Cossins AR. Cold-Induced Expression of Δ9-Desaturase in Carp by Transcriptional and Posttranslational Mechanisms Science. 271: 815-818. PMID 8629000 DOI: 10.1126/Science.271.5250.815  0.407
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