| Year |
Citation |
Score |
| 2018 |
Kumar N, Peterson VM, Zhang KX, Li L, Garrett-Engele PW, Moniz RJ, Klappenbach JA. Abstract LB-012: Single cell RNA-sequencing of multiple myeloma clinical patients for identifying novel immuno-oncology drug targets Cancer Research. 78. DOI: 10.1158/1538-7445.Am2018-Lb-012 |
0.329 |
|
| 2017 |
Peterson VM, Zhang KX, Kumar N, Wong J, Li L, Wilson DC, Moore R, McClanahan TK, Sadekova S, Klappenbach JA. Multiplexed quantification of proteins and transcripts in single cells. Nature Biotechnology. PMID 28854175 DOI: 10.1038/Nbt.3973 |
0.318 |
|
| 2015 |
Bai J, Smock SL, Jackson GR, MacIsaac KD, Huang Y, Mankus C, Oldach J, Roberts B, Ma YL, Klappenbach JA, Crackower MA, Alves SE, Hayden PJ. Phenotypic responses of differentiated asthmatic human airway epithelial cultures to rhinovirus. Plos One. 10: e0118286. PMID 25706956 DOI: 10.1371/Journal.Pone.0118286 |
0.337 |
|
| 2011 |
Caro-Quintero A, Deng J, Auchtung J, Brettar I, Höfle MG, Klappenbach J, Konstantinidis KT. Unprecedented levels of horizontal gene transfer among spatially co-occurring Shewanella bacteria from the Baltic Sea. The Isme Journal. 5: 131-40. PMID 20596068 DOI: 10.1038/Ismej.2010.93 |
0.367 |
|
| 2010 |
Ayala-del-Río HL, Chain PS, Grzymski JJ, Ponder MA, Ivanova N, Bergholz PW, Di Bartolo G, Hauser L, Land M, Bakermans C, Rodrigues D, Klappenbach J, Zarka D, Larimer F, Richardson P, et al. The genome sequence of Psychrobacter arcticus 273-4, a psychroactive Siberian permafrost bacterium, reveals mechanisms for adaptation to low-temperature growth. Applied and Environmental Microbiology. 76: 2304-12. PMID 20154119 DOI: 10.1128/Aem.02101-09 |
0.313 |
|
| 2010 |
Blackman SC, Podtelezhnikov A, Railkar RA, Loboda A, Tanis K, Klappenbach JA, Watters J, Iannone R, Herman G, Bergstrom DA. Abstract 26: Notch pathway inhibition with MK-0752 leads to dose- and time-dependent transcriptional alterations in proliferation, PI3K, andWntpathway genes in plucked human hair follicles Cancer Research. 70: 26-26. DOI: 10.1158/1538-7445.Am10-26 |
0.352 |
|
| 2009 |
Blackman SC, Klappenbach JA, Railkar RA, Tanis K, Podtelezhnikov A, Loboda A, Dai X, Hing J, Stone J, Harman A, Hardwick J, Iannone R, Bergstrom D. Abstract B41: Identification of a time‐ and dose‐responsive transcriptional signature of Notch pathway inhibition in plucked human hair follicles following exposure to the gamma‐secretase inhibitor MK‐0752 Molecular Cancer Therapeutics. 8. DOI: 10.1158/1535-7163.Targ-09-B41 |
0.355 |
|
| 2007 |
Goris J, Konstantinidis KT, Klappenbach JA, Coenye T, Vandamme P, Tiedje JM. DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. International Journal of Systematic and Evolutionary Microbiology. 57: 81-91. PMID 17220447 DOI: 10.1099/Ijs.0.64483-0 |
0.306 |
|
| 2007 |
Stedtfeld RD, Wick LM, Baushke SW, Tourlousse DM, Herzog AB, Xia Y, Rouillard JM, Klappenbach JA, Cole JR, Gulari E, Tiedje JM, Hashsham SA. Influence of dangling ends and surface-proximal tails of targets on probe-target duplex formation in 16S rRNA gene-based diagnostic arrays. Applied and Environmental Microbiology. 73: 380-9. PMID 17114322 DOI: 10.1128/Aem.01785-06 |
0.316 |
|
| 2005 |
Beliaev AS, Klingeman DM, Klappenbach JA, Wu L, Romine MF, Tiedje JM, Nealson KH, Fredrickson JK, Zhou J. Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors. Journal of Bacteriology. 187: 7138-45. PMID 16199584 DOI: 10.1128/Jb.187.20.7138-7145.2005 |
0.31 |
|
| 2005 |
Kolker E, Picone AF, Galperin MY, Romine MF, Higdon R, Makarova KS, Kolker N, Anderson GA, Qiu X, Auberry KJ, Babnigg G, Beliaev AS, Edlefsen P, Elias DA, Gorby YA, ... ... Klappenbach JA, et al. Global profiling of Shewanella oneidensis MR-1: expression of hypothetical genes and improved functional annotations. Proceedings of the National Academy of Sciences of the United States of America. 102: 2099-104. PMID 15684069 DOI: 10.1073/Pnas.0409111102 |
0.387 |
|
| 2001 |
Klappenbach JA, Saxman PR, Cole JR, Schmidt TM. rrndb: the Ribosomal RNA Operon Copy Number Database. Nucleic Acids Research. 29: 181-4. PMID 11125085 DOI: 10.1093/Nar/29.1.181 |
0.392 |
|
| 2000 |
Klappenbach JA, Dunbar JM, Schmidt TM. rRNA operon copy number reflects ecological strategies of bacteria. Applied and Environmental Microbiology. 66: 1328-33. PMID 10742207 DOI: 10.1128/Aem.66.4.1328-1333.2000 |
0.445 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2004 |
Klappenbach JA, Pierson BK. Phylogenetic and physiological characterization of a filamentous anoxygenic photoautotrophic bacterium ' Candidatus Chlorothrix halophila' gen. nov., sp. nov., recovered from hypersaline microbial mats. Archives of Microbiology. 181: 17-25. PMID 14655000 DOI: 10.1007/S00203-003-0615-7 |
0.297 |
|
| 2016 |
Tanis KQ, Podtelezhnikov AA, Blackman SC, Hing J, Railkar RA, Lunceford J, Klappenbach JA, Wei B, Harman A, Camargo LM, Shah S, Finney EM, Hardwick JS, Loboda A, Watters J, et al. An Accessible Pharmacodynamic Transcriptional Biomarker for Notch Target Engagement. Clinical Pharmacology and Therapeutics. PMID 26765077 DOI: 10.1002/Cpt.335 |
0.293 |
|
| 2007 |
Cruz-García C, Murray AE, Klappenbach JA, Stewart V, Tiedje JM. Respiratory nitrate ammonification by Shewanella oneidensis MR-1. Journal of Bacteriology. 189: 656-62. PMID 17098906 DOI: 10.1128/Jb.01194-06 |
0.264 |
|
| 2014 |
Gil MA, Caniga M, Woodhouse JD, Eckman J, Lee HH, Salmon M, Naber J, Hamilton VT, Sevilla RS, Bettano K, Klappenbach J, Moy L, Correll CC, Gervais FG, Siliphaivanh P, et al. Anti-inflammatory actions of Chemoattractant Receptor-homologous molecule expressed on Th2 by the antagonist MK-7246 in a novel rat model of Alternaria alternata elicited pulmonary inflammation. European Journal of Pharmacology. 743: 106-16. PMID 25261040 DOI: 10.1016/J.Ejphar.2014.09.021 |
0.261 |
|
| 2017 |
Siu T, Brubaker J, Fuller P, Torres L, Zeng H, Close J, Mampreian DM, Shi F, Liu D, Fradera X, Johnson K, Bays N, Kadic E, He F, Goldenblatt P, ... ... Klappenbach J, et al. The Discovery of 3-((4-Chloro-3-methoxyphenyl)amino)-1-((3R,4S)-4-cyanotetrahydro-2H-pyran-3-yl)-1H-pyrazole-4-carboxamide, a Highly Ligand Efficient and Efficacious JAK1 Selective Inhibitor with Favorable Pharmacokinetic Properties. Journal of Medicinal Chemistry. PMID 29156136 DOI: 10.1021/Acs.Jmedchem.7B01135 |
0.259 |
|
| 2018 |
Rothman SM, Tanis KQ, Gandhi P, Malkov V, Marcus J, Pearson M, Stevens R, Gilliland J, Ware C, Mahadomrongkul V, O'Loughlin E, Zeballos G, Smith R, Howell BJ, Klappenbach J, et al. Human Alzheimer's disease gene expression signatures and immune profile in APP mouse models: a discrete transcriptomic view of Aβ plaque pathology. Journal of Neuroinflammation. 15: 256. PMID 30189875 DOI: 10.1186/S12974-018-1265-7 |
0.254 |
|
| 2013 |
Lieber GB, Fernandez X, Mingo GG, Jia Y, Caniga M, Gil MA, Keshwani S, Woodhouse JD, Cicmil M, Moy LY, Kelly N, Jimenez J, Crawley Y, Anthes JC, Klappenbach J, et al. Mineralocorticoid receptor antagonists attenuate pulmonary inflammation and bleomycin-evoked fibrosis in rodent models. European Journal of Pharmacology. 718: 290-8. PMID 24012780 DOI: 10.1016/J.Ejphar.2013.08.019 |
0.231 |
|
| 2015 |
Qiu P, Stevens R, Wei B, Lahser F, Howe AY, Klappenbach JA, Marton MJ. HCV genotyping from NGS short reads and its application in genotype detection from HCV mixed infected plasma. Plos One. 10: e0122082. PMID 25830316 DOI: 10.1371/Journal.Pone.0122082 |
0.228 |
|
| 2017 |
Elwood F, Witter D, Piesvaux J, Kraybill B, Bays N, Alpert C, Goldenblatt P, Qu Y, Ivanovska I, Lee HH, Chiu CS, Tang H, Scott ME, Deshmukh S, Zielstorff M, ... ... Klappenbach J, et al. Evaluation of JAK3 biology in autoimmune disease using a highly selective, irreversible JAK3 inhibitor. The Journal of Pharmacology and Experimental Therapeutics. PMID 28193636 DOI: 10.1124/Jpet.116.239723 |
0.225 |
|
| 2006 |
Denef VJ, Klappenbach JA, Patrauchan MA, Florizone C, Rodrigues JL, Tsoi TV, Verstraete W, Eltis LD, Tiedje JM. Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400. Applied and Environmental Microbiology. 72: 585-95. PMID 16391095 DOI: 10.1128/AEM.72.1.585-595.2006 |
0.167 |
|
| 2012 |
Wang YH, Trucksis M, McElwee JJ, Wong PH, Maciolek C, Thompson CD, Prueksaritanont T, Garrett GC, Declercq R, Vets E, Willson KJ, Smith RC, Klappenbach JA, Opiteck GJ, Tsou JA, et al. UGT2B17 genetic polymorphisms dramatically affect the pharmacokinetics of MK-7246 in healthy subjects in a first-in-human study. Clinical Pharmacology and Therapeutics. 92: 96-102. PMID 22669291 DOI: 10.1038/clpt.2012.20 |
0.125 |
|
| 2019 |
Rizvi NF, Santa Maria JP, Nahvi A, Klappenbach J, Klein DJ, Curran PJ, Richards MP, Chamberlin C, Saradjian P, Burchard J, Aguilar R, Lee JT, Dandliker PJ, Smith GF, Kutchukian P, et al. Targeting RNA with Small Molecules: Identification of Selective, RNA-Binding Small Molecules Occupying Drug-Like Chemical Space. Slas Discovery : Advancing Life Sciences R & D. 2472555219885373. PMID 31701793 DOI: 10.1177/2472555219885373 |
0.112 |
|
| Hide low-probability matches. |