David A.R. Sanders - Publications

Affiliations: 
University of Saskatchewan, Saskatoon, SK, Canada 
Area:
Biochemistry, protein crystallography, enzymology

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sokaribo A, Novakovski BAA, Cotelesage J, White AP, Sanders D, Goldie H. Kinetic and structural analysis of Escherichia coli phosphoenolpyruvate carboxykinase mutants. Biochimica Et Biophysica Acta. General Subjects. 129517. PMID 31911238 DOI: 10.1016/J.Bbagen.2020.129517  0.461
2017 Kuttiyatveetil JR, Sanders DA. Analysis of Plant UDP- Arabinopyranose Mutase (UAM): Role of Divalent Metals and Structure Prediction. Biochimica Et Biophysica Acta. PMID 28192204 DOI: 10.1016/J.Bbapap.2017.02.005  0.331
2016 Shi Y, Colombo C, Kuttiyatveetil JR, Zalatar N, van Straaten KE, Mohan S, Sanders DA, Pinto BM. A Second, Druggable Binding Site in UDP-Galactopyranose Mutase from Mycobacterium tuberculosis? Chembiochem : a European Journal of Chemical Biology. 17: 2264-2273. PMID 27653508 DOI: 10.1002/Cbic.201600469  0.772
2016 Sahtout N, Kuttiyatveetil JR, Fodje M, Sanders DA. Putative thioredoxin Trx1 from Thermosipho africanus strain TCF52B: expression, purification and structural determination using S-SAD. Acta Crystallographica. Section F, Structural Biology Communications. 72: 443-7. PMID 27303896 DOI: 10.1107/S2053230X16007214  0.387
2016 Skovpen YV, Conly CJ, Sanders DA, Palmer DR. Biomimetic Design Results in a Potent Allosteric Inhibitor of Dihydrodipicolinate Synthase from Campylobacter jejuni. Journal of the American Chemical Society. PMID 26836694 DOI: 10.1021/Jacs.5B12695  0.446
2016 Mahdavi-Amiri Y, Mohan S, Borrelli S, Slowski K, Sanders DA, Pinto BM. Mechanism-based candidate inhibitors of uridine diphosphate galactopyranose mutase (UGM). Carbohydrate Research. 419: 1-7. PMID 26595659 DOI: 10.1016/J.Carres.2015.10.008  0.33
2015 Kuppala R, Borrelli S, Slowski K, Sanders DA, Ravindranathan Kartha KP, Pinto BM. Synthesis and biological evaluation of nonionic substrate mimics of UDP-Galp as candidate inhibitors of UDP galactopyranose mutase (UGM). Bioorganic & Medicinal Chemistry Letters. 25: 1995-7. PMID 25819094 DOI: 10.1016/J.Bmcl.2015.03.006  0.371
2015 van Straaten KE, Kuttiyatveetil JR, Sevrain CM, Villaume SA, Jiménez-Barbero J, Linclau B, Vincent SP, Sanders DA. Structural basis of ligand binding to UDP-galactopyranose mutase from Mycobacterium tuberculosis using substrate and tetrafluorinated substrate analogues. Journal of the American Chemical Society. 137: 1230-44. PMID 25562380 DOI: 10.1021/Ja511204P  0.804
2014 Conly CJ, Skovpen YV, Li S, Palmer DR, Sanders DA. Tyrosine 110 plays a critical role in regulating the allosteric inhibition of Campylobacter jejuni dihydrodipicolinate synthase by lysine. Biochemistry. 53: 7396-406. PMID 25369463 DOI: 10.1021/bi5012157  0.416
2014 Bertwistle D, Vogt L, Aamudalapalli HB, Palmer DR, Sanders DA. Purification, crystallization and room-temperature X-ray diffraction of inositol dehydrogenase LcIDH2 from Lactobacillus casei BL23. Acta Crystallographica. Section F, Structural Biology Communications. 70: 979-83. PMID 25005103 DOI: 10.1107/S2053230X14011595  0.778
2014 Alam MK, van Straaten KE, Sanders DA, Kaminskyj SG. Aspergillus nidulans cell wall composition and function change in response to hosting several Aspergillus fumigatus UDP-galactopyranose mutase activity mutants. Plos One. 9: e85735. PMID 24454924 DOI: 10.1371/Journal.Pone.0085735  0.754
2014 Poulin MB, Shi Y, Protsko C, Dalrymple SA, Sanders DA, Pinto BM, Lowary TL. Specificity of a UDP-GalNAc pyranose-furanose mutase: a potential therapeutic target for Campylobacter jejuni infections. Chembiochem : a European Journal of Chemical Biology. 15: 47-56. PMID 24302429 DOI: 10.1002/Cbic.201300653  0.803
2014 Conly C, Skovpen Y, Palmer D, Sanders D. Allosteric Signaling in Dihydrodipicolinate Synthase Acta Crystallographica Section a Foundations and Advances. 70: C443-C443. DOI: 10.1107/S2053273314095564  0.378
2014 Sanders D, Dalrymple S, Poulin M, Zheng R, Lowary T. Structural Studies of an Novel Sugar Nucleotide Pyranose-Furanose Mutase Acta Crystallographica Section a Foundations and Advances. 70: C477-C477. DOI: 10.1107/S2053273314095229  0.818
2013 Dalrymple SA, Ko J, Sheoran I, Kaminskyj SG, Sanders DA. Elucidation of substrate specificity in Aspergillus nidulans UDP-galactose-4-epimerase. Plos One. 8: e76803. PMID 24116166 DOI: 10.1371/Journal.Pone.0076803  0.798
2013 van Straaten KE, Ko JB, Jagdhane R, Anjum S, Palmer DR, Sanders DA. The structure of NtdA, a sugar aminotransferase involved in the kanosamine biosynthetic pathway in Bacillus subtilis, reveals a new subclass of aminotransferases. The Journal of Biological Chemistry. 288: 34121-30. PMID 24097983 DOI: 10.1074/Jbc.M113.500637  0.803
2013 Zheng H, Bertwistle D, Sanders DA, Palmer DR. Converting NAD-specific inositol dehydrogenase to an efficient NADP-selective catalyst, with a surprising twist. Biochemistry. 52: 5876-83. PMID 23952058 DOI: 10.1021/Bi400821S  0.807
2013 Vetter ND, Langill DM, Anjum S, Boisvert-Martel J, Jagdhane RC, Omene E, Zheng H, van Straaten KE, Asiamah I, Krol ES, Sanders DA, Palmer DR. A previously unrecognized kanosamine biosynthesis pathway in Bacillus subtilis. Journal of the American Chemical Society. 135: 5970-3. PMID 23586652 DOI: 10.1021/Ja4010255  0.756
2012 van Straaten KE, Routier FH, Sanders DA. Towards the crystal structure elucidation of eukaryotic UDP-galactopyranose mutase. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 68: 455-9. PMID 22505419 DOI: 10.1107/S1744309112006914  0.778
2012 van Straaten KE, Routier FH, Sanders DA. Structural insight into the unique substrate binding mechanism and flavin redox state of UDP-galactopyranose mutase from Aspergillus fumigatus. The Journal of Biological Chemistry. 287: 10780-90. PMID 22334662 DOI: 10.1074/jbc.M111.322974  0.801
2011 Karunan Partha S, Sadeghi-Khomami A, Cren S, Robinson RI, Woodward S, Slowski K, Berast L, Zheng B, Thomas NR, Sanders DA. Identification of Novel Inhibitors of UDP-Galactopyranose Mutase by Structure-Based Virtual Screening. Molecular Informatics. 30: 873-83. PMID 27468107 DOI: 10.1002/Minf.201100085  0.432
2011 Dalrymple SA, Sheoran I, Kaminskyj SG, Sanders DA. Preliminary X-ray crystallographic studies of UDP-glucose-4-epimerase from Aspergillus nidulans. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 885-7. PMID 21821886 DOI: 10.1107/S1744309111020914  0.784
2011 Afroz S, El-Ganiny AM, Sanders DA, Kaminskyj SG. Roles of the Aspergillus nidulans UDP-galactofuranose transporter, UgtA in hyphal morphogenesis, cell wall architecture, conidiation, and drug sensitivity. Fungal Genetics and Biology : Fg & B. 48: 896-903. PMID 21693196 DOI: 10.1016/J.Fgb.2011.06.001  0.304
2011 Obiero J, Sanders DA. Design of Deinococcus radiodurans thioredoxin reductase with altered thioredoxin specificity using computational alanine mutagenesis. Protein Science : a Publication of the Protein Society. 20: 1021-9. PMID 21465613 DOI: 10.1002/Pro.635  0.771
2011 Dalrymple S, Ko J, Sheoran I, Sanders D. Functional characterization of UDP-glucose-4-epimerase fromAspergillus nidulans Acta Crystallographica Section a Foundations of Crystallography. 67: C298-C298. DOI: 10.1107/S0108767311092543  0.731
2010 Partha SK, Sadeghi-Khomami A, Slowski K, Kotake T, Thomas NR, Jakeman DL, Sanders DA. Chemoenzymatic synthesis, inhibition studies, and X-ray crystallographic analysis of the phosphono analog of UDP-Galp as an inhibitor and mechanistic probe for UDP-galactopyranose mutase. Journal of Molecular Biology. 403: 578-90. PMID 20850454 DOI: 10.1016/J.Jmb.2010.08.053  0.813
2010 van Straaten KE, Zheng H, Palmer DR, Sanders DA. Structural investigation of myo-inositol dehydrogenase from Bacillus subtilis: implications for catalytic mechanism and inositol dehydrogenase subfamily classification. The Biochemical Journal. 432: 237-47. PMID 20809899 DOI: 10.1042/Bj20101079  0.81
2010 Borrelli S, Zandberg WF, Mohan S, Ko M, Martinez-Gutierrez F, Partha SK, Sanders DA, Av-Gay Y, Pinto BM. Antimycobacterial activity of UDP-galactopyranose mutase inhibitors. International Journal of Antimicrobial Agents. 36: 364-8. PMID 20678902 DOI: 10.1016/J.Ijantimicag.2010.06.030  0.754
2010 Protsko C, Vieille C, Laivenieks M, Prasad L, Sanders DA, Delbaere LT. Crystallization and preliminary X-ray diffraction analysis of the Thermoanaerobacter ethanolicus secondary alcohol dehydrogenase I86A mutant. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 66: 831-3. PMID 20606285 DOI: 10.1107/S1744309110018981  0.349
2010 Sadeghi-Khomami A, Forcada TJ, Wilson C, Sanders DA, Thomas NR. The UDP-Galp mutase catalyzed isomerization: synthesis and evaluation of 1,4-anhydro-beta-D-galactopyranose and its [2.2.2] methylene homologue. Organic & Biomolecular Chemistry. 8: 1596-602. PMID 20237670 DOI: 10.1039/B917409E  0.331
2010 El-Ganiny AM, Sheoran I, Sanders DA, Kaminskyj SG. Aspergillus nidulans UDP-glucose-4-epimerase UgeA has multiple roles in wall architecture, hyphal morphogenesis, and asexual development. Fungal Genetics and Biology : Fg & B. 47: 629-35. PMID 20211750 DOI: 10.1016/J.Fgb.2010.03.002  0.322
2010 Fang M, Toogood RD, Macova A, Ho K, Franzblau SG, McNeil MR, Sanders DA, Palmer DR. Succinylphosphonate esters are competitive inhibitors of MenD that show active-site discrimination between homologous alpha-ketoglutarate-decarboxylating enzymes. Biochemistry. 49: 2672-9. PMID 20199062 DOI: 10.1021/Bi901432D  0.436
2010 Obiero J, Pittet V, Bonderoff SA, Sanders DA. Thioredoxin system from Deinococcus radiodurans. Journal of Bacteriology. 192: 494-501. PMID 19933368 DOI: 10.1128/Jb.01046-09  0.79
2009 Partha SK, van Straaten KE, Sanders DA. Structural basis of substrate binding to UDP-galactopyranose mutase: crystal structures in the reduced and oxidized state complexed with UDP-galactopyranose and UDP. Journal of Molecular Biology. 394: 864-77. PMID 19836401 DOI: 10.1016/J.Jmb.2009.10.013  0.784
2009 van Straaten KE, Gonzalez CF, Valladares RB, Xu X, Savchenko AV, Sanders DA. The structure of a putative S-formylglutathione hydrolase from Agrobacterium tumefaciens. Protein Science : a Publication of the Protein Society. 18: 2196-202. PMID 19653299 DOI: 10.1002/Pro.216  0.79
2009 Karunan Partha S, Bonderoff SA, van Straaten KE, Sanders DA. Expression, purification and preliminary X-ray crystallographic analysis of UDP-galactopyranose mutase from Deinococcus radiodurans. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 65: 843-5. PMID 19652355 DOI: 10.1107/S1744309109027754  0.779
2009 van Straaten KE, Langill DM, Palmer DR, Sanders DA. Purification, crystallization and preliminary X-ray analysis of NtdA, a putative pyridoxal phosphate-dependent aminotransferase from Bacillus subtilis. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 65: 426-9. PMID 19342798 DOI: 10.1107/S1744309109009038  0.423
2009 Yao X, Bleile DW, Yuan Y, Chao J, Sarathy KP, Sanders DA, Pinto BM, O'Neill MA. Substrate directs enzyme dynamics by bridging distal sites: UDP-galactopyranose mutase. Proteins. 74: 972-9. PMID 18767162 DOI: 10.1002/Prot.22206  0.427
2008 El-Ganiny AM, Sanders DA, Kaminskyj SG. Aspergillus nidulans UDP-galactopyranose mutase, encoded by ugmA plays key roles in colony growth, hyphal morphogenesis, and conidiation. Fungal Genetics and Biology : Fg & B. 45: 1533-42. PMID 18935967 DOI: 10.1016/J.Fgb.2008.09.008  0.302
2008 Yuan Y, Bleile DW, Wen X, Sanders DA, Itoh K, Liu HW, Pinto BM. Investigation of binding of UDP-Galf and UDP-[3-F]Galf to UDP-galactopyranose mutase by STD-NMR spectroscopy, molecular dynamics, and CORCEMA-ST calculations. Journal of the American Chemical Society. 130: 3157-68. PMID 18278916 DOI: 10.1021/Ja7104152  0.37
2008 Van Straaten KE, Hoffort A, Palmer DR, Sanders DA. Purification, crystallization and preliminary X-ray analysis of inositol dehydrogenase (IDH) from Bacillus subtilis. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 64: 98-101. PMID 18259059 DOI: 10.1107/S1744309108000328  0.436
2008 Yang Y, El-Ganiny AM, Bray GE, Sanders DA, Kaminskyj SG. Aspergillus nidulans hypB encodes a Sec7-domain protein important for hyphal morphogenesis. Fungal Genetics and Biology : Fg & B. 45: 749-59. PMID 18248749 DOI: 10.1016/J.Fgb.2007.11.005  0.336
2007 Daniellou R, Zheng H, Langill DM, Sanders DA, Palmer DR. Probing the promiscuous active site of myo-inositol dehydrogenase using synthetic substrates, homology modeling, and active site modification. Biochemistry. 46: 7469-77. PMID 17539607 DOI: 10.1021/Bi700281X  0.413
2007 Chad JM, Sarathy KP, Gruber TD, Addala E, Kiessling LL, Sanders DA. Site-directed mutagenesis of UDP-galactopyranose mutase reveals a critical role for the active-site, conserved arginine residues. Biochemistry. 46: 6723-32. PMID 17511471 DOI: 10.1021/Bi7002795  0.482
2007 Sieminska EA, Xu X, Savchenko A, Sanders DA. The X-ray crystal structure of PA1607 from Pseudomonas aureginosa at 1.9 A resolution--a putative transcription factor. Protein Science : a Publication of the Protein Society. 16: 543-9. PMID 17322537 DOI: 10.1110/Ps.062668207  0.397
2006 Alvarado J, Ghosh A, Janovitz T, Jauregui A, Hasson MS, Sanders DA. Origin of exopolyphosphatase processivity: Fusion of an ASKHA phosphotransferase and a cyclic nucleotide phosphodiesterase homolog. Structure (London, England : 1993). 14: 1263-72. PMID 16905100 DOI: 10.1016/J.Str.2006.06.009  0.354
2006 Obiero J, Bonderoff SA, Goertzen MM, Sanders DA. Expression, purification, crystallization and preliminary X-ray crystallographic studies of Deinococcus radiodurans thioredoxin reductase. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 757-60. PMID 16880549 DOI: 10.1107/S1744309106024845  0.796
2005 Sieminska EA, Macova A, Palmer DR, Sanders DA. Crystallization and preliminary X-ray analysis of (1R,6R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) synthase (MenD) from Escherichia coli. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 61: 489-92. PMID 16511076 DOI: 10.1107/S1744309105010997  0.422
2005 Yuan Y, Wen X, Sanders DA, Pinto BM. Exploring the mechanism of binding of UDP-galactopyranose to UDP-galactopyranose mutase by STD-NMR spectroscopy and molecular modeling. Biochemistry. 44: 14080-9. PMID 16245924 DOI: 10.1021/Bi0513406  0.421
2005 Sanders DA, Walker JR, Skarina T, Savchenko A. The X-ray crystal structure of PA3566 from Pseudomonas aureginosa at 1.8 A resolution. Proteins. 61: 209-12. PMID 16049913 DOI: 10.1002/Prot.20503  0.381
2005 Beis K, Srikannathasan V, Liu H, Fullerton SW, Bamford VA, Sanders DA, Whitfield C, McNeil MR, Naismith JH. Crystal structures of Mycobacteria tuberculosis and Klebsiella pneumoniae UDP-galactopyranose mutase in the oxidised state and Klebsiella pneumoniae UDP-galactopyranose mutase in the (active) reduced state. Journal of Molecular Biology. 348: 971-82. PMID 15843027 DOI: 10.1016/J.Jmb.2005.02.057  0.668
2004 Veerapen N, Yuan Y, Sanders DA, Pinto BM. Synthesis of novel ammonium and selenonium ions and their evaluation as inhibitors of UDP-galactopyranose mutase. Carbohydrate Research. 339: 2205-17. PMID 15337448 DOI: 10.1016/J.Carres.2004.07.012  0.356
2003 Filson H, Fox A, Kelleher D, Windle HJ, Sanders DA. Purification, crystallization and preliminary X-ray analysis of an unusual thioredoxin from the gastric pathogen Helicobacter pylori. Acta Crystallographica. Section D, Biological Crystallography. 59: 1280-2. PMID 12832786 DOI: 10.1107/S0907444903009624  0.395
2003 Fullerton SW, Daff S, Sanders DA, Ingledew WJ, Whitfield C, Chapman SK, Naismith JH. Potentiometric analysis of UDP-galactopyranose mutase: stabilization of the flavosemiquinone by substrate. Biochemistry. 42: 2104-9. PMID 12590598 DOI: 10.1021/Bi027077F  0.584
2001 Sanders DA, McMahon SA, Leonard GL, Naismith JH. Molecular placement of experimental electron density: a case study on UDP-galactopyranose mutase. Acta Crystallographica. Section D, Biological Crystallography. 57: 1415-20. PMID 11567154 DOI: 10.1107/S0907444901009829  0.57
2001 Sanders DA, Moothoo DN, Raftery J, Howard AJ, Helliwell JR, Naismith JH. The 1.2 A resolution structure of the Con A-dimannose complex. Journal of Molecular Biology. 310: 875-84. PMID 11453694 DOI: 10.1006/Jmbi.2001.4806  0.658
1997 Andersen JF, Sanders DA, Gasdaska JR, Weichsel A, Powis G, Montfort WR. Human thioredoxin homodimers: regulation by pH, role of aspartate 60, and crystal structure of the aspartate 60 --> asparagine mutant. Biochemistry. 36: 13979-88. PMID 9369469 DOI: 10.1021/Bi971004S  0.658
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