| Year |
Citation |
Score |
| 2024 |
Nern A, Loesche F, Takemura SY, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC, Koskela S, Longden KD, Lu Z, Preibisch S, Qiu W, ... ... Funke J, et al. Connectome-driven neural inventory of a complete visual system. Biorxiv : the Preprint Server For Biology. PMID 38659887 DOI: 10.1101/2024.04.16.589741 |
0.348 |
|
| 2023 |
Heinrich L, Patton W, Bennett D, Ackerman D, Park G, Bogovic JA, Eckstein N, Petruncio A, Clements J, Pang S, Shan Xu C, Funke J, Korff W, Hess H, Lippincott-Schwartz J, et al. Towards Generalizable Organelle Segmentation in Volume Electron Microscopy. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 29: 975. PMID 37613645 DOI: 10.1093/micmic/ozad067.487 |
0.642 |
|
| 2023 |
Lin A, Yang R, Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Costa M, Eichler K, Bates AS, Eckstein N, Funke J, Jefferis GSXE, Murthy M. Network Statistics of the Whole-Brain Connectome of . Biorxiv : the Preprint Server For Biology. PMID 37547019 DOI: 10.1101/2023.07.29.551086 |
0.748 |
|
| 2023 |
Dorkenwald S, Matsliah A, Sterling AR, Schlegel P, Yu SC, McKellar CE, Lin A, Costa M, Eichler K, Yin Y, Silversmith W, Schneider-Mizell C, Jordan CS, Brittain D, Halageri A, ... ... Funke J, et al. Neuronal wiring diagram of an adult brain. Biorxiv : the Preprint Server For Biology. PMID 37425937 DOI: 10.1101/2023.06.27.546656 |
0.711 |
|
| 2023 |
Shiu PK, Sterne GR, Spiller N, Franconville R, Sandoval A, Zhou J, Simha N, Kang CH, Yu S, Kim JS, Dorkenwald S, Matsliah A, Schlegel P, Yu SC, McKellar CE, ... ... Funke J, et al. A leaky integrate-and-fire computational model based on the connectome of the entire adult brain reveals insights into sensorimotor processing. Biorxiv : the Preprint Server For Biology. PMID 37205514 DOI: 10.1101/2023.05.02.539144 |
0.751 |
|
| 2022 |
Sheridan A, Nguyen TM, Deb D, Lee WA, Saalfeld S, Turaga SC, Manor U, Funke J. Local shape descriptors for neuron segmentation. Nature Methods. PMID 36585455 DOI: 10.1038/s41592-022-01711-z |
0.714 |
|
| 2022 |
Zhu PP, Hung HF, Batchenkova N, Nixon-Abell J, Henderson J, Zheng P, Renvoisé B, Pang S, Xu CS, Saalfeld S, Funke J, Xie Y, Svara F, Hess HF, Blackstone C. Transverse endoplasmic reticulum expansion in hereditary spastic paraplegia corticospinal axons. Human Molecular Genetics. PMID 35348668 DOI: 10.1093/hmg/ddac072 |
0.613 |
|
| 2021 |
Heinrich L, Bennett D, Ackerman D, Park W, Bogovic J, Eckstein N, Petruncio A, Clements J, Pang S, Xu CS, Funke J, Korff W, Hess HF, Lippincott-Schwartz J, Saalfeld S, et al. Whole-cell organelle segmentation in volume electron microscopy. Nature. PMID 34616042 DOI: 10.1038/s41586-021-03977-3 |
0.671 |
|
| 2021 |
Buhmann J, Sheridan A, Malin-Mayor C, Schlegel P, Gerhard S, Kazimiers T, Krause R, Nguyen TM, Heinrich L, Lee WA, Wilson R, Saalfeld S, Jefferis GSXE, Bock DD, Turaga SC, ... ... Funke J, et al. Automatic detection of synaptic partners in a whole-brain Drosophila electron microscopy data set. Nature Methods. PMID 34168373 DOI: 10.1038/s41592-021-01183-7 |
0.726 |
|
| 2021 |
Phelps JS, Hildebrand DGC, Graham BJ, Kuan AT, Thomas LA, Nguyen TM, Buhmann J, Azevedo AW, Sustar A, Agrawal S, Liu M, Shanny BL, Funke J, Tuthill JC, Lee WA. Reconstruction of motor control circuits in adult Drosophila using automated transmission electron microscopy. Cell. PMID 33400916 DOI: 10.1016/j.cell.2020.12.013 |
0.416 |
|
| 2020 |
Kuan AT, Phelps JS, Thomas LA, Nguyen TM, Han J, Chen CL, Azevedo AW, Tuthill JC, Funke J, Cloetens P, Pacureanu A, Lee WA. Dense neuronal reconstruction through X-ray holographic nano-tomography. Nature Neuroscience. PMID 32929244 DOI: 10.1038/S41593-020-0704-9 |
0.535 |
|
| 2018 |
Plaza SM, Funke J. Analyzing Image Segmentation for Connectomics. Frontiers in Neural Circuits. 12: 102. PMID 30483069 DOI: 10.3389/Fncir.2018.00102 |
0.364 |
|
| 2018 |
Funke J, Tschopp FD, Grisaitis W, Sheridan A, Singh C, Saalfeld S, Turaga SC. Large Scale Image Segmentation with Structured Loss based Deep Learning for Connectome Reconstruction. Ieee Transactions On Pattern Analysis and Machine Intelligence. PMID 29993708 DOI: 10.1109/Tpami.2018.2835450 |
0.693 |
|
| 2017 |
Funke J, Klein J, Moreno-Noguer F, Cardona A, Cook M. TED: A Tolerant Edit Distance for Segmentation Evaluation. Methods (San Diego, Calif.). PMID 28108198 DOI: 10.1016/J.Ymeth.2016.12.013 |
0.54 |
|
| 2015 |
Kreshuk A, Funke J, Cardona A, Hamprecht FA. Who is talking to whom: Synaptic partner detection in anisotropic volumes of insect brain Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9349: 661-668. DOI: 10.1007/978-3-319-24553-9_81 |
0.522 |
|
| 2014 |
Funke J, Martel JN, Gerhard S, Andres B, CireÅŸan DC, Giusti A, Gambardella LM, Schmidhuber J, Pfister H, Cardona A, Cook M. Candidate sampling for neuron reconstruction from anisotropic electron microscopy volumes. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 17: 17-24. PMID 25333096 |
0.75 |
|
| 2014 |
Funke J, Martel JNP, Gerhard S, Andres B, Cire?an DC, Giusti A, Gambardella LM, Schmidhuber J, Pfister H, Cardona A, Cook M. Candidate sampling for neuron reconstruction from anisotropic electron microscopy volumes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 8673: 17-24. DOI: 10.1007/978-3-319-10404-1_3 |
0.735 |
|
| 2012 |
Funke J, Andres B, Hamprecht FA, Cardona A, Cook M. Efficient automatic 3D-reconstruction of branching neurons from em data Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 1004-1011. DOI: 10.1109/CVPR.2012.6247777 |
0.561 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2022 |
Baker CA, McKellar C, Pang R, Nern A, Dorkenwald S, Pacheco DA, Eckstein N, Funke J, Dickson BJ, Murthy M. Neural network organization for courtship-song feature detection in Drosophila. Current Biology : Cb. PMID 35793679 DOI: 10.1016/j.cub.2022.06.019 |
0.292 |
|
| 2023 |
Yamada D, Bushey D, Li F, Hibbard KL, Sammons M, Funke J, Litwin-Kumar A, Hige T, Aso Y. Hierarchical architecture of dopaminergic circuits enables second-order conditioning in . Elife. 12. PMID 36692262 DOI: 10.7554/eLife.79042 |
0.286 |
|
| 2022 |
Nguyen TM, Thomas LA, Rhoades JL, Ricchi I, Yuan XC, Sheridan A, Hildebrand DGC, Funke J, Regehr WG, Lee WA. Structured cerebellar connectivity supports resilient pattern separation. Nature. PMID 36418404 DOI: 10.1038/s41586-022-05471-w |
0.275 |
|
| 2020 |
Menschner A, Bloch H, Hensel S, Funke J. Lösungsansatz für das modulare, zustandsgesteuerte Labor und Technikum Chemie Ingenieur Technik. 92: 1253-1253. DOI: 10.1002/Cite.202055349 |
0.171 |
|
| 2022 |
Malin-Mayor C, Hirsch P, Guignard L, McDole K, Wan Y, Lemon WC, Kainmueller D, Keller PJ, Preibisch S, Funke J. Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations. Nature Biotechnology. PMID 36065022 DOI: 10.1038/s41587-022-01427-7 |
0.166 |
|
| 2024 |
Eckstein N, Bates AS, Champion A, Du M, Yin Y, Schlegel P, Lu AK, Rymer T, Finley-May S, Paterson T, Parekh R, Dorkenwald S, Matsliah A, Yu SC, McKellar C, ... ... Funke J, et al. Neurotransmitter classification from electron microscopy images at synaptic sites in Drosophila melanogaster. Cell. 187: 2574-2594.e23. PMID 38729112 DOI: 10.1016/j.cell.2024.03.016 |
0.12 |
|
| 2021 |
Lundberg E, Funke J, Uhlmann V, Gerlich D, Walter T, Carpenter A, Coehlo LP. Which image-based phenotypes are most promising for using AI to understand cellular functions and why? Cell Systems. 12: 384-387. PMID 34015259 DOI: 10.1016/j.cels.2021.04.012 |
0.112 |
|
| 2023 |
Nguyen TM, Thomas LA, Rhoades JL, Ricchi I, Yuan XC, Sheridan A, Hildebrand DGC, Funke J, Regehr WG, Lee WA. Publisher Correction: Structured cerebellar connectivity supports resilient pattern separation. Nature. PMID 36631615 DOI: 10.1038/s41586-023-05703-7 |
0.103 |
|
| 2019 |
Abbas A, Schneider I, Bollmann A, Funke J, Oehlmann J, Prasse C, Schulte-Oehlmann U, Seitz W, Ternes T, Weber M, Wesely H, Wagner M. What you extract is what you see: Optimising the preparation of water and wastewater samples for in vitro bioassays. Water Research. 152: 47-60. PMID 30660097 DOI: 10.1016/j.watres.2018.12.049 |
0.068 |
|
| 2021 |
Funke J, Prasse C, Dietrich C, Ternes TA. Ozonation products of zidovudine and thymidine in oxidative water treatment. Water Research X. 11: 100090. PMID 33604534 DOI: 10.1016/j.wroa.2021.100090 |
0.06 |
|
| 2016 |
Funke J, Prasse C, Ternes TA. Identification of transformation products of antiviral drugs formed during biological wastewater treatment and their occurrence in the urban water cycle. Water Research. 98: 75-83. PMID 27082694 DOI: 10.1016/j.watres.2016.03.045 |
0.037 |
|
| 2015 |
Funke J, Prasse C, Lütke Eversloh C, Ternes TA. Oxypurinol - A novel marker for wastewater contamination of the aquatic environment. Water Research. 74: 257-65. PMID 25753675 DOI: 10.1016/j.watres.2015.02.007 |
0.031 |
|
| Hide low-probability matches. |